BLASTX nr result
ID: Atropa21_contig00043104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00043104
(530 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 58 2e-11
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 59 8e-11
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 57 3e-10
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 57 5e-10
ref|XP_006607072.1| PREDICTED: putative ribonuclease H protein A... 57 4e-09
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 54 5e-09
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 55 9e-09
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 45 2e-08
ref|XP_006589935.1| PREDICTED: uncharacterized protein LOC102669... 55 3e-08
ref|XP_003553268.2| PREDICTED: putative ribonuclease H protein A... 52 4e-08
ref|XP_006598577.1| PREDICTED: putative ribonuclease H protein A... 50 1e-07
ref|XP_006605028.1| PREDICTED: putative ribonuclease H protein A... 53 2e-07
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 42 3e-07
ref|XP_006595358.1| PREDICTED: putative ribonuclease H protein A... 51 4e-07
ref|XP_006574147.1| PREDICTED: putative ribonuclease H protein A... 51 4e-07
ref|XP_006596802.1| PREDICTED: putative ribonuclease H protein A... 45 6e-07
ref|XP_006588248.1| PREDICTED: putative ribonuclease H protein A... 51 8e-07
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 48 1e-06
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 39 2e-06
ref|XP_006584230.1| PREDICTED: putative ribonuclease H protein A... 50 2e-06
>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 57.8 bits (138), Expect(2) = 2e-11
Identities = 29/79 (36%), Positives = 37/79 (46%)
Frame = +2
Query: 197 PPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFASIG 376
P + +DK+ RNFLWG V PK G +GIKK +D N A I
Sbjct: 74 PVSLCENLDKLNRNFLWGDTEIKKKVHLVNWDVVCQPKQLGDIGIKKTEDMNQAMLAKIS 133
Query: 377 GRLFSNLNSLWASTFIKRY 433
R+F LWAS F ++Y
Sbjct: 134 WRMFQCDKGLWASMFAEKY 152
Score = 36.2 bits (82), Expect(2) = 2e-11
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 88 RFSN*KIKFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
R S+ K K LS GR+TLI+ + + IP+YAMQ P S
Sbjct: 38 RLSSWKSKVLSMAGRLTLIQSVSSAIPNYAMQTAKFPVS 76
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +2
Query: 197 PPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFASIG 376
P ++ +DK+ RNFLWGS V PK+ G LG++ +KD N A +G
Sbjct: 609 PASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVG 668
Query: 377 GRLFSNLNSLWASTFIKRY 433
RL ++ SLWA ++Y
Sbjct: 669 WRLLNDKVSLWARVLRRKY 687
Score = 33.1 bits (74), Expect(2) = 8e-11
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +1
Query: 88 RFSN*KIKFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
R S K + LS GRITL K +L IP + M LLP S
Sbjct: 573 RLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPAS 611
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 57.0 bits (136), Expect(2) = 3e-10
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +2
Query: 182 NTFYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTS 361
+T P + +DK+ R+FLWGS V P+S+G LGI+KA+D N
Sbjct: 331 STIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKAL 390
Query: 362 FASIGGRLFSNLNSLWA 412
+ +G RL + +SLWA
Sbjct: 391 LSKVGWRLIQDYHSLWA 407
Score = 33.1 bits (74), Expect(2) = 3e-10
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 88 RFSN*KIKFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
R + K +FLS GR+TL K +L+ IP + M LP S
Sbjct: 300 RLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKS 338
>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 57.4 bits (137), Expect(2) = 5e-10
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = +2
Query: 182 NTFYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTS 361
+T P I++ +D++ R FLWGS V PK +G LG++ AK N
