BLASTX nr result
ID: Atropa21_contig00043145
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00043145
(641 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 89 3e-26
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 79 3e-24
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 71 1e-21
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 48 5e-14
ref|XP_004253451.1| PREDICTED: putative ribonuclease H protein A... 62 9e-11
ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein A... 70 4e-10
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 67 4e-09
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 65 1e-08
ref|XP_004239566.1| PREDICTED: putative ribonuclease H protein A... 65 1e-08
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 65 2e-08
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 64 3e-08
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 63 6e-08
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 63 6e-08
ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262... 63 6e-08
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 63 6e-08
ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244... 62 1e-07
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 57 1e-07
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07
ref|XP_004234855.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 89.4 bits (220), Expect(3) = 3e-26
Identities = 38/76 (50%), Positives = 51/76 (67%)
Frame = +3
Query: 357 FSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSASR 536
F+VKSAWE +RHK+ER ++ +W K++PFK F LW WK ++ D L R+ IQ SR
Sbjct: 880 FTVKSAWELMRHKQERRTDYQLIWTKDVPFKMNFFLWRLWKRRIATDDNLKRMKIQIVSR 939
Query: 537 CWCCQNPK*ETMTYYF 584
CWCC + ETMT+ F
Sbjct: 940 CWCCSETEEETMTHIF 955
Score = 42.4 bits (98), Expect(3) = 3e-26
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 106 IKQGDFSFWFDNWTSLGTLYY-XXXXXXXXXXXXKKLSNIN**NVQK*RSQLPQEIVQHI 282
IK G+ SFWFDNWT G L+Y K ++ + +K +++ +E+ +I
Sbjct: 795 IKAGNSSFWFDNWTKQGALWYVEENNAVEEKIEVKYFTHQGAWDREKLLNKISEEMTDYI 854
Query: 283 VGTIPPPQQNVELDRTWCM 339
+ +I PP + D W M
Sbjct: 855 MESIKPPLEEYINDVAWWM 873
Score = 33.5 bits (75), Expect(3) = 3e-26
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 8 KGSPCVST*KRCIYDMKEMILIRDLVEHQIWWQLNKG 118
K P V+ + + ++MI +R+ VEH IWWQ+ G
Sbjct: 762 KMHPTVARGQGASHVWRKMITVREEVEHNIWWQIKAG 798
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 79.0 bits (193), Expect(3) = 3e-24
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = +3
Query: 357 FSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSASR 536
F+VKSAW+ R+K+E + + +W K LPFK F +W WK ++ D L ++ I SR
Sbjct: 503 FTVKSAWQITRNKQEVRRDCEVIWNKELPFKINFFMWRVWKRRIATDDNLKKMRINIVSR 562
Query: 537 CWCCQNPK*ETMTYYF 584
CWCC K ETMT+ F
Sbjct: 563 CWCCDRKKEETMTHLF 578
Score = 46.2 bits (108), Expect(3) = 3e-24
Identities = 26/78 (33%), Positives = 33/78 (42%)
Frame = +1
Query: 106 IKQGDFSFWFDNWTSLGTLYYXXXXXXXXXXXXKKLSNIN**NVQK*RSQLPQEIVQHIV 285
IK G+ SFWFDNWT G LY+ K+ + +K L E+ HI+
Sbjct: 419 IKAGNSSFWFDNWTKQGALYHIEENAKEEEVEVKEFCTGEGWDKEKLLQNLSLEMTDHIM 478
Query: 286 GTIPPPQQNVELDRTWCM 339
I PP D W M
