BLASTX nr result

ID: Bupleurum21_contig00000025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000025
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA48410.1| light harvesting chlorophyll a /b binding protei...   280   1e-73
dbj|BAD97888.1| CAB homologue1 [Lemna paucicostata]                   279   1e-73
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso...   279   2e-73
emb|CAH59405.1| light harvesting protein 1 [Plantago major]           279   2e-73
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      278   2e-73

>emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
          Length = 193

 Score =  280 bits (715), Expect = 1e-73
 Identities = 137/139 (98%), Positives = 139/139 (100%)
 Frame = -1

Query: 417 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 238
           ELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR
Sbjct: 44  ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 103

Query: 237 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 58
           +AGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 104 IAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 163

Query: 57  KGPLENLADHLADPVNNNA 1
           KGPLENLADHLADPVNNNA
Sbjct: 164 KGPLENLADHLADPVNNNA 182


>dbj|BAD97888.1| CAB homologue1 [Lemna paucicostata]
          Length = 231

 Score =  279 bits (714), Expect = 1e-73
 Identities = 137/139 (98%), Positives = 139/139 (100%)
 Frame = -1

Query: 417 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 238
           ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR
Sbjct: 86  ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 145

Query: 237 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 58
           VAGGPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 146 VAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 205

Query: 57  KGPLENLADHLADPVNNNA 1
           KGPLENLADHLADPVNNNA
Sbjct: 206 KGPLENLADHLADPVNNNA 224


>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
          Length = 266

 Score =  279 bits (713), Expect = 2e-73
 Identities = 136/139 (97%), Positives = 139/139 (100%)
 Frame = -1

Query: 417 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 238
           ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV+LMGAVEGYR
Sbjct: 117 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYR 176

Query: 237 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 58
           VAGGPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 177 VAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236

Query: 57  KGPLENLADHLADPVNNNA 1
           KGPLENLADHLADPVNNNA
Sbjct: 237 KGPLENLADHLADPVNNNA 255


>emb|CAH59405.1| light harvesting protein 1 [Plantago major]
          Length = 229

 Score =  279 bits (713), Expect = 2e-73
 Identities = 138/139 (99%), Positives = 138/139 (99%)
 Frame = -1

Query: 417 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 238
           ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR
Sbjct: 80  ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 139

Query: 237 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 58
           VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 140 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 199

Query: 57  KGPLENLADHLADPVNNNA 1
           KGPLENLADHLADPVNNNA
Sbjct: 200 KGPLENLADHLADPVNNNA 218


>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  278 bits (712), Expect = 2e-73
 Identities = 136/139 (97%), Positives = 139/139 (100%)
 Frame = -1

Query: 417 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 238
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR
Sbjct: 117 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 176

Query: 237 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 58
           +AGGPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 177 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 236

Query: 57  KGPLENLADHLADPVNNNA 1
           KGPLENLADHLADPVNNNA
Sbjct: 237 KGPLENLADHLADPVNNNA 255


Top