BLASTX nr result

ID: Bupleurum21_contig00000032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000032
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O22504.1|GLNA1_DAUCA RecName: Full=Glutamine synthetase cytos...   391   e-116
gb|ABK95973.1| unknown [Populus trichocarpa]                          362   e-108
ref|XP_002329715.1| predicted protein [Populus trichocarpa] gi|1...   360   e-107
ref|XP_002318305.1| predicted protein [Populus trichocarpa] gi|2...   358   e-107
ref|XP_002283171.1| PREDICTED: glutamine synthetase cytosolic is...   357   e-107

>sp|O22504.1|GLNA1_DAUCA RecName: Full=Glutamine synthetase cytosolic isozyme; AltName:
            Full=GS1; AltName: Full=Glutamate--ammonia ligase
            gi|2454629|gb|AAB71691.1| cytosolic glutamine synthetase
            [Daucus carota]
          Length = 352

 Score =  391 bits (1005), Expect(2) = e-116
 Identities = 191/213 (89%), Positives = 194/213 (91%)
 Frame = -1

Query: 1169 PAGEPLPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNWPIXXXXXXXXXXXXX 990
            PAGEP+PTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVN PI             
Sbjct: 96   PAGEPIPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNCPIGCPTGGYPGPQGP 155

Query: 989  XXXXXGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPAVGISAGDELWV 810
                 GADKAFGRDIVDAHYKACLYAG+NISGINGEVMPGQWEFQVGPAVGISAGDELWV
Sbjct: 156  YYCGIGADKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWV 215

Query: 809  ARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFELIKKAIAKLETK 630
            ARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFE+IKKAIAKLETK
Sbjct: 216  ARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFEIIKKAIAKLETK 275

Query: 629  HAQHIAAYGEGNERRLTGKHETASIHKFSWGVA 531
            HAQHIAAYGEGNERRLTGKHETASIHKFSWGVA
Sbjct: 276  HAQHIAAYGEGNERRLTGKHETASIHKFSWGVA 308



 Score = 56.6 bits (135), Expect(2) = e-116
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 423 GYFEDRRPASNMDPYVVTSMIAETTIL 343
           GYFEDRRPASNM+PYVVTSMIAETTIL
Sbjct: 326 GYFEDRRPASNMEPYVVTSMIAETTIL 352


>gb|ABK95973.1| unknown [Populus trichocarpa]
          Length = 356

 Score =  362 bits (928), Expect(2) = e-108
 Identities = 171/213 (80%), Positives = 186/213 (87%)
 Frame = -1

Query: 1169 PAGEPLPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNWPIXXXXXXXXXXXXX 990
            PAGEP+PTNKR NAAKIFSHPDV AEVPW+GIEQEYTLL+K++ WPI             
Sbjct: 97   PAGEPIPTNKRYNAAKIFSHPDVVAEVPWYGIEQEYTLLQKDLKWPIGWPVGGYPGPQGP 156

Query: 989  XXXXXGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPAVGISAGDELWV 810
                 GADKAFGRD+VD+HYKACLYAG+NISGINGEVMPGQWEFQVGP+VGISAGDELWV
Sbjct: 157  YYCGAGADKAFGRDVVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDELWV 216

Query: 809  ARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFELIKKAIAKLETK 630
            ARYILERITEIAGVVVS DPKPIPGDWNGAGAHTNYSTKSMRN+GGFE+IKKAI KL+ K
Sbjct: 217  ARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRNDGGFEVIKKAIGKLQLK 276

Query: 629  HAQHIAAYGEGNERRLTGKHETASIHKFSWGVA 531
            H +HIAAYGEGNERRLTG+HETA I+ FSWGVA
Sbjct: 277  HKEHIAAYGEGNERRLTGRHETADINTFSWGVA 309



 Score = 57.0 bits (136), Expect(2) = e-108
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 423 GYFEDRRPASNMDPYVVTSMIAETTIL 343
           GYFEDRRPASNMDPYVVTSMIA+TTIL
Sbjct: 327 GYFEDRRPASNMDPYVVTSMIADTTIL 353


>ref|XP_002329715.1| predicted protein [Populus trichocarpa] gi|118486146|gb|ABK94916.1|
            unknown [Populus trichocarpa] gi|222870623|gb|EEF07754.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  360 bits (924), Expect(2) = e-107
 Identities = 169/213 (79%), Positives = 186/213 (87%)
 Frame = -1

Query: 1169 PAGEPLPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNWPIXXXXXXXXXXXXX 990
            PAGEP+PTNKR +AAKIFSHPDV AEVPW+G+EQEYTLL+K++ WP+             
Sbjct: 97   PAGEPIPTNKRHSAAKIFSHPDVVAEVPWYGLEQEYTLLQKDLKWPLGWPVGGYPGPQGP 156

Query: 989  XXXXXGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPAVGISAGDELWV 810
                 GADKAFGRDIVD+HYKACLYAG+NISGINGEVMPGQWEFQVGP+VGISAGDELWV
Sbjct: 157  YYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDELWV 216