Sbjct: 479 ENISPPNTLFGNDVVWWM 496
Score = 33.1 bits (74), Expect(3) = 3e-24
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 56 KEMILIRDLVEHQIWWQLNKG 118
+ MI IR+ VEH+IWWQ+ G
Sbjct: 402 RRMISIREEVEHEIWWQIKAG 422
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 70.9 bits (172), Expect(3) = 1e-21
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +3
Query: 357 FSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSASR 536
F+VKSA+ IR +KE E+ ++MW K +P K F LW W+ K+ D L R+ I S+
Sbjct: 474 FTVKSAYHRIRGRKEEEEWRRYMWIKGMPIKISFFLWRVWRRKIATYDNLKRMKIPVVSK 533
Query: 537 CWCCQNPK*ETMTY 578
C+CC+ + ETMT+
Sbjct: 534 CYCCKEGEMETMTH 547
Score = 45.4 bits (106), Expect(3) = 1e-21
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 106 IKQGDFSFWFDNWTSLGTLYYXXXXXXXXXXXXKKLSNIN-**NVQK*RSQLPQEIVQHI 282
IK G+ SFWFDNWT G LYY + N + K + L +E+V+HI
Sbjct: 389 IKAGNSSFWFDNWTRQGALYYTEGDCAQEEELEVQYFITNDGWDETKLKDLLSEEMVEHI 448
Query: 283 VGTIPPPQQNVELDRTW 333
+ I P +D+ W
Sbjct: 449 ILNIRPKTSEEGIDKAW 465
Score = 33.1 bits (74), Expect(3) = 1e-21
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 17 PCVST*KRCIYDMKEMILIRDLVEHQIWWQLNKG 118
P V+T ++MI IR+ VEH IWWQ+ G
Sbjct: 359 PVVATSLGASQVWRKMISIREEVEHDIWWQIKAG 392
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 48.1 bits (113), Expect(3) = 5e-14
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 136 DNWTSLGTLYYXXXXXXXXXXXX-KKLSNIN**NVQK*RSQLPQEIVQHIVGTIPPPQQN 312
D+ T+ G LYY K+ +N V K R L ++IVQHI+ TIP P +
Sbjct: 540 DSSTTQGALYYFSHETSQEEEIEVKEFANQQGWKVDKLRRWLSEDIVQHILKTIPSPTSD 599
Query: 313 VELDRTWCMMENIGSSVLR 369
LDRTW M+E G +++
Sbjct: 600 GILDRTWWMLEESGKFIVK 618
Score = 37.7 bits (86), Expect(3) = 5e-14
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 17 PCVST*KRCIYDMKEMILIRDLVEHQIWWQLNKG 118
P ++ K ++ MI IR+L+EHQIWWQ+ G
Sbjct: 506 PVIAQSKGASATLRTMIKIRELIEHQIWWQIKGG 539
Score = 37.4 bits (85), Expect(3) = 5e-14
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 345 EHRKFSVKSAWEYIRHKKEREKI 413
E KF VKSAWEY+R +KER KI
Sbjct: 611 ESGKFIVKSAWEYVRQRKERSKI 633
>ref|XP_004253451.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Solanum lycopersicum]
Length = 515
Score = 61.6 bits (148), Expect(2) = 9e-11
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 345 EHRKFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQ 524
EH KF+++SAWE IR K+ + + K +W K + FK F +W A + KLP + L + G +
Sbjct: 305 EHGKFTIRSAWEIIRKKRMADPVNKMIWHKQI-FKVNFFIWRALRNKLPTNESLLKFG-R 362
Query: 525 SASRCWCC 548
+ CWCC
Sbjct: 363 TEEECWCC 370
Score = 31.2 bits (69), Expect(2) = 9e-11
Identities = 23/88 (26%), Positives = 35/88 (39%)
Frame = +1
Query: 106 IKQGDFSFWFDNWTSLGTLYYXXXXXXXXXXXXKKLSNIN**NVQK*RSQLPQEIVQHIV 285
I GD +FW+DNW+ G + + N K R + E+V +I+
Sbjct: 226 INFGDCTFWWDNWSGEGAMANHSLISSLNNKKVSEFLTNGVWNEGKVRQNVSPELVPNIL 285
Query: 286 GTIPPPQQNVELDRTWCMMENIGSSVLR 369
TI Q+ + W M E G +R
Sbjct: 286 QTIIHFQEGITDTAIW-MPEEHGKFTIR 312
>ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Solanum lycopersicum]
Length = 451
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = +3
Query: 348 HRKFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQS 527
