BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00043107
         (665 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   115   9e-36
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   111   3e-35
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   114   3e-35
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   118   1e-34
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   105   5e-34
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   124   6e-34
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   106   2e-33
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   102   4e-32
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   106   3e-31
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  106   2e-30
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                104   3e-30
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   105   2e-29
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             106   4e-29
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   109   5e-29
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   103   8e-29
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   104   8e-29
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    99   1e-28
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   104   1e-28
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           104   1e-28
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   102   1e-28

>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  115 bits (288), Expect(3) = 9e-36
 Identities = 59/156 (37%), Positives = 92/156 (58%)
 Frame = -1

Query: 476 KKVVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSH 297
           K +++A  +FS  TGL  N  K  +F  G+     Q + +ITG+ EG+  ++YLG+PLS 
Sbjct: 193 KMIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSC 252

Query: 296 KKWNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLEL 117
           KK N         KI  KIR  S++ LS A RIQ++ +I+ ++  +W  VF +P+ V++ 
Sbjct: 253 KKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQK 312

Query: 116 VDKKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
           +D  CR F+W  + + ++ SLVAW  VC P +  GL
Sbjct: 313 IDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGL 348



 Score = 42.4 bits (98), Expect(3) = 9e-36
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIML 589
           G+ QG P+SPLLFVL+MEYF+RIM+
Sbjct: 129 GIWQGDPISPLLFVLMMEYFNRIMV 153



 Score = 39.7 bits (91), Expect(3) = 9e-36
 Identities = 12/33 (36%), Positives = 25/33 (75%)
 Frame = -2

Query: 577 FRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           F  H  C++L +TH++F DD+ + C+G+++S++
Sbjct: 161 FNHHSQCERLGITHLSFADDVFLLCRGDKKSIK 193


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  111 bits (277), Expect(3) = 3e-35
 Identities = 62/159 (38%), Positives = 88/159 (55%)
 Frame = -1

Query: 485  SGKKKVVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLP 306
            S   K++ A   FS  +GL A+IEKS I+  GV     + L        GS   +YLG+P
Sbjct: 704  SSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVP 763

Query: 305  LSHKKWNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCV 126
            L+ KK N   C     KIT + +   A  LSYA R+Q++ TIL+S+ N+WG +F LP+ +
Sbjct: 764  LASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKL 823

Query: 125  LELVDKKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
            ++ V+  CR+FLW  T D    + VAW  +  PK   GL
Sbjct: 824  IKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGL 862



 Score = 46.2 bits (108), Expect(3) = 3e-35
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = -2

Query: 598 NNAKLSDFRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVEK 476
           N  K  +F  HP C+++KLTH+ F DDL++F + +  S+ K
Sbjct: 668 NMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISK 708



 Score = 38.5 bits (88), Expect(3) = 3e-35
 Identities = 18/26 (69%), Positives = 19/26 (73%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIMLN 586
           GLRQG P+SP LF L MEY SR M N
Sbjct: 643 GLRQGDPLSPFLFALSMEYLSRCMGN 668


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  114 bits (286), Expect(3) = 3e-35
 Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
 Frame = -1

Query: 470 VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
           ++ A + FS  TGL+ N +K S+  AG+    K+ +L ++G+ EG    KYLG+P++ KK
Sbjct: 92  MMRAYESFSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKK 151

Query: 290 WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
            + +       KI  KI+  +AR LSYA R+Q++N+++F+L N+W   F  P+ VL+ ++
Sbjct: 152 LSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIE 211

Query: 110 KKCREFLW-GNTEDQRKISLVAWANVCCPKKQTGL 9
             CR FLW G  E  RK S VAW  +C P+   GL
Sbjct: 212 AICRIFLWTGGFEGSRK-SPVAWKQICSPRSCGGL 245



 Score = 44.3 bits (103), Expect(3) = 3e-35
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = -2

Query: 589 KLSDFRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSV 482
           K  DF  HP C KLK+T++ F DDL++F +G++ SV
Sbjct: 54  KDGDFNYHPKCDKLKITNLCFADDLLLFSRGDKISV 89



 Score = 36.6 bits (83), Expect(3) = 3e-35
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG P+SP+LFV+VME  +R +
Sbjct: 26  GLRQGDPISPMLFVIVMECLNRYL 49


