BLASTX nr result

ID: Bupleurum21_contig00000024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000024
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH58000.1| chloroplast PsbO4 precursor [Nicotiana benthamiana]    370   e-100
gb|AFH57999.1| chloroplast PsbO3 precursor [Nicotiana benthamiana]    365   5e-99
ref|XP_002307234.1| hypothetical protein POPTRDRAFT_716206 [Popu...   365   5e-99
ref|XP_002522386.1| Oxygen-evolving enhancer protein 1, chloropl...   363   2e-98
gb|ABK96748.1| unknown [Populus trichocarpa x Populus deltoides]      363   3e-98

>gb|AFH58000.1| chloroplast PsbO4 precursor [Nicotiana benthamiana]
          Length = 333

 Score =  370 bits (950), Expect = e-100
 Identities = 190/273 (69%), Positives = 204/273 (74%), Gaps = 4/273 (1%)
 Frame = -3

Query: 808 KNIVHKCXXXXXXXXXXXXXXXXLVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCP 629
           K++  KC                +VSGA+AEGVPKRLTYDEIQSKTYMEVKGTGTANQCP
Sbjct: 56  KDLAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCP 115

Query: 628 TIENGTEAFAIKPGKYNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 458
           TI+ G E+FA KPGKYNA                                          
Sbjct: 116 TIDGGVESFAFKPGKYNAKKFCLEPTSFTVKAESVSKNAPPEFQKTKLMTRLTYTLDEIE 175

Query: 457 -PFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPDGFSGEFLVPS 281
            PFEVSPDGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPD FSGEFLVPS
Sbjct: 176 GPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPS 235

Query: 280 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENTKNTASSTGKITFTVTGTKPE 101
           YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN KNTASSTGKIT +VT +KPE
Sbjct: 236 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELEKENVKNTASSTGKITLSVTQSKPE 295

Query: 100 TGELIGVFESLQPSDTDLGAKVPKDVKIQGVWY 2
           TGE+IGVFES+QPSDTDLGAKVPKDVKIQG+WY
Sbjct: 296 TGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWY 328


>gb|AFH57999.1| chloroplast PsbO3 precursor [Nicotiana benthamiana]
          Length = 333

 Score =  365 bits (938), Expect = 5e-99
 Identities = 188/273 (68%), Positives = 203/273 (74%), Gaps = 4/273 (1%)
 Frame = -3

Query: 808 KNIVHKCXXXXXXXXXXXXXXXXLVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCP 629
           K++  KC                +VSGA+AEGVPKRLTYDEIQSKTYMEVKGTGTANQCP
Sbjct: 56  KDLAQKCTDAVKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCP 115

Query: 628 TIENGTEAFAIKPGKYNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 458
           TI+ G E+FA KPGKYNA                                          
Sbjct: 116 TIDGGVESFAFKPGKYNAKKFCLEPTSFTVKAESVSKNAPPEFQKTKLMTRLTYTLDEIE 175

Query: 457 -PFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPDGFSGEFLVPS 281
            PFEVSPDGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPD FSGEFLVPS
Sbjct: 176 GPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPS 235

Query: 280 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENTKNTASSTGKITFTVTGTKPE 101
           YRGSSFLDPKGRGGST YDNAVALPAGGRGDEEEL KEN KNTAS+TGKIT +VT +KPE
Sbjct: 236 YRGSSFLDPKGRGGSTVYDNAVALPAGGRGDEEELEKENVKNTASATGKITLSVTQSKPE 295

Query: 100 TGELIGVFESLQPSDTDLGAKVPKDVKIQGVWY 2
           TGE+IGVFES+QPSDTDLGAKVPKDVKIQG+WY
Sbjct: 296 TGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWY 328


>ref|XP_002307234.1| hypothetical protein POPTRDRAFT_716206 [Populus trichocarpa]
           gi|118487880|gb|ABK95762.1| unknown [Populus
           trichocarpa] gi|118488755|gb|ABK96188.1| unknown
           [Populus trichocarpa] gi|222856683|gb|EEE94230.1|
           hypothetical protein POPTRDRAFT_716206 [Populus
           trichocarpa]
          Length = 331

 Score =  365 bits (938), Expect = 5e-99
 Identities = 188/273 (68%), Positives = 202/273 (73%), Gaps = 4/273 (1%)
 Frame = -3

Query: 808 KNIVHKCXXXXXXXXXXXXXXXXLVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCP 629
           K++  KC                +VSGASAEGVPKRLTYDEIQSKTYMEVKG+GTANQCP
Sbjct: 55  KDLARKCVDASKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGSGTANQCP 114