H KFS SAWE IR KK + + F +W ++PFK F+LW A K KLP + L IGI+
Sbjct: 338 HGKFSCHSAWEEIRSKKPKNRFFNLLWHNSIPFKASFLLWRAIKRKLPTNEKLTNIGIE- 396
Query: 528 ASRCWCC 548
S C+CC
Sbjct: 397 PSHCFCC 403
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 67.0 bits (162), Expect = 4e-09
Identities = 39/126 (30%), Positives = 59/126 (46%)
Frame = +3
Query: 246 KITATTGNSPTHSWYHTTSSAECRIGQDLVHDGEHRKFSVKSAWEYIRHKKEREKIFKFM 425
KI GN T W T S +F++ SAW+ IR K+ ++ I +
Sbjct: 1059 KINYQAGNIDTSIWTPTESG----------------QFTISSAWDSIRKKRNKDPINNII 1102
Query: 426 WPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSASRCWCCQNPK*ETMTYYF*PSYSCK 605
W K +PFK F +W A + KLP + L RIG ++ S C+CC N + + + K
Sbjct: 1103 WHKQIPFKVSFFIWRALRGKLPTNENLQRIG-KNLSDCYCCYNKGKDDINHILINGNFAK 1161
Query: 606 AMEKVY 623
+ K+Y
Sbjct: 1162 YIWKIY 1167
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +3
Query: 345 EHRKFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQ 524
E F++ SAWE IR+K+ + I +W K+LPFK F +W A K KLP ++L R G
Sbjct: 883 ETGNFTIASAWECIRNKRPIDTINTIIWHKHLPFKIAFFIWRALKGKLPTNELLQRFG-S 941
Query: 525 SASRCWCC 548
+ S+C+CC
Sbjct: 942 AISKCYCC 949
>ref|XP_004239566.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 606
Score = 65.5 bits (158), Expect = 1e-08
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +3
Query: 348 HRKFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQS 527
H +FS +AWE IR KK + K F+W K++PFK F+LW K KL D L GI+
Sbjct: 410 HGQFSCATAWEQIREKKAKNKFNSFLWQKSIPFKSSFLLWRTLKGKLSTNDKLANFGIE- 468
Query: 528 ASRCWCC 548
S C+CC
Sbjct: 469 PSPCYCC 475
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +3
Query: 345 EHRKFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQ 524
E+ KF++ SAWE IR KK + I +W K++PFK F +W A + KLP D L + G
Sbjct: 577 ENGKFTIASAWEVIRKKKSTDIINNSVWHKHIPFKISFFIWRALRGKLPTYDYLQKFG-S 635
Query: 525 SASRCWCC 548
+A+ C+CC
Sbjct: 636 NATDCYCC 643
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 64.3 bits (155), Expect = 3e-08
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = +3
Query: 357 FSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSASR 536
FSV SAW IR K+E KI K+ W +PFK F+LW A + KLP + L GI+ S
Sbjct: 873 FSVSSAWNSIREKREITKINKYTWHPKIPFKCSFLLWRAIRGKLPTNEKLLSFGIE-PSD 931
Query: 537 CWCCQNPK*ETMTY 578
C CC +P +T+ +
Sbjct: 932 CHCCHSPGIDTIEH 945
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 63.2 bits (152), Expect = 6e-08
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +3
Query: 354 KFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSAS 533
KFS SAWE IR+KK + + F+W +PFK F+LW K K+P + L GI+ S
Sbjct: 399 KFSCHSAWEEIRNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIE-PS 457
Query: 534 RCWCC 548
C+CC
Sbjct: 458 PCYCC 462
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 63.2 bits (152), Expect = 6e-08
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +3
Query: 354 KFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSAS 533
KFS SAWE IR+KK + + F+W +PFK F+LW K K+P + L GI+ S
Sbjct: 399 KFSCHSAWEEIRNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIE-PS 457
Query: 534 RCWCC 548
C+CC
Sbjct: 458 PCYCC 462
>ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum
