BLASTX nr result
ID: Atropa21_contig00043002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00043002
(663 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006607078.1| PREDICTED: uncharacterized protein LOC102667... 65 2e-08
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal... 62 2e-07
gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arab... 62 2e-07
ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis t... 62 2e-07
ref|XP_002331746.1| predicted protein [Populus trichocarpa] 62 2e-07
ref|XP_004253223.1| PREDICTED: uncharacterized protein LOC101267... 61 3e-07
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 61 3e-07
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 61 3e-07
ref|XP_002332341.1| predicted protein [Populus trichocarpa] 60 4e-07
ref|XP_002331734.1| predicted protein [Populus trichocarpa] 60 6e-07
ref|XP_002335943.1| predicted protein [Populus trichocarpa] 60 6e-07
ref|XP_002331338.1| predicted protein [Populus trichocarpa] 60 8e-07
ref|XP_002319850.1| predicted protein [Populus trichocarpa] 60 8e-07
ref|XP_002333406.1| predicted protein [Populus trichocarpa] 60 8e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa] 59 1e-06
ref|XP_002338216.1| predicted protein [Populus trichocarpa] 59 1e-06
ref|XP_002332212.1| predicted protein [Populus trichocarpa] 59 2e-06
ref|XP_002337404.1| predicted protein [Populus trichocarpa] 59 2e-06
ref|XP_002333199.1| predicted protein [Populus trichocarpa] 59 2e-06
ref|XP_002332412.1| predicted protein [Populus trichocarpa] 58 2e-06
>ref|XP_006607078.1| PREDICTED: uncharacterized protein LOC102667760 [Glycine max]
Length = 331
Score = 64.7 bits (156), Expect = 2e-08
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Frame = -2
Query: 359 KDTGNREDRVGRNN-----VLGDFNTVLHTEVRVGGNNV--------KNCIDYCGFTELP 219
K+ N+ + +GRN V+GDFN VL ++ R+GGNNV K + G E
Sbjct: 116 KELWNKIEDIGRNLNGPWIVIGDFNNVLDSQDRIGGNNVVETKVRDLKTMMSNMGLFEAD 175
Query: 218 KNGCTCT*NDKHDNNRVF*KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSV 39
G T ++KH + ++ +ID V+ N +W + + + L SDHSP + L
Sbjct: 176 MKGNHYTWSNKHVVDVIYSRIDRVIGNVDWFQKYQDASYEVLDPNISDHSPIKIGLQIQK 235
Query: 38 PRTKKAFKYYN 6
PR F++ N
Sbjct: 236 PRRVYLFRFIN 246
>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
Length = 668
Score = 62.0 bits (149), Expect = 2e-07
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = -2
Query: 308 DFNTVLHTEVRVGG-NNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID*VLINGE 132
D +VL T + + G +NC+ ++P G T ++ D+N + K+D + NG+
Sbjct: 171 DHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGD 230
Query: 131 WMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
W + ++ F G SDHSP + L N R+KK F+Y++
Sbjct: 231 WFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFS 272
>gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arabidopsis thaliana]
Length = 602
Score = 62.0 bits (149), Expect = 2e-07
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = -2
Query: 308 DFNTVLHTEVRVGG-NNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID*VLINGE 132
D +VL T + + G +NC+ ++P G T ++ D+N + K+D + NG+
Sbjct: 171 DHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGD 230
Query: 131 WMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
W + ++ F G SDHSP + L N R+KK F+Y++
Sbjct: 231 WFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFS 272
>ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis thaliana]
gi|332193872|gb|AEE31993.1| DNAse I-like superfamily
protein [Arabidopsis thaliana]
Length = 626
Score = 62.0 bits (149), Expect = 2e-07
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = -2
Query: 308 DFNTVLHTEVRVGG-NNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID*VLINGE 132
D +VL T + + G +NC+ ++P G T ++ D+N + K+D + NG+
Sbjct: 235 DHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGD 294
Query: 131 WMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
W + ++ F G SDHSP + L N R+KK F+Y++
Sbjct: 295 WFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFS 336
>ref|XP_002331746.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T +++ N +
Sbjct: 122 LMGDFNAIRNQSHRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 181
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+V+FLP G SDHSP V ++ + KK F+++++
Sbjct: 182 KLDRVLVNEKWNLNFPLSEVRFLPSGISDHSPMVVKVIGNDQNIKKPFRFFDM 234
>ref|XP_004253223.1| PREDICTED: uncharacterized protein LOC101267216 [Solanum
lycopersicum]
Length = 261
Score = 61.2 bits (147), Expect = 3e-07
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGG-----NNVK---NCIDYCGFTELPKNGCTCT*NDKHDNN-RVF 165
+ GDFN ++ + R+ G N +K NC+ G EL G T N+KH N R+
Sbjct: 11 IAGDFNAIMSPKDRLAGAPVNENEIKDFSNCVKVMGINELQWKGNYYTWNNKHSGNARIS 70
Query: 164 *KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
+ID V N WMD +++ G SDHSP + L + + FK++NV
Sbjct: 71 SRIDRVFGNDAWMDKWGHVILEYGNPGVSDHSPMQLMLHQGYQQVRVNFKFFNV 124
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 61.2 bits (147), Expect = 3e-07
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Frame = -2
Query: 317 VLGDFNTVL----HTEVRV------GGNNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRV 168
+LGDFN + H + G +++ C+ ++LP G T ++ +N +
Sbjct: 182 LLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPI 241
Query: 167 F*KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
K+D L NGEW ++ F P G SDH+P + + N P +KK+FKY++
Sbjct: 242 LRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFS 295
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 61.2 bits (147), Expect = 3e-07
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Frame = -2
Query: 317 VLGDFNTVL----HTEVRV------GGNNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRV 168
+LGDFN + H + G +++ C+ ++LP G T ++ +N +
Sbjct: 139 LLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPI 198
