BLASTX nr result

ID: Atropa21_contig00043173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00043173
         (611 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001274879.1| uncharacterized protein LOC102577703 [Solanu...    55   1e-07
ref|XP_006352133.1| PREDICTED: uncharacterized protein LOC102596...    57   5e-06

>ref|NP_001274879.1| uncharacterized protein LOC102577703 [Solanum tuberosum]
           gi|83284013|gb|ABC01914.1| unknown [Solanum tuberosum]
          Length = 319

 Score = 55.1 bits (131), Expect(2) = 1e-07
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 10/68 (14%)
 Frame = +3

Query: 108 HLWQDLNQYWQSTEFKAKCELAKKARKSEKVGSLHIGGAVSTGIIIRKLD---------- 257
           H++ +L QYW + +FKA  + AK AR S K GSLH GGA + G I R+++          
Sbjct: 91  HVFNELGQYWNTDKFKAISDQAKMARGSLKGGSLHTGGAKTVGTIAREMEKELGRTPIEP 150

Query: 258 ELFLETHV 281
           E+F +THV
Sbjct: 151 EIFKKTHV 158



 Score = 26.9 bits (58), Expect(2) = 1e-07
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 281 KKEEEEVDSDQWIEARAEQ 337
           +K+E E D D W+E RAE+
Sbjct: 159 RKKENESDPDVWVEERAER 177


>ref|XP_006352133.1| PREDICTED: uncharacterized protein LOC102596447 [Solanum tuberosum]
          Length = 149

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
 Frame = +3

Query: 108 HLWQDLNQYWQSTEFKAKCELAKKARKSEKVGSLHIGGAVSTGIIIRKLD---------- 257
           H++ +L +YW + +FKA  + AK AR S K GSLH GGA + G I R+++          
Sbjct: 51  HVFDELGKYWNTDKFKAISDRAKMARGSFKGGSLHTGGAKTIGTIAREMEKELGRTPIEP 110

Query: 258 ELFLETHVXXXXXXSIQINGSRRGLNKLDSLKSRSLTPLIRILLR 392
           E+F +THV      S      RRG N+L       L  LI  LLR
Sbjct: 111 EVFKKTHVRKKENESDPDVWWRRGPNEL-------LMTLISTLLR 148


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