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score =  118 bits (295), Expect(3) = 1e-34
 Identities = 57/156 (36%), Positives = 90/156 (57%)
 Frame = -1

Query: 476 KKVVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSH 297
           K + +    FS  +GL AN+ KSSI+  GV   ++Q +++  GY       KYLG+PLS 
Sbjct: 512 KALQKCFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSS 571

Query: 296 KKWNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLEL 117
           KK N +  +    K+  +I + +A+ LSYA R Q++ T+LF +   W  +FI+P  +++L
Sbjct: 572 KKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKL 631

Query: 116 VDKKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
           ++  CR +LW       K +L+AW  VC PK + GL
Sbjct: 632 IEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGL 667



 Score = 37.7 bits (86), Expect(3) = 1e-34
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG P+SP LF + MEY SR++
Sbjct: 448 GLRQGDPMSPFLFAIAMEYLSRLL 471



 Score = 37.7 bits (86), Expect(3) = 1e-34
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 577 FRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           F+ HP   KL +TH+ F DDL++F +G+  S++
Sbjct: 480 FKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIK 512


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  105 bits (263), Expect(3) = 5e-34
 Identities = 54/154 (35%), Positives = 86/154 (55%)
 Frame = -1

Query: 470 VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
           ++  I  FSA TGLV N  K  I+  GV  + K  + +I+ Y EG   ++YLG+PL+ KK
Sbjct: 534 MLHVINKFSATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEEGQLPVRYLGVPLTSKK 593

Query: 290 WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
            N         KIT +IR  +++ L+   R+Q++N  + ++  FW     +P  V++ +D
Sbjct: 594 LNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKID 653

Query: 110 KKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
             CR F+W  + +  + S +AW +VC PK Q GL
Sbjct: 654 SMCRSFVWSRSTEITRKSPIAWNSVCRPKGQGGL 687



 Score = 45.8 bits (107), Expect(3) = 5e-34
 Identities = 17/34 (50%), Positives = 26/34 (76%)
 Frame = -2

Query: 580 DFRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           +F  H  C+KL +TH+TF DD+++FC+G+  SVE
Sbjct: 499 NFNHHAKCEKLGITHLTFADDVLLFCRGDVMSVE 532



 Score = 40.0 bits (92), Expect(3) = 5e-34
 Identities = 15/25 (60%), Positives = 23/25 (92%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIML 589
           G+RQG P+SPLLFV++MEY +R+++
Sbjct: 468 GIRQGDPISPLLFVVMMEYLNRLLV 492


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  124 bits (310), Expect(3) = 6e-34
 Identities = 63/161 (39%), Positives = 99/161 (61%)
 Frame = -1

Query: 491  AISGKKKVVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLG 312
            ++ G K V+E+   F  ++GL  N EKS+++ AG+ D+ K+  L   G+V G+F  +YLG
Sbjct: 710  SLRGIKSVLES---FKNLSGLEMNTEKSAVYTAGLEDTDKEDTLAF-GFVNGTFPFRYLG 765

Query: 311  LPLSHKKWNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQ 132
            LPL H+K  + D  Q   KI  +    + + LS+A R+Q+I+++++S  NFW   FILP+
Sbjct: 766  LPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPK 825

Query: 131  CVLELVDKKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
            C L+ +++ C  FLWGN   +R    V+W N C PK + GL
Sbjct: 826  CCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGL 866



 Score = 36.6 bits (83), Expect(3) = 6e-34
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIMLN 586
           GLRQG P+SP LFV+ ME  SR++ N
Sbjct: 648 GLRQGDPLSPSLFVIAMEILSRLLEN 673



 Score = 30.8 bits (68), Expect(3) = 6e-34
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 589 KLSDFRI--HPMCKKLKLTHMTFGDDLMIFCKGNEQSV 482
           K SD  I  HP   +++++ + F DDLMIF  G   S+
Sbjct: 674 KFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSL 711


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  106 bits (264), Expect(3) = 2e-33
 Identities = 57/150 (38%), Positives = 84/150 (56%)
 Frame = -1

Query: 461  AIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKKWNK 282
            A Q FS  +GL A+ EKS+I+  GV D   + L        G    +YLG+PL+ KK   
Sbjct: 709  AFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTY 768