Query: 628 TIENGTEAFAIKPGKYNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 458
           T++ G E+FA KPGKYNA                                          
Sbjct: 115 TLDGGAESFAFKPGKYNAKKFCLEPTSFTVKAESVSKNAPPEFQNTKLMTRLTYTLDEIE 174

Query: 457 -PFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPDGFSGEFLVPS 281
            PFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFT+KQL A+GKP+ FSGEFLVPS
Sbjct: 175 GPFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLAASGKPESFSGEFLVPS 234

Query: 280 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENTKNTASSTGKITFTVTGTKPE 101
           YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN KNTASSTGKIT +VT +KPE
Sbjct: 235 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELLKENIKNTASSTGKITLSVTKSKPE 294

Query: 100 TGELIGVFESLQPSDTDLGAKVPKDVKIQGVWY 2
           TGE+IGVFESLQPSDTDLGAK PKDVKIQG+WY
Sbjct: 295 TGEIIGVFESLQPSDTDLGAKTPKDVKIQGIWY 327


>ref|XP_002522386.1| Oxygen-evolving enhancer protein 1, chloroplast precursor, putative
           [Ricinus communis] gi|223538464|gb|EEF40070.1|
           Oxygen-evolving enhancer protein 1, chloroplast
           precursor, putative [Ricinus communis]
          Length = 334

 Score =  363 bits (932), Expect = 2e-98
 Identities = 186/273 (68%), Positives = 201/273 (73%), Gaps = 4/273 (1%)
 Frame = -3

Query: 808 KNIVHKCXXXXXXXXXXXXXXXXLVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCP 629
           K++  KC                +VSGASAEGVPKRLT+DEIQSKTYMEVKGTGTANQCP
Sbjct: 57  KDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTFDEIQSKTYMEVKGTGTANQCP 116

Query: 628 TIENGTEAFAIKPGKYNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 458
           TI+ G + F+ K GKYNA                                          
Sbjct: 117 TIDGGLDKFSFKAGKYNAKKFCLEPTSFTVKAESVNKNAPPEFQNTKLMTRLTYTLDEIE 176

Query: 457 -PFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPDGFSGEFLVPS 281
            PFEV PDGT+KFEEKDGIDYAAVTVQLPGGERVPFLFT+KQLVATGKP+ FSGEFLVPS
Sbjct: 177 GPFEVGPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVATGKPESFSGEFLVPS 236

Query: 280 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENTKNTASSTGKITFTVTGTKPE 101
           YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENTKN ASS GKIT +VTG+KPE
Sbjct: 237 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENTKNAASSVGKITLSVTGSKPE 296

Query: 100 TGELIGVFESLQPSDTDLGAKVPKDVKIQGVWY 2
           TGE+IGVFES+QPSDTDLGAK PKDVKIQG+WY
Sbjct: 297 TGEIIGVFESVQPSDTDLGAKTPKDVKIQGIWY 329


>gb|ABK96748.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 331

 Score =  363 bits (931), Expect = 3e-98
 Identities = 186/273 (68%), Positives = 201/273 (73%), Gaps = 4/273 (1%)
 Frame = -3

Query: 808 KNIVHKCXXXXXXXXXXXXXXXXLVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCP 629
           K++  KC                + SGASAEGVPKRLTYDEIQSKTYMEVKG+GTANQCP
Sbjct: 55  KDLAQKCVDASKIAGFALATSALIASGASAEGVPKRLTYDEIQSKTYMEVKGSGTANQCP 114

Query: 628 TIENGTEAFAIKPGKYNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 458
           T++ G E+FA KPGKYNA                                          
Sbjct: 115 TLDGGAESFAFKPGKYNAKKFCLEPTSFTVKAESVSKNAPPEFQNTKLMTRLTYTLDEIE 174

Query: 457 -PFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPDGFSGEFLVPS 281
            PFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFT+KQL A+GKP+ FSGEFLVPS
Sbjct: 175 GPFEVSPDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLAASGKPENFSGEFLVPS 234

Query: 280 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENTKNTASSTGKITFTVTGTKPE 101
           YRG+SFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN KNTASSTGKIT +VT +KPE
Sbjct: 235 YRGTSFLDPKGRGGSTGYDNAVALPAGGRGDEEELLKENIKNTASSTGKITLSVTKSKPE 294

Query: 100 TGELIGVFESLQPSDTDLGAKVPKDVKIQGVWY 2
           TGE+IGVFESLQPSDTDLGAK PKDVKIQG+WY
Sbjct: 295 TGEIIGVFESLQPSDTDLGAKTPKDVKIQGIWY 327


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