Sbjct: 54 STILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRAL 113
Query: 362 FASIGGRLFSNLNSLWASTFIKRY 433
+ +G RL NSLW K+Y
Sbjct: 114 ISKVGWRLLQEKNSLWTLVLQKKY 137
Score = 32.0 bits (71), Expect(2) = 5e-10
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 88 RFSN*KIKFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
R S + K LS GR+TL K +L+ +P ++M LLP S
Sbjct: 23 RMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQS 61
>ref|XP_006607072.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 217
Score = 57.0 bits (136), Expect(2) = 4e-09
Identities = 32/90 (35%), Positives = 38/90 (42%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P ++H I IQRNFLWG V LPK KG LGIK K N
Sbjct: 23 FRIPSKVVHKITSIQRNFLWGGGNEASKIPWVNWDTVCLPKHKGGLGIKDLKKFNEALLG 82
Query: 368 SIGGRLFSNLNSLWASTFIKRYANKHISYH 457
G L +N N WA + +Y + H
Sbjct: 83 KWGWELATNQNHFWARIVMSKYGGWNALIH 112
Score = 29.3 bits (64), Expect(2) = 4e-09
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 127 GRITLIKFILNVIPSYAMQYFLLP 198
GRITLI +L +P Y + +F +P
Sbjct: 3 GRITLINSVLTALPIYLLSFFRIP 26
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 53.9 bits (128), Expect(2) = 5e-09
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +2
Query: 197 PPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFASIG 376
P + +D+ R FLWGS + PK++G +G++ A+D N A +G
Sbjct: 674 PVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVG 733
Query: 377 GRLFSNLNSLWASTFIKRY 433
RL + SLWA K+Y
Sbjct: 734 WRLLQDKESLWARVVRKKY 752
Score = 32.0 bits (71), Expect(2) = 5e-09
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 88 RFSN*KIKFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
R + K + LS GRITL K +L+ IP + M LLP S
Sbjct: 638 RLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVS 676
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 54.7 bits (130), Expect(2) = 9e-09
Identities = 28/79 (35%), Positives = 35/79 (44%)
Frame = +2
Query: 197 PPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFASIG 376
P + IDK NFLWG V PK +G LG+KK D N A
Sbjct: 362 PLSLCESIDKANINFLWGDSNEKKKIHLVNWESVCKPKHRGGLGLKKTADMNQAMLAKAS 421
Query: 377 GRLFSNLNSLWASTFIKRY 433
R+F N + LWA + K+Y
Sbjct: 422 WRIFQNDHGLWADIYRKKY 440
Score = 30.4 bits (67), Expect(2) = 9e-09
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 109 KFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
K LS GR+TL++ + IP YAMQ LP S
Sbjct: 333 KTLSMAGRLTLVQSVTASIPIYAMQTAKLPLS 364
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 45.1 bits (105), Expect(3) = 2e-08
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = +2
Query: 197 PPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFASIG 376
P I ID+ RNFLW +T PKS G LGI+ A+D N+ +
Sbjct: 813 PQNICDSIDQTARNFLW-KGSNNKGIHLVNWKTITRPKSIGGLGIRSARDANICLLGKLV 871
Query: 377 GRLFSNLNSLWASTFIKRYAN 439
+ + N LW + K+Y++
Sbjct: 872 WDMVQSTNKLWVNLLAKKYSS 892
Score = 30.8 bits (68), Expect(3) = 2e-08
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 88 RFSN*KIKFLSPVGRITLIKFILNVIPSYAMQYFLLP 198
R ++ K + L+ GR+TL +L+ IP+Y MQ LP
Sbjct: 777 RLASWKNRLLNRTGRLTLATSVLSTIPTYYMQINWLP 813
Score = 27.3 bits (59), Expect(3) = 2e-08
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 6 GKYLVFSILNHKLKASDFQYIIDNIK 83
GKYL F +L + K SDF +I++ ++
Sbjct: 750 GKYLGFPMLQGRPKRSDFNFILEKMQ 775
>ref|XP_006589935.1| PREDICTED: uncharacterized protein LOC102669781 [Glycine max]
Length = 273
Score = 54.7 bits (130), Expect(2) = 3e-08
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 185 TFYS-PPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTS 361
+FY P ++H I IQRNFLWG V L K +G LGIK N
Sbjct: 151 SFYRIPKKVVHKIVSIQRNFLWGGDNETTKIPWVKWDTVCLSKIRGGLGIKDLNKFNQAL 210
Query: 362 FASIGGRLFSNLNSLWASTFIKRYANKH 445
G +L +N + LWA T + +Y H