Query: 281  MDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVDKKC 102
              C      IT + +   A+ LSYA R+Q+I +IL S+ N+W  +F L + V++ V+K C
Sbjct: 769  AQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVC 828

Query: 101  REFLWGNTEDQRKISLVAWANVCCPKKQTG 12
            R+FLW    ++ K + VAWA +  PK + G
Sbjct: 829  RKFLWTGKTEETKKAPVAWATIQRPKSRGG 858



 Score = 46.6 bits (109), Expect(3) = 2e-33
 Identities = 15/34 (44%), Positives = 26/34 (76%)
 Frame = -2

Query: 580 DFRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           DF  HP C++L +TH+ F DDL++FC+ ++ S++
Sbjct: 671 DFNFHPKCERLNITHLMFADDLLMFCRADKSSLD 704



 Score = 37.0 bits (84), Expect(3) = 2e-33
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG P+SP LF L MEY SR +
Sbjct: 640 GLRQGDPMSPFLFALCMEYLSRCL 663


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  102 bits (253), Expect(3) = 4e-32
 Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
 Frame = -1

Query: 470 VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
           +++    F    GL  N  K +I+   V  ++K+ LL I+G+ EG    +YLG+PLS KK
Sbjct: 534 MLDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKK 593

Query: 290 WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
            N         KI  +I   SA  LSYA R+Q+I +++F+  NFW     LP+ V+  ++
Sbjct: 594 LNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRIN 653

Query: 110 KKCREFLW-GNTEDQRKISLVAWANVCCPKKQTGL 9
             CR FLW GN+   RK S +AW  VC PK   GL
Sbjct: 654 AICRSFLWIGNSNISRK-SPIAWEKVCSPKINGGL 687



 Score = 42.4 bits (98), Expect(3) = 4e-32
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           G+RQG P+SPLLF+LVMEY +RI+
Sbjct: 468 GIRQGDPISPLLFILVMEYLNRIL 491



 Score = 40.8 bits (94), Expect(3) = 4e-32
 Identities = 15/37 (40%), Positives = 27/37 (72%)
 Frame = -2

Query: 589 KLSDFRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           K+ +F  H  C+K+K+T++ F DDL++F +G+  SV+
Sbjct: 496 KIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQ 532


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  106 bits (264), Expect(3) = 3e-31
 Identities = 52/152 (34%), Positives = 89/152 (58%)
 Frame = -1

Query: 464  EAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKKWN 285
            +A   F +++ L AN+ +S IF+AGV  +    +L++T +  G+  ++YLG+PL   K  
Sbjct: 545  DAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLR 604

Query: 284  KMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVDKK 105
              DC     +I  +I++   + LS+A R+Q+I ++L S+  +W    ILP+ VL+ ++K+
Sbjct: 605  MQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKR 664

Query: 104  CREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
             R FLW      R  + VAW+ +C PK + GL
Sbjct: 665  LRCFLWAGNCSGRAATKVAWSEICLPKCEGGL 696



 Score = 43.1 bits (100), Expect(3) = 3e-31
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = -2

Query: 577 FRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSV 482
           FR H  C +L L+H+ F DDL++FC G+E SV
Sbjct: 509 FRYHWRCDQLNLSHLCFADDLLMFCNGDENSV 540



 Score = 32.7 bits (73), Expect(3) = 3e-31
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM---LNC 583
           GLRQG P+SP LFV+ ME  S  +   +NC
Sbjct: 476 GLRQGDPLSPYLFVIAMEVLSLCIQRRINC 505


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  106 bits (265), Expect(3) = 2e-30
 Identities = 52/155 (33%), Positives = 86/155 (55%)
 Frame = -1

Query: 473 KVVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHK 294
           +V   +  FS  +GL  N EK+ IF+ G+  +    L  + G+  G   ++YLG+ LS  
Sbjct: 167 EVKNTLDSFSRASGLYLNTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPV 226

Query: 293 KWNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELV 114
           +  K D      ++  KI + + R+LSYA R+Q++ T+++ + N WG++F+LP+   + V
Sbjct: 227 RLTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQLVGTVIYGMVNAWGMIFMLPKFFTKQV 286

Query: 113 DKKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
           D+ C  FLWG     R    V+W   C P+K+ GL
Sbjct: 287 DRLCAGFLWGAGTTHR----VSWDTCCRPRKEGGL 317