lycopersicum]
Length = 764
Score = 63.2 bits (152), Expect = 6e-08
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +3
Query: 345 EHRKFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQ 524
E KFS+ SAW+ IR KK + I +W K +PFK F +W A K KLP D L G +
Sbjct: 564 ESGKFSIASAWDIIRRKKSTDYINTIIWHKYIPFKISFFIWRAIKGKLPTNDNLQIFG-K 622
Query: 525 SASRCWCC 548
A C+CC
Sbjct: 623 PAEECYCC 630
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 63.2 bits (152), Expect = 6e-08
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 357 FSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSASR 536
FS+ SAWE IR K+ + I +W K+LPFK F +W A K KLP + L RIG + S
Sbjct: 341 FSISSAWECIRKKRIIDNISTIIWNKHLPFKIAFFIWRALKGKLPTNEFLQRIG-SNISD 399
Query: 537 CWCC 548
C CC
Sbjct: 400 CSCC 403
>ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244169 [Solanum
lycopersicum]
Length = 764
Score = 62.4 bits (150), Expect = 1e-07
Identities = 30/68 (44%), Positives = 39/68 (57%)
Frame = +3
Query: 345 EHRKFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQ 524
E KFS+ SAW+ IR KK + I +W K +PFK F +W A + KLP D L G +
Sbjct: 564 ESGKFSIASAWDIIRRKKSTDYINTIIWHKYIPFKISFFIWRAIRGKLPTNDSLQIFG-K 622
Query: 525 SASRCWCC 548
A C+CC
Sbjct: 623 PAEECYCC 630
>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
lycopersicum]
Length = 1531
Score = 57.4 bits (137), Expect(2) = 1e-07
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +3
Query: 264 GNSPTHSWYHTTSSAECRIGQDLVHDGEHRKFSVKSAWEYIRHKKEREKIFKFMWPKNLP 443
GN ++ SS R+ D + D SAWE IR KK I +W +P
Sbjct: 1233 GNGAIANYCDNVSSLNNRVLADFLIDA--------SAWEVIRKKKSVNPINNIIWHNQIP 1284
Query: 444 FKFFFVLW*AWKFKLPNGDILNRIGIQSASRCWCC 548
FK F +W A + KLP + ++R GI +A C+CC
Sbjct: 1285 FKVAFFIWRALRGKLPTNEGVHRFGI-AAEDCYCC 1318
Score = 24.6 bits (52), Expect(2) = 1e-07
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 106 IKQGDFSFWFDNWTSLGTL 162
I G FW+DNW G +
Sbjct: 1219 INSGTSKFWWDNWLGNGAI 1237
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 62.0 bits (149), Expect = 1e-07
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +3
Query: 354 KFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSAS 533
KF++ SAW IR K + I +F+W KN+PFK F +W A + KLP D L G+
Sbjct: 635 KFTIHSAWNIIRKKNISDPINQFIWHKNIPFKVSFFIWKALRNKLPTNDSLMNFGMDE-Q 693
Query: 534 RCWCC 548
C+CC
Sbjct: 694 ECYCC 698
>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 601
Score = 62.0 bits (149), Expect = 1e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +3
Query: 354 KFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQSAS 533
KF++ SAW+ IR K+ + I +W K++PFK F +W A KLP +IL R+G +
Sbjct: 226 KFTISSAWKVIRKKRSHDPINNIIWHKHIPFKISFFIWGALTGKLPTNEILQRLG-RDIV 284
Query: 534 RCWCC 548
C+CC
Sbjct: 285 DCYCC 289
>ref|XP_004234855.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 440
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = +3
Query: 348 HRKFSVKSAWEYIRHKKEREKIFKFMWPKNLPFKFFFVLW*AWKFKLPNGDILNRIGIQS 527
H +FS SAWE IR KK + +W K++PFK F+LW K KLP + L GI+
Sbjct: 307 HGRFSCTSAWEEIRSKKAKNNFNSLIWHKSIPFKTSFLLWRTLKGKLPTNEKLFNFGIE- 365
Query: 528 ASRCWCC 548
S C+CC
Sbjct: 366 PSPCFCC 372