BLASTX nr result

ID: Bupleurum21_contig00000045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000045
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278185.1| PREDICTED: uncharacterized protein LOC100266...   343   2e-92
ref|XP_002533511.1| conserved hypothetical protein [Ricinus comm...   340   9e-92
ref|XP_002300910.1| predicted protein [Populus trichocarpa] gi|2...   340   1e-91
ref|NP_001131970.1| COV1-like protein isoform 1 [Zea mays] gi|19...   339   3e-91
ref|NP_001044917.1| Os01g0867900 [Oryza sativa Japonica Group] g...   339   3e-91

>ref|XP_002278185.1| PREDICTED: uncharacterized protein LOC100266324 [Vitis vinifera]
           gi|296082545|emb|CBI21550.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score =  343 bits (879), Expect = 2e-92
 Identities = 165/204 (80%), Positives = 182/204 (89%)
 Frame = +1

Query: 1   STRKACYAVLQSWVSTKFMTGCVVLFPVAVXXXXXXXXXXXXDGFFSPIYERIGVEIFGL 180
           STRKAC   LQSWVS KFMTGCVVLFPVAV            DGFFSP+YER+G++IFGL
Sbjct: 37  STRKACCYFLQSWVSKKFMTGCVVLFPVAVTFFVTWWFIQFVDGFFSPLYERLGIDIFGL 96

Query: 181 GFITSLVFIFFVGIFASSWMGSTVFWLGEWFIKRMPFINNIYSASKQISAAISPDQNTTA 360
           GF+TSL+F+FFVG+F SSWMG+TVFWLGEWFIKRMPF+ +IYSASKQISAAISPDQNTTA
Sbjct: 97  GFVTSLLFVFFVGVFVSSWMGATVFWLGEWFIKRMPFVKHIYSASKQISAAISPDQNTTA 156

Query: 361 FKEVAIIRHPRLGEYAFGFITSTVVLQKENGDEELCSVYVPTNHLYIGDVFLVNSAEIIR 540
           FKEVAIIRHPR+GEYAFGFITSTV+LQKEN DEELCSV+VPTNHLYIGD+FLVNS EIIR
Sbjct: 157 FKEVAIIRHPRVGEYAFGFITSTVILQKENEDEELCSVFVPTNHLYIGDIFLVNSKEIIR 216

Query: 541 PNLSIREGIEIIVSVGMSMPQVIS 612
           PNLSIREGIEIIVS GM+MPQ I+
Sbjct: 217 PNLSIREGIEIIVSGGMTMPQTIA 240


>ref|XP_002533511.1| conserved hypothetical protein [Ricinus communis]
           gi|223526635|gb|EEF28880.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score =  340 bits (873), Expect = 9e-92
 Identities = 162/204 (79%), Positives = 183/204 (89%)
 Frame = +1

Query: 1   STRKACYAVLQSWVSTKFMTGCVVLFPVAVXXXXXXXXXXXXDGFFSPIYERIGVEIFGL 180
           STR+AC  +LQSWVS KFMTGCVVLFP+AV            DGFFSPIYER+G++IFGL
Sbjct: 37  STREACCFILQSWVSKKFMTGCVVLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIFGL 96

Query: 181 GFITSLVFIFFVGIFASSWMGSTVFWLGEWFIKRMPFINNIYSASKQISAAISPDQNTTA 360
           GF+TSLVF+FFVG+F SSW+GS VFWLGEWFIKRMPF+ ++YSASKQISAAI+PDQNTTA
Sbjct: 97  GFVTSLVFVFFVGVFVSSWIGSNVFWLGEWFIKRMPFVKHLYSASKQISAAIAPDQNTTA 156

Query: 361 FKEVAIIRHPRLGEYAFGFITSTVVLQKENGDEELCSVYVPTNHLYIGDVFLVNSAEIIR 540
           FKEVAIIRHPR+GEYAFGFITSTV+LQKEN DEELCSV+VPTNHLYIGD+FLVNS EIIR
Sbjct: 157 FKEVAIIRHPRVGEYAFGFITSTVILQKENEDEELCSVFVPTNHLYIGDIFLVNSKEIIR 216

Query: 541 PNLSIREGIEIIVSVGMSMPQVIS 612
           PNLSIREGIEIIVS GM+MPQ+I+
Sbjct: 217 PNLSIREGIEIIVSGGMTMPQMIT 240


>ref|XP_002300910.1| predicted protein [Populus trichocarpa] gi|222842636|gb|EEE80183.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  340 bits (872), Expect = 1e-91
 Identities = 163/204 (79%), Positives = 183/204 (89%)
 Frame = +1

Query: 1   STRKACYAVLQSWVSTKFMTGCVVLFPVAVXXXXXXXXXXXXDGFFSPIYERIGVEIFGL 180
           STRKACYAVLQSW S KFMTGCVVLFPVAV            DGFFSPIY  +G++IFGL
Sbjct: 37  STRKACYAVLQSWASKKFMTGCVVLFPVAVTFLVTWWFIQFVDGFFSPIYAHLGIDIFGL 96