Sbjct: 211 LGKWGWQLANNQHQLWARTLLSKYGGWH 238
Score = 28.5 bits (62), Expect(2) = 3e-08
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 115 LSPVGRITLIKFILNVIPSYAMQYFLLP 198
LS GRIT+I +L +P Y + ++ +P
Sbjct: 129 LSMGGRITIINSVLTALPIYLLSFYRIP 156
>ref|XP_003553268.2| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 744
Score = 52.4 bits (124), Expect(2) = 4e-08
Identities = 30/82 (36%), Positives = 35/82 (42%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P ++ IQRNFLWG V LPKSKG LGIK N
Sbjct: 334 FKIPKKVVQKAVSIQRNFLWGRGVEAARIAWVNWDTVCLPKSKGGLGIKDLTKFNEALLG 393
Query: 368 SIGGRLFSNLNSLWASTFIKRY 433
G L +N N LWA + +Y
Sbjct: 394 KWGWELANNHNQLWARVLLSKY 415
Score = 30.4 bits (67), Expect(2) = 4e-08
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 88 RFSN*KIKFLSPVGRITLIKFILNVIPSYAMQYFLLP 198
R + K + LS GRI+LI +L+ +P Y + +F +P
Sbjct: 301 RLAKWKQRCLSMGGRISLINSVLSAMPIYLLSFFKIP 337
>ref|XP_006598577.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 433
Score = 50.4 bits (119), Expect(2) = 1e-07
Identities = 29/82 (35%), Positives = 34/82 (41%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P ++H I IQRNFLWGS L K+KG LGIK N
Sbjct: 23 FMIPKKVVHKILSIQRNFLWGSHQEASKIPWVKWDTACLAKNKGGLGIKDLSKFNKALLG 82
Query: 368 SIGGRLFSNLNSLWASTFIKRY 433
G L +N N W I +Y
Sbjct: 83 KWGWELANNHNQPWTRILISKY 104
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 127 GRITLIKFILNVIPSYAMQYFLLP 198
GRITLI +L+ +P Y + +F++P
Sbjct: 3 GRITLINSVLSALPIYLLSFFMIP 26
>ref|XP_006605028.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 174
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 185 TFYS-PPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTS 361
+FY P ++ I IQRNF+WG V LPK +G LGIK N
Sbjct: 63 SFYRIPKKVVQKIVSIQRNFVWGGDNDISKIPWVKWDTVCLPKVRGGLGIKDLNKFNEAL 122
Query: 362 FASIGGRLFSNLNSLWASTFIKRYANKH 445
G +L +N + LWA T + +Y H
Sbjct: 123 LGKWGWQLANNPHQLWARTLVSKYGGWH 150
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 103 KIKFLSPVGRITLIKFILNVIPSYAMQYFLLP 198
K + S GRIT+I +L +P Y + ++ +P
Sbjct: 37 KHRCFSMGGRITIINSVLTALPIYLLSFYRIP 68
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 42.4 bits (98), Expect(3) = 3e-07
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +2
Query: 218 IDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFASIGGRLFSNL 397
ID+ R+FLWG ++ K +G LGI+ + N +G RL +
Sbjct: 824 IDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLGWRLLAEP 883
Query: 398 NSLWASTFIKRYANKHISYHKF 463
+SLW+ +Y + F
Sbjct: 884 SSLWSRILRAKYCDNRCDIDMF 905
Score = 29.6 bits (65), Expect(3) = 3e-07
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1
Query: 103 KIKFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
K K LS GR TLI+ + IP Y MQ LP S
Sbjct: 786 KTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRS 819
Score = 26.9 bits (58), Expect(3) = 3e-07
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 3 FGKYLVFSILNHKLKASDFQYIIDNI 80
FGKYL +N + ++QY++D I
Sbjct: 753 FGKYLGVPTINGRSSKREYQYLVDRI 778
>ref|XP_006595358.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 434
Score = 50.8 bits (120), Expect(2) = 4e-07
Identities = 27/82 (32%), Positives = 37/82 (45%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P ++H + IQRNFLWG + LPK++G LGIK N
Sbjct: 23 FRVPKKVVHKLVSIQRNFLWGGDSEVAKIAWVNWDTICLPKNRGGLGIKDLTKFNEALLG 82
Query: 368 SIGGRLFSNLNSLWASTFIKRY 433
G L +N + LWA + +Y
Sbjct: 83 KWGCDLANNQDQLWARILMSKY 104
Score = 28.9 bits (63), Expect(2) = 4e-07
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 127 GRITLIKFILNVIPSYAMQYFLLP 198
GRITLI +L +P Y + +F +P
Sbjct: 3 GRITLINSVLTALPIYMLSFFRVP 26
>ref|XP_006574147.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 179
Score = 50.8 bits (120), Expect(2) = 4e-07