Query: 809  ARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFELIKKAIAKLETK 630
            ARYILERITEIAGVVVS DPKPIPGDWNGAGAHTNYSTKSMRN+GGFE+IKKAI KL+ +
Sbjct: 217  ARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRNDGGFEIIKKAIGKLQLR 276

Query: 629  HAQHIAAYGEGNERRLTGKHETASIHKFSWGVA 531
            H +HIAAYGEGNERRLTG+HETA IH FSWGVA
Sbjct: 277  HKEHIAAYGEGNERRLTGRHETADIHTFSWGVA 309



 Score = 57.8 bits (138), Expect(2) = e-107
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 423 GYFEDRRPASNMDPYVVTSMIAETTIL 343
           GYFEDRRPASNMDPY+VTSMIAETTIL
Sbjct: 327 GYFEDRRPASNMDPYIVTSMIAETTIL 353


>ref|XP_002318305.1| predicted protein [Populus trichocarpa] gi|222858978|gb|EEE96525.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  358 bits (920), Expect(2) = e-107
 Identities = 170/213 (79%), Positives = 185/213 (86%)
 Frame = -1

Query: 1169 PAGEPLPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNWPIXXXXXXXXXXXXX 990
            PAGEP+PTNKR NAAKIFSHPDV AEVPW+GIEQEYTLL+K++ WPI             
Sbjct: 97   PAGEPIPTNKRYNAAKIFSHPDVVAEVPWYGIEQEYTLLQKDLKWPIGWPVGGYPGPQGP 156

Query: 989  XXXXXGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPAVGISAGDELWV 810
                 GADKAFGRD+VD+HYKACLYAG+NISGINGEVMPGQWEFQVGP+VGISAGDELWV
Sbjct: 157  YYCGAGADKAFGRDVVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDELWV 216

Query: 809  ARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFELIKKAIAKLETK 630
            ARYILERITEIAGVVVS DPKPI GDWNGAGAHTNYSTKSMRN+GGFE+IKKAI KL+ K
Sbjct: 217  ARYILERITEIAGVVVSFDPKPIAGDWNGAGAHTNYSTKSMRNDGGFEVIKKAIGKLQLK 276

Query: 629  HAQHIAAYGEGNERRLTGKHETASIHKFSWGVA 531
            H +HIAAYGEGNERRLTG+HETA I+ FSWGVA
Sbjct: 277  HKEHIAAYGEGNERRLTGRHETADINTFSWGVA 309



 Score = 57.0 bits (136), Expect(2) = e-107
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 423 GYFEDRRPASNMDPYVVTSMIAETTIL 343
           GYFEDRRPASNMDPYVVTSMIA+TTIL
Sbjct: 327 GYFEDRRPASNMDPYVVTSMIADTTIL 353


>ref|XP_002283171.1| PREDICTED: glutamine synthetase cytosolic isozyme 1 [Vitis vinifera]
            gi|1707955|sp|P51118.1|GLNA1_VITVI RecName:
            Full=Glutamine synthetase cytosolic isozyme 1; AltName:
            Full=Glutamate--ammonia ligase gi|1134896|emb|CAA63981.1|
            glutamine synthetase [Vitis vinifera]
            gi|297734368|emb|CBI15615.3| unnamed protein product
            [Vitis vinifera]
          Length = 356

 Score =  357 bits (917), Expect(2) = e-107
 Identities = 170/213 (79%), Positives = 185/213 (86%)
 Frame = -1

Query: 1169 PAGEPLPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNWPIXXXXXXXXXXXXX 990
            PAGEP+PTNKRCNAAKIFSHPDVAAEVPW+GIEQEYTLL+KEV WPI             
Sbjct: 97   PAGEPIPTNKRCNAAKIFSHPDVAAEVPWYGIEQEYTLLQKEVKWPIGWPVGGFPGPQGP 156

Query: 989  XXXXXGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPAVGISAGDELWV 810
                 GADKA+GRDIVDAHYKACLYAG+NISGINGEVMPGQWE+QVGP+VGISAGDELWV
Sbjct: 157  YYCGIGADKAWGRDIVDAHYKACLYAGINISGINGEVMPGQWEYQVGPSVGISAGDELWV 216

Query: 809  ARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFELIKKAIAKLETK 630
            +RYILERITEIAGVV+S DPKPI GDWNGAGAHTNYSTKSMRN+GGFE+IKKAI KL  +
Sbjct: 217  SRYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGFEVIKKAIEKLGLR 276

Query: 629  HAQHIAAYGEGNERRLTGKHETASIHKFSWGVA 531
            H +HIAAYGEGNERRLTG+HETA I+ F WGVA
Sbjct: 277  HKEHIAAYGEGNERRLTGRHETADINTFLWGVA 309



 Score = 58.2 bits (139), Expect(2) = e-107
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = -3

Query: 423 GYFEDRRPASNMDPYVVTSMIAETTIL 343
           GYFEDRRPASNMDPYVVTSMIAETTIL
Sbjct: 327 GYFEDRRPASNMDPYVVTSMIAETTIL 353


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