Query: 167 F*KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
K+D L NGEW ++ F P G SDH+P + + N P +KK+FKY++
Sbjct: 199 LRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFS 252
>ref|XP_002332341.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 60.5 bits (145), Expect = 4e-07
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T +++ N +
Sbjct: 229 LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKIDDLRYSGMHYTWSNQCPENLIIR 288
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+ +FLP G SDHSP V ++ + KK F+++++
Sbjct: 289 KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 341
>ref|XP_002331734.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 60.1 bits (144), Expect = 6e-07
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T +++ N +
Sbjct: 419 LMGDFNAIRNQSDRLGGSTTWADTMDRLDTCIREAQVDDLRYSGMHYTWSNQCPENLIMR 478
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+ +FLP G SDHSP V ++ + KK F+++++
Sbjct: 479 KLDRVLVNEKWNLNFPLSETRFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 531
>ref|XP_002335943.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 60.1 bits (144), Expect = 6e-07
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T +++ N +
Sbjct: 196 LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 255
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+ +FLP G SDHSP V ++ + KK F+++++
Sbjct: 256 KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 308
>ref|XP_002331338.1| predicted protein [Populus trichocarpa]
Length = 819
Score = 59.7 bits (143), Expect = 8e-07
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T +++ N +
Sbjct: 515 LIGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 574
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+ +FLP G SDHSP V ++ + KK F+++++
Sbjct: 575 KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDM 627
>ref|XP_002319850.1| predicted protein [Populus trichocarpa]
Length = 809
Score = 59.7 bits (143), Expect = 8e-07
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T +++ N +
Sbjct: 662 LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 721
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+ +FLP G SDHSP V ++ + KK F+++++
Sbjct: 722 KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 774
>ref|XP_002333406.1| predicted protein [Populus trichocarpa]
Length = 1166
Score = 59.7 bits (143), Expect = 8e-07
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T +++ N +
Sbjct: 662 LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMQ 721
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+ +FLP G SDHSP V ++ + KK F+++++
Sbjct: 722 KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 774
>ref|XP_002329612.1| predicted protein [Populus trichocarpa]
Length = 1046
Score = 59.3 bits (142), Expect = 1e-06
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T +++ N +
Sbjct: 592 LMGDFNAIRNQSGRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 651
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
+D VL+N +W SK +FLP G SDHSP V ++ + KK F+++++
Sbjct: 652 TLDRVLVNEKWNLNFPLSKARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 704
>ref|XP_002338216.1| predicted protein [Populus trichocarpa]
Length = 349
Score = 58.9 bits (141), Expect = 1e-06
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = -2
Query: 311 GDFNTVLHTEVRVGGNNV-------KNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID 153
GDFN L R GG+ + KNCID C ELP NG T V +ID
Sbjct: 199 GDFNETLSPSDRKGGSRISSAMISFKNCIDCCELVELPLNGKKFT----WSRGNVASRID 254
Query: 152 *VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
+ ++G+W+ ++ +S + L + SDH P H+ L++S K F+ N
Sbjct: 255 RLFVSGDWLQSLPSSTLYGLSKNFSDHRPLHM-LIDSTNWGPKPFRLMN 302
>ref|XP_002332212.1| predicted protein [Populus trichocarpa]
Length = 603
Score = 58.5 bits (140), Expect = 2e-06
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + R+GG+ + CI +L +G T ++ N +
Sbjct: 455 LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWLNQCPENLIMR 514
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+ +FLP G SDHSP V ++ + KK F+++++
Sbjct: 515 KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 567
>ref|XP_002337404.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 58.5 bits (140), Expect = 2e-06
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Frame = -2
Query: 311 GDFNTVLHTEVRVGGNNV-------KNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID 153
GDFN L R G + + KNCID C ELP NG T + + +R ID
Sbjct: 150 GDFNETLFPSDRKGSSQITSSMTRFKNCIDGCNLMELPLNGRKFTWSRGNAASR----ID 205
Query: 152 *VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
+ ++G+W+ T +S + L + +SDH P H+ L++S K F++ N
Sbjct: 206 RIFVSGDWLQTFPSSTLFGLSKYSSDHRPLHL-LLDSTNWGPKPFRFMN 253
>ref|XP_002333199.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 58.5 bits (140), Expect = 2e-06
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Frame = -2
Query: 311 GDFNTVLHTEVRVGGNNV-------KNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID 153
GDFN L R GG+ + KNCID C ELP NG T + + +R ID
Sbjct: 236 GDFNETLFPSDRKGGSQITSSMTRFKNCIDGCNLMELPLNGRKFTWSRGNAASR----ID 291
Query: 152 *VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
+ ++G+W+ T +S + L + + DH P H+ L++S K F++ N
Sbjct: 292 RIFVSGDWLQTFPSSTLFGLSKYSYDHRPLHL-LLDSTNWGPKPFRFMN 339
>ref|XP_002332412.1| predicted protein [Populus trichocarpa]
Length = 349
Score = 58.2 bits (139), Expect = 2e-06
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Frame = -2
Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
++GDFN + + ++GG+ + CI +L +G T +++ N +
Sbjct: 138 LMGDFNAIRNQSDKLGGSTTWAGTMHRLDTCIREAKVDDLWYSGMHYTWSNQCPENLIMR 197
Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
K+D VL+N +W S+ +FLP G SDHSP V ++ + KK F+++++
Sbjct: 198 KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 250