Identities = 27/82 (32%), Positives = 37/82 (45%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P ++H + IQRNFLWG + LPK++G LGIK N
Sbjct: 23 FRVPKKVVHKLVSIQRNFLWGGDSEVAKIAWVNWDTICLPKNRGGLGIKDLAKFNEALLG 82
Query: 368 SIGGRLFSNLNSLWASTFIKRY 433
G L +N + LWA + +Y
Sbjct: 83 KWGCDLANNQDQLWARILMSKY 104
Score = 28.9 bits (63), Expect(2) = 4e-07
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 127 GRITLIKFILNVIPSYAMQYFLLP 198
GRIT+I +L +P Y M +F +P
Sbjct: 3 GRITVINSVLTALPIYMMSFFRVP 26
>ref|XP_006596802.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 245
Score = 44.7 bits (104), Expect(2) = 6e-07
Identities = 26/82 (31%), Positives = 33/82 (40%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P I + +QRNFLWG + LPK +G LG+K N
Sbjct: 129 FKLPRRIALKLVSLQRNFLWGGDQGHKKIHWVKWEVICLPKEEGGLGVKDISKFNTALMG 188
Query: 368 SIGGRLFSNLNSLWASTFIKRY 433
L SN N LWA + +Y
Sbjct: 189 RWVWALSSNRNQLWARILLSKY 210
Score = 34.3 bits (77), Expect(2) = 6e-07
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 109 KFLSPVGRITLIKFILNVIPSYAMQYFLLP 198
K LS VG++TLI +L +P Y + +F LP
Sbjct: 103 KILSLVGKVTLINSVLTALPIYTLSFFKLP 132
>ref|XP_006588248.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 434
Score = 50.8 bits (120), Expect(2) = 8e-07
Identities = 27/82 (32%), Positives = 37/82 (45%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P ++H + IQRNFLWG + LPK++G LGIK N
Sbjct: 23 FRVPKKVVHKLVSIQRNFLWGGDSEVAKIAWVNWDTICLPKNRGGLGIKDLAKFNEALLG 82
Query: 368 SIGGRLFSNLNSLWASTFIKRY 433
G L +N + LWA + +Y
Sbjct: 83 KWGCDLANNQDQLWARILMSKY 104
Score = 27.7 bits (60), Expect(2) = 8e-07
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 127 GRITLIKFILNVIPSYAMQYFLLP 198
GRIT+I +L +P Y + +F +P
Sbjct: 3 GRITVINSVLTALPIYMLSFFRVP 26
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 48.1 bits (113), Expect(2) = 1e-06
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = +2
Query: 182 NTFYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTS 361
+T P + +DK+ R FL GS V LPKS+G LGI+ +K N
Sbjct: 483 STISLPQSTLEGLDKLARVFLLGSSAEKKKLHLVAWDRVCLPKSEGGLGIRTSKCMNKAL 542
Query: 362 FASIGGRLFSNLNSLWASTFIKRY 433
+ +G RL ++ SLWA +Y
Sbjct: 543 VSKVGWRLINDRYSLWARILRSKY 566
Score = 30.0 bits (66), Expect(2) = 1e-06
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 88 RFSN*KIKFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
R + K + LS GR+TL K +L++IP + M LP S
Sbjct: 452 RLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQS 490
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 39.3 bits (90), Expect(2) = 2e-06
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P I+ I+K+ RNF WG + LPK +G LGI+ N A
Sbjct: 817 FVIPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLA 876
Query: 368 SIGGRLFSNLNSLWASTFIKRY------ANKHISYHKFFI*KNILMEGIICSNGIA*SLG 529
R+ + +SL A +Y +S + F K+IL + G+ +G
Sbjct: 877 KQAWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKSILSARAVIQKGMCRVIG 936
Score = 38.1 bits (87), Expect(2) = 2e-06
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +1
Query: 103 KIKFLSPVGRITLIKFILNVIPSYAMQYFLLPPS 204
K K+LS GR LIK + IP+YAMQ F++P S
Sbjct: 789 KGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKS 822
>ref|XP_006584230.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 211
Score = 49.7 bits (117), Expect(2) = 2e-06
Identities = 27/82 (32%), Positives = 37/82 (45%)
Frame = +2
Query: 188 FYSPPPIMHIIDKIQRNFLWGSXXXXXXXXXXXXXXVTLPKSKGRLGIKKAKDKNMTSFA 367
F P ++H + IQRNFLWG + LPK++G LGIK N
Sbjct: 23 FRVPKKVVHKLVFIQRNFLWGGDSEVAKIAWVNWDTICLPKNRGGLGIKDLAKFNEALLG 82
Query: 368 SIGGRLFSNLNSLWASTFIKRY 433
G L +N + LWA + +Y
Sbjct: 83 KWGCDLANNQDQLWARILMSKY 104
Score = 27.7 bits (60), Expect(2) = 2e-06
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 127 GRITLIKFILNVIPSYAMQYFLLP 198
GRIT+I +L +P Y + +F +P
Sbjct: 3 GRITVINSVLTALPIYMLSFFRVP 26