BLASTX nr result

ID: Atropa21_contig00043002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00043002
         (663 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006607078.1| PREDICTED: uncharacterized protein LOC102667...    65   2e-08
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal...    62   2e-07
gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arab...    62   2e-07
ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis t...    62   2e-07
ref|XP_002331746.1| predicted protein [Populus trichocarpa]            62   2e-07
ref|XP_004253223.1| PREDICTED: uncharacterized protein LOC101267...    61   3e-07
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               61   3e-07
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    61   3e-07
ref|XP_002332341.1| predicted protein [Populus trichocarpa]            60   4e-07
ref|XP_002331734.1| predicted protein [Populus trichocarpa]            60   6e-07
ref|XP_002335943.1| predicted protein [Populus trichocarpa]            60   6e-07
ref|XP_002331338.1| predicted protein [Populus trichocarpa]            60   8e-07
ref|XP_002319850.1| predicted protein [Populus trichocarpa]            60   8e-07
ref|XP_002333406.1| predicted protein [Populus trichocarpa]            60   8e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa]            59   1e-06
ref|XP_002338216.1| predicted protein [Populus trichocarpa]            59   1e-06
ref|XP_002332212.1| predicted protein [Populus trichocarpa]            59   2e-06
ref|XP_002337404.1| predicted protein [Populus trichocarpa]            59   2e-06
ref|XP_002333199.1| predicted protein [Populus trichocarpa]            59   2e-06
ref|XP_002332412.1| predicted protein [Populus trichocarpa]            58   2e-06

>ref|XP_006607078.1| PREDICTED: uncharacterized protein LOC102667760 [Glycine max]
          Length = 331

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
 Frame = -2

Query: 359 KDTGNREDRVGRNN-----VLGDFNTVLHTEVRVGGNNV--------KNCIDYCGFTELP 219
           K+  N+ + +GRN      V+GDFN VL ++ R+GGNNV        K  +   G  E  
Sbjct: 116 KELWNKIEDIGRNLNGPWIVIGDFNNVLDSQDRIGGNNVVETKVRDLKTMMSNMGLFEAD 175

Query: 218 KNGCTCT*NDKHDNNRVF*KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSV 39
             G   T ++KH  + ++ +ID V+ N +W    + +  + L    SDHSP  + L    
Sbjct: 176 MKGNHYTWSNKHVVDVIYSRIDRVIGNVDWFQKYQDASYEVLDPNISDHSPIKIGLQIQK 235

Query: 38  PRTKKAFKYYN 6
           PR    F++ N
Sbjct: 236 PRRVYLFRFIN 246


>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 668

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = -2

Query: 308 DFNTVLHTEVRVGG-NNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID*VLINGE 132
           D  +VL T + + G    +NC+      ++P  G   T ++  D+N +  K+D  + NG+
Sbjct: 171 DHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGD 230

Query: 131 WMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
           W  +  ++   F   G SDHSP  + L N   R+KK F+Y++
Sbjct: 231 WFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFS 272


>gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arabidopsis thaliana]
          Length = 602

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = -2

Query: 308 DFNTVLHTEVRVGG-NNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID*VLINGE 132
           D  +VL T + + G    +NC+      ++P  G   T ++  D+N +  K+D  + NG+
Sbjct: 171 DHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGD 230

Query: 131 WMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
           W  +  ++   F   G SDHSP  + L N   R+KK F+Y++
Sbjct: 231 WFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFS 272


>ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis thaliana]
           gi|332193872|gb|AEE31993.1| DNAse I-like superfamily
           protein [Arabidopsis thaliana]
          Length = 626

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = -2

Query: 308 DFNTVLHTEVRVGG-NNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID*VLINGE 132
           D  +VL T + + G    +NC+      ++P  G   T ++  D+N +  K+D  + NG+
Sbjct: 235 DHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGD 294

Query: 131 WMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
           W  +  ++   F   G SDHSP  + L N   R+KK F+Y++
Sbjct: 295 WFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFS 336


>ref|XP_002331746.1| predicted protein [Populus trichocarpa]
          Length = 503

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
           ++GDFN + +   R+GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 122 LMGDFNAIRNQSHRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 181

Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
           K+D VL+N +W      S+V+FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 182 KLDRVLVNEKWNLNFPLSEVRFLPSGISDHSPMVVKVIGNDQNIKKPFRFFDM 234


>ref|XP_004253223.1| PREDICTED: uncharacterized protein LOC101267216 [Solanum
           lycopersicum]
          Length = 261

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGG-----NNVK---NCIDYCGFTELPKNGCTCT*NDKHDNN-RVF 165
           + GDFN ++  + R+ G     N +K   NC+   G  EL   G   T N+KH  N R+ 
Sbjct: 11  IAGDFNAIMSPKDRLAGAPVNENEIKDFSNCVKVMGINELQWKGNYYTWNNKHSGNARIS 70

