BLASTX nr result

ID: Atropa21_contig00043008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00043008
         (538 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232783.1| PREDICTED: uncharacterized protein LOC101249...    69   5e-16
ref|XP_004232786.1| PREDICTED: uncharacterized protein LOC101249...    46   3e-10
ref|XP_006347156.1| PREDICTED: uncharacterized protein LOC102601...    48   5e-10

>ref|XP_004232783.1| PREDICTED: uncharacterized protein LOC101249232 [Solanum
           lycopersicum]
          Length = 222

 Score = 68.6 bits (166), Expect(2) = 5e-16
 Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
 Frame = -3

Query: 515 VPLCALRANAVKLLEVEERDNQIHSEKIELEREAKAIIFDLYKGIFSLLVFSVGINSH-- 342
           VP   LR++ VKLL+VE+R N ++    +LER+A  ++  L +    L  ++ GI+ +  
Sbjct: 14  VPSRPLRSSVVKLLDVEQRRNALNQMNWDLERQALEVVSKLEQHTLFLFAWTGGISIYLT 73

Query: 341 -KVPSGPDFTIVFILFVCSFLSGMYFFMDSSKMRITTRNRSIRLLSARHQRVSLEARILM 165
             +PS   F  + IL +C FL+  +  +  +K RIT  N  I  L   ++ +  E R LM
Sbjct: 74  TSIPSAMAFA-MSILLMCLFLADSFIHIGMAKSRITKMNVLIMNLMRSYKYLREETRNLM 132

Query: 164 ELEHNRKRRLVANVL 120
           E + ++KRRL ANV+
Sbjct: 133 EFDRSKKRRL-ANVV 146



 Score = 41.2 bits (95), Expect(2) = 5e-16
 Identities = 22/32 (68%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
 Frame = -2

Query: 123 VVNNSEGPVITMDSFTTRTKTIY-DAPEFSDF 31
           VV+NSE PV+ MDSF  RTKTI  DA +FSDF
Sbjct: 145 VVDNSEVPVMDMDSFIARTKTICDDATDFSDF 176


>ref|XP_004232786.1| PREDICTED: uncharacterized protein LOC101249982 [Solanum
           lycopersicum]
          Length = 184

 Score = 45.8 bits (107), Expect(2) = 3e-10
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
 Frame = -3

Query: 431 ELEREAKAIIFDLYKGIFSLLVFSVGINSH---KVPSGPDFTIVFILFVCSFLSGMYFFM 261
           +LER+A  ++  L +    L  ++ GI+ +    +PS   F +  IL +C FL+  +  +
Sbjct: 4   DLERQALEVVSKLEQHTLFLFAWTGGISIYLTTSIPSAMAFAMS-ILLMCLFLADSFIHI 62

Query: 260 DSSKMRITTRNRSIRLLSARHQRVSLEARILMELEHNRKRRLVANVL 120
             +K RIT  N  I  L   ++ +  E R LME + ++K RL ANV+
Sbjct: 63  GMAKSRITKMNVLIMNLMRSYKYLREETRNLMEFDRSKKGRL-ANVV 108



 Score = 44.7 bits (104), Expect(2) = 3e-10
 Identities = 23/32 (71%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = -2

Query: 123 VVNNSEGPVITMDSFTTRTKTIY-DAPEFSDF 31
           VV+NSEGPV+ MDSF  RTKTI  DA +FSDF
Sbjct: 107 VVDNSEGPVMDMDSFIARTKTICDDATDFSDF 138


>ref|XP_006347156.1| PREDICTED: uncharacterized protein LOC102601028 [Solanum tuberosum]
          Length = 140

 Score = 48.1 bits (113), Expect(2) = 5e-10
 Identities = 24/32 (75%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = -2

Query: 123 VVNNSEGPVITMDSFTTRTKTIY-DAPEFSDF 31
           VV+NSEGPV+ MDSF  RTKTIY DA +FSDF
Sbjct: 57  VVDNSEGPVMDMDSFIARTKTIYDDATDFSDF 88



 Score = 41.6 bits (96), Expect(2) = 5e-10
 Identities = 25/59 (42%), Positives = 36/59 (61%)
 Frame = -3

Query: 296 VCSFLSGMYFFMDSSKMRITTRNRSIRLLSARHQRVSLEARILMELEHNRKRRLVANVL 120
           +CSFL+  +  +  +K RITT N  I  L  R++ +  E R LME E ++K RL ANV+
Sbjct: 1   MCSFLADSFIRIGMAKSRITTMNMLIMDLMQRYKDLREETRNLMEFERSKKGRL-ANVV 58


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