Query: 181 GFITSLVFIFFVGIFASSWMGSTVFWLGEWFIKRMPFINNIYSASKQISAAISPDQNTTA 360
           GF+TS++FI F+GIFASSW+G+TVF +GEWFIKRMPF+ ++YSASKQIS+AISPDQNTTA
Sbjct: 97  GFVTSIIFILFIGIFASSWLGATVFLVGEWFIKRMPFVKHLYSASKQISSAISPDQNTTA 156

Query: 361 FKEVAIIRHPRLGEYAFGFITSTVVLQKENGDEELCSVYVPTNHLYIGDVFLVNSAEIIR 540
           FKEVAIIRHPR GEYAFGFITS++VLQ+ENGDEELCSVYVPTNHLYIGDVFLVNS EIIR
Sbjct: 157 FKEVAIIRHPRHGEYAFGFITSSLVLQRENGDEELCSVYVPTNHLYIGDVFLVNSEEIIR 216

Query: 541 PNLSIREGIEIIVSVGMSMPQVIS 612
           PNLSIREGIEIIVS+GM+MPQV+S
Sbjct: 217 PNLSIREGIEIIVSIGMTMPQVLS 240


>ref|NP_001131970.1| COV1-like protein isoform 1 [Zea mays] gi|194693066|gb|ACF80617.1|
           unknown [Zea mays] gi|194693894|gb|ACF81031.1| unknown
           [Zea mays] gi|195647116|gb|ACG43026.1| COV1-like protein
           [Zea mays] gi|414879522|tpg|DAA56653.1| TPA: COV1-like
           protein isoform 1 [Zea mays]
           gi|414879523|tpg|DAA56654.1| TPA: COV1-like protein
           isoform 2 [Zea mays] gi|414879524|tpg|DAA56655.1| TPA:
           COV1-like protein isoform 3 [Zea mays]
          Length = 258

 Score =  339 bits (869), Expect = 3e-91
 Identities = 163/204 (79%), Positives = 181/204 (88%)
 Frame = +1

Query: 1   STRKACYAVLQSWVSTKFMTGCVVLFPVAVXXXXXXXXXXXXDGFFSPIYERIGVEIFGL 180
           STRKAC AVLQSWVS KFMTGCVVLFPVAV            DGFFSP+Y +IG++IFGL
Sbjct: 37  STRKACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGL 96

Query: 181 GFITSLVFIFFVGIFASSWMGSTVFWLGEWFIKRMPFINNIYSASKQISAAISPDQNTTA 360
           GF+TS+VFIF VGIF SSW+GST+FW+GEWFIK+MPF+ +IYSASKQ+S AISPDQNTTA
Sbjct: 97  GFLTSMVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTA 156

Query: 361 FKEVAIIRHPRLGEYAFGFITSTVVLQKENGDEELCSVYVPTNHLYIGDVFLVNSAEIIR 540
           FKEVAIIRHPR+GEYAFGFITSTVVLQ + GDEELCSVYVPTNHLYIGD+FLVNS EIIR
Sbjct: 157 FKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIR 216

Query: 541 PNLSIREGIEIIVSVGMSMPQVIS 612
           PNLSIREGIEIIVS GM+MPQVI+
Sbjct: 217 PNLSIREGIEIIVSGGMTMPQVIA 240


>ref|NP_001044917.1| Os01g0867900 [Oryza sativa Japonica Group]
           gi|20160853|dbj|BAB89792.1| membrane protein COV-like
           [Oryza sativa Japonica Group]
           gi|113534448|dbj|BAF06831.1| Os01g0867900 [Oryza sativa
           Japonica Group] gi|125528506|gb|EAY76620.1| hypothetical
           protein OsI_04571 [Oryza sativa Indica Group]
           gi|125572770|gb|EAZ14285.1| hypothetical protein
           OsJ_04209 [Oryza sativa Japonica Group]
           gi|215692460|dbj|BAG87880.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 259

 Score =  339 bits (869), Expect = 3e-91
 Identities = 163/204 (79%), Positives = 181/204 (88%)
 Frame = +1

Query: 1   STRKACYAVLQSWVSTKFMTGCVVLFPVAVXXXXXXXXXXXXDGFFSPIYERIGVEIFGL 180
           STRKAC AVLQSWVS KFMTGCVVLFPVAV            DGFFSP+Y ++G++IFGL
Sbjct: 37  STRKACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKLGIDIFGL 96

Query: 181 GFITSLVFIFFVGIFASSWMGSTVFWLGEWFIKRMPFINNIYSASKQISAAISPDQNTTA 360
           GF+TSLVFIF VGIF SSW+GST+FW+GEWFIK+MPF+ +IYSASKQ+S AISPDQNTTA
Sbjct: 97  GFLTSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTA 156

Query: 361 FKEVAIIRHPRLGEYAFGFITSTVVLQKENGDEELCSVYVPTNHLYIGDVFLVNSAEIIR 540
           FKEVAIIRHPR+GEYAFGFITSTVVLQ + GDEELCSVYVPTNHLYIGD+FLVNS EIIR
Sbjct: 157 FKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIR 216

Query: 541 PNLSIREGIEIIVSVGMSMPQVIS 612
           PNLSIREGIEIIVS GM+MPQVI+
Sbjct: 217 PNLSIREGIEIIVSGGMTMPQVIA 240


Top