 Score = 36.6 bits (83), Expect(3) = 2e-30
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 583 SDFRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVEKKK 470
           S   +HP C    +TH+ F DD+MIF  G  +S+ + K
Sbjct: 132 SRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVK 169



 Score = 36.2 bits (82), Expect(3) = 2e-30
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIMLNC 583
           GLRQG P+SP LF++ ME  SR++  C
Sbjct: 102 GLRQGDPLSPYLFIMSMEVLSRMLDRC 128


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  104 bits (259), Expect(3) = 3e-30
 Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
 Frame = -1

Query: 488 ISGKKKVVEAI----QYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIK 321
           I G+++ VE +    + F+  +GL  ++EKS++++AGV++  +  +L    +  G   ++
Sbjct: 284 IDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVR 343

Query: 320 YLGLPLSHKKWNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFI 141
           YLGLPL  K+    D      K+  KI + +AR LSYA R+ +IN+++ SL NFW   + 
Sbjct: 344 YLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYR 403

Query: 140 LPQCVLELVDKKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
           LP   ++ ++K C  FLW   E   K + + W ++C  K++ GL
Sbjct: 404 LPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGL 447



 Score = 47.4 bits (111), Expect(3) = 3e-30
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -2

Query: 568 HPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           HP CKKL LTH+ F DDLM+F  G ++SVE
Sbjct: 263 HPKCKKLSLTHLCFADDLMVFIDGQQRSVE 292



 Score = 26.9 bits (58), Expect(3) = 3e-30
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG  +SP LFV+ M   S ++
Sbjct: 228 GLRQGCALSPYLFVICMNVLSHMI 251


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  105 bits (262), Expect(3) = 2e-29
 Identities = 52/154 (33%), Positives = 91/154 (59%)
 Frame = -1

Query: 470 VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
           +VE +  F+  +GL  N+EK++++ AGV+D  +  ++    +  G   ++YLGLPL  K+
Sbjct: 126 IVEVMNLFAKRSGLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKR 185

Query: 290 WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
             K D      +I  +I   ++R+LS+A R+ +I+++L+S  NFW   F LP   L+ ++
Sbjct: 186 LTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEIN 245

Query: 110 KKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
             C  FLW   E  R+ + V+W ++C PK++ GL
Sbjct: 246 SICSAFLWSGPELHRRKAKVSWDDICKPKQEGGL 279



 Score = 41.6 bits (96), Expect(3) = 2e-29
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = -2

Query: 577 FRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           F  HP CK L LTH+ F DDLMI   G  +SV+
Sbjct: 92  FGFHPKCKNLGLTHLCFADDLMILTDGKVRSVD 124



 Score = 28.9 bits (63), Expect(3) = 2e-29
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           G+RQG  +SP LFV+ ME  S+++
Sbjct: 60  GIRQGCALSPYLFVISMEVLSKML 83


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  106 bits (264), Expect(3) = 4e-29
 Identities = 54/154 (35%), Positives = 87/154 (56%)
 Frame = -1

Query: 470 VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
           +VE    F+  +GL  ++EKS+I++AGVT+ +   +     +  G   ++YLGLPL  K+
Sbjct: 248 IVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKR 307

Query: 290 WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
               D       I +KI   + R+LSYA R+ +I ++L+S+ NFW   F LP+  +  +D
Sbjct: 308 LTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREID 367

Query: 110 KKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
           K C  FLW   +   + + V W +VC PK++ GL
Sbjct: 368 KICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGL 401



 Score = 40.0 bits (92), Expect(3) = 4e-29
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -2

Query: 592 AKLSDFRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           A    F  H  CK+L LTH++F DDLM+   G  +S++
Sbjct: 209 ASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSID 246



 Score = 28.9 bits (63), Expect(3) = 4e-29
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG  +SP LFV+ M+  S+++
Sbjct: 182 GLRQGCSLSPYLFVMSMDVLSKLL 205


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  109 bits (272), Expect(3) = 5e-29
 Identities = 53/151 (35%), Positives = 91/151 (60%)
 Frame = -1

Query: 470  VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
            +V+ +  F+  +GL  ++EKS++++AGV  S+ Q +++   +  G   ++YLGLPL  K+
Sbjct: 609  IVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKR 668

Query: 290  WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
                DC     ++ +KI A ++R LS+A R+ +I++ L+S+ NFW   F LP+  +  +D
Sbjct: 669  LTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICNFWMAAFRLPRACIREID 728

Query: 110  KKCREFLWGNTEDQRKISLVAWANVCCPKKQ 18
            K C  FLW  TE     + V+W  +C PKK+
Sbjct: 729  KLCSAFLWSGTELSSNKAKVSWEAICKPKKE 759



 Score = 39.3 bits (90), Expect(3) = 5e-29
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 577 FRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           F  HP C+ + LTH++F DDLMI   G  +S++
Sbjct: 575 FGYHPKCRAIGLTHLSFADDLMILSDGKVRSID 607



 Score = 26.2 bits (56), Expect(3) = 5e-29
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 660 LRQGGPVSPLLFVLVMEYFSRIM 592
           LRQG  +SP LFV+ M+  S+++
Sbjct: 544 LRQGCSLSPYLFVISMDVLSKML 566


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  103 bits (258), Expect(3) = 8e-29
 Identities = 52/154 (33%), Positives = 87/154 (56%)
 Frame = -1

Query: 470  VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
            V+   + F+  +GL  ++EKS+I++AGV+ S +   L    +  G   ++YLGLPL  K+
Sbjct: 1018 VINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQ 1077

Query: 290  WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
                D       +  KI + +AR LSYA R+ ++N+++ S+ NFW   + LP   +  ++
Sbjct: 1078 MTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIE 1137

Query: 110  KKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
            K C  FLW       K + +AW+++C PKK+ GL
Sbjct: 1138 KLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGL 1171



 Score = 43.1 bits (100), Expect(3) = 8e-29
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = -2

Query: 568  HPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
            HP C+K+ LTH+ F DDLM+F  G++ S+E
Sbjct: 987  HPKCEKIGLTHLCFADDLMVFVDGHQWSIE 1016



 Score = 26.9 bits (58), Expect(3) = 8e-29
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 663  GLRQGGPVSPLLFVLVMEYFSRIM 592
            GLRQG  +SP LFV+ M   S ++
Sbjct: 952  GLRQGCALSPYLFVICMNVLSHMI 975


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  104 bits (259), Expect(3) = 8e-29
 Identities = 53/154 (34%), Positives = 91/154 (59%)
 Frame = -1

Query: 470 VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
           +VE  + F+  +GL  ++EKS+++ AG++ +  Q ++    +  G+  ++YLGLPL  K+
Sbjct: 103 IVEVFETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQ 162

Query: 290 WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
            +  D       I +KI + SAR LSYA R+ +I+++L+S+ NFW   F LP+  +  +D
Sbjct: 163 LSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREID 222

Query: 110 KKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
           K C  +LW   +     + +AW +VC PK + GL
Sbjct: 223 KMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGL 256



 Score = 42.0 bits (97), Expect(3) = 8e-29
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = -2

Query: 577 FRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           F  HP CK++ LTH++F DDLM+   G  +S+E
Sbjct: 69  FGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIE 101



 Score = 27.7 bits (60), Expect(3) = 8e-29
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG  +SP LFV+ M   S+++
Sbjct: 37  GLRQGCSLSPYLFVVSMNVLSKLL 60


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 99.4 bits (246), Expect(3) = 1e-28
 Identities = 52/164 (31%), Positives = 92/164 (56%), Gaps = 4/164 (2%)
 Frame = -1

Query: 488  ISGKKKVVEAI----QYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIK 321
            I G+++ VE +    + F+  +GL  ++EKS++++A V++  +  +L    +  G   ++
Sbjct: 853  IDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVR 912

Query: 320  YLGLPLSHKKWNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFI 141
            YLG PL  K+    D      K+  KI + +AR LSYA R+ +IN+++ SL NFW   + 
Sbjct: 913  YLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYR 972

Query: 140  LPQCVLELVDKKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
            LP   ++ ++K C  FLW   E   K + + W ++C  K++ GL
Sbjct: 973  LPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGL 1016



 Score = 47.4 bits (111), Expect(3) = 1e-28
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -2

Query: 568 HPMCKKLKLTHMTFGDDLMIFCKGNEQSVE 479
           HP CKKL LTH+ F DDLM+F  G ++SVE
Sbjct: 832 HPKCKKLSLTHLCFADDLMVFIDGQQRSVE 861



 Score = 26.9 bits (58), Expect(3) = 1e-28
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG  +SP LFV+ M   S ++
Sbjct: 797 GLRQGCALSPYLFVICMNVLSHMI 820


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  104 bits (260), Expect(3) = 1e-28
 Identities = 54/154 (35%), Positives = 91/154 (59%)
 Frame = -1

Query: 470  VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
            + E +  F+  +GL  N +KS +F AG+ D  ++      G+  G+F I+YLGLPL  +K
Sbjct: 575  ICETLDDFADWSGLKVNKDKSQLFQAGL-DLSERITSAAYGFPAGTFPIRYLGLPLMCRK 633

Query: 290  WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
                D      K++ ++R+  ++ LS+A R Q+I++++F L NFW   F+LP+  ++ ++
Sbjct: 634  LRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIE 693

Query: 110  KKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
              C +FLW  + D RK S V+W + C PK + GL
Sbjct: 694  SLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGL 727



 Score = 37.7 bits (86), Expect(3) = 1e-28
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG P+SP LFVL ME FS+++
Sbjct: 509 GLRQGDPLSPYLFVLAMEVFSKLL 532



 Score = 31.2 bits (69), Expect(3) = 1e-28
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 568 HPMCKKLKLTHMTFGDDLMIFCKGNEQSV 482
           HP    L ++H+ F DD+MIF  G   S+
Sbjct: 544 HPKAGDLSISHLMFADDVMIFFDGGSSSM 572


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  104 bits (260), Expect(3) = 1e-28
 Identities = 54/154 (35%), Positives = 91/154 (59%)
 Frame = -1

Query: 470  VVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSHKK 291
            + E +  F+  +GL  N +KS +F AG+ D  ++      G+  G+F I+YLGLPL  +K
Sbjct: 575  ICETLDDFADWSGLKVNKDKSQLFQAGL-DLSERITSAAYGFPAGTFPIRYLGLPLMCRK 633

Query: 290  WNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLELVD 111
                D      K++ ++R+  ++ LS+A R Q+I++++F L NFW   F+LP+  ++ ++
Sbjct: 634  LRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIE 693

Query: 110  KKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
              C +FLW  + D RK S V+W + C PK + GL
Sbjct: 694  SLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGL 727



 Score = 37.7 bits (86), Expect(3) = 1e-28
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG P+SP LFVL ME FS+++
Sbjct: 509 GLRQGDPLSPYLFVLAMEVFSKLL 532



 Score = 31.2 bits (69), Expect(3) = 1e-28
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 568 HPMCKKLKLTHMTFGDDLMIFCKGNEQSV 482
           HP    L ++H+ F DD+MIF  G   S+
Sbjct: 544 HPKAGDLSISHLMFADDVMIFFDGGSSSM 572


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  102 bits (255), Expect(3) = 1e-28
 Identities = 48/156 (30%), Positives = 93/156 (59%)
 Frame = -1

Query: 476  KKVVEAIQYFSAITGLVANIEKSSIFIAGVTDSIKQYLLRITGYVEGSFLIKYLGLPLSH 297
            +++++    F+  +GL  ++EKS++++AG++ + +  +     +  G   ++YLGLPL  
Sbjct: 719  ERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLIT 778

Query: 296  KKWNKMDCHQFSIKITEKIRASSARHLSYASRIQVINTILFSLHNFWGLVFILPQCVLEL 117
            K+ +  DC     ++ ++I + ++R LSYA R+ +I+++L+S+ NFW   F LP+  +  
Sbjct: 779  KRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRE 838

Query: 116  VDKKCREFLWGNTEDQRKISLVAWANVCCPKKQTGL 9
            ++K C  FLW  TE     + ++W  VC PK + GL
Sbjct: 839  LEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGL 874



 Score = 41.6 bits (96), Expect(3) = 1e-28
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -2

Query: 577 FRIHPMCKKLKLTHMTFGDDLMIFCKGNEQSVEK 476
           F  HP CK + LTH++F DDLM+   G  +S+E+
Sbjct: 687 FGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIER 720



 Score = 28.9 bits (63), Expect(3) = 1e-28
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 663 GLRQGGPVSPLLFVLVMEYFSRIM 592
           GLRQG  +SP LFV+ M+  S+++
Sbjct: 655 GLRQGCALSPYLFVICMDVLSKML 678