Query: 164 *KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
            +ID V  N  WMD      +++   G SDHSP  + L     + +  FK++NV
Sbjct: 71  SRIDRVFGNDAWMDKWGHVILEYGNPGVSDHSPMQLMLHQGYQQVRVNFKFFNV 124


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
 Frame = -2

Query: 317 VLGDFNTVL----HTEVRV------GGNNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRV 168
           +LGDFN +     H  +        G  +++ C+     ++LP  G   T ++   +N +
Sbjct: 182 LLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPI 241

Query: 167 F*KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
             K+D  L NGEW     ++   F P G SDH+P  + + N  P +KK+FKY++
Sbjct: 242 LRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFS 295


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
 Frame = -2

Query: 317 VLGDFNTVL----HTEVRV------GGNNVKNCIDYCGFTELPKNGCTCT*NDKHDNNRV 168
           +LGDFN +     H  +        G  +++ C+     ++LP  G   T ++   +N +
Sbjct: 139 LLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPI 198

Query: 167 F*KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
             K+D  L NGEW     ++   F P G SDH+P  + + N  P +KK+FKY++
Sbjct: 199 LRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFS 252


>ref|XP_002332341.1| predicted protein [Populus trichocarpa]
          Length = 421

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
           ++GDFN + +   R+GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 229 LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKIDDLRYSGMHYTWSNQCPENLIIR 288

Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
           K+D VL+N +W      S+ +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 289 KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 341


>ref|XP_002331734.1| predicted protein [Populus trichocarpa]
          Length = 557

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
           ++GDFN + +   R+GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 419 LMGDFNAIRNQSDRLGGSTTWADTMDRLDTCIREAQVDDLRYSGMHYTWSNQCPENLIMR 478

Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
           K+D VL+N +W      S+ +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 479 KLDRVLVNEKWNLNFPLSETRFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 531


>ref|XP_002335943.1| predicted protein [Populus trichocarpa]
          Length = 321

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
           ++GDFN + +   R+GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 196 LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 255

Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
           K+D VL+N +W      S+ +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 256 KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 308


>ref|XP_002331338.1| predicted protein [Populus trichocarpa]
          Length = 819

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
           ++GDFN + +   R+GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 515 LIGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 574

Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
           K+D VL+N +W      S+ +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 575 KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDM 627


>ref|XP_002319850.1| predicted protein [Populus trichocarpa]
          Length = 809

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317  VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
            ++GDFN + +   R+GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 662  LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 721

Query: 161  KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
            K+D VL+N +W      S+ +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 722  KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 774


>ref|XP_002333406.1| predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317  VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
            ++GDFN + +   R+GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 662  LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMQ 721

Query: 161  KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
            K+D VL+N +W      S+ +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 722  KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 774


>ref|XP_002329612.1| predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
           ++GDFN + +   R+GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 592 LMGDFNAIRNQSGRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLIMR 651

Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
            +D VL+N +W      SK +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 652 TLDRVLVNEKWNLNFPLSKARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 704


>ref|XP_002338216.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
 Frame = -2

Query: 311 GDFNTVLHTEVRVGGNNV-------KNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID 153
           GDFN  L    R GG+ +       KNCID C   ELP NG   T         V  +ID
Sbjct: 199 GDFNETLSPSDRKGGSRISSAMISFKNCIDCCELVELPLNGKKFT----WSRGNVASRID 254

Query: 152 *VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
            + ++G+W+ ++ +S +  L +  SDH P H+ L++S     K F+  N
Sbjct: 255 RLFVSGDWLQSLPSSTLYGLSKNFSDHRPLHM-LIDSTNWGPKPFRLMN 302


>ref|XP_002332212.1| predicted protein [Populus trichocarpa]
          Length = 603

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
           ++GDFN + +   R+GG+         +  CI      +L  +G   T  ++   N +  
Sbjct: 455 LMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWLNQCPENLIMR 514

Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
           K+D VL+N +W      S+ +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 515 KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 567


>ref|XP_002337404.1| predicted protein [Populus trichocarpa]
          Length = 337

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
 Frame = -2

Query: 311 GDFNTVLHTEVRVGGNNV-------KNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID 153
           GDFN  L    R G + +       KNCID C   ELP NG   T +  +  +R    ID
Sbjct: 150 GDFNETLFPSDRKGSSQITSSMTRFKNCIDGCNLMELPLNGRKFTWSRGNAASR----ID 205

Query: 152 *VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
            + ++G+W+ T  +S +  L + +SDH P H+ L++S     K F++ N
Sbjct: 206 RIFVSGDWLQTFPSSTLFGLSKYSSDHRPLHL-LLDSTNWGPKPFRFMN 253


>ref|XP_002333199.1| predicted protein [Populus trichocarpa]
          Length = 439

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
 Frame = -2

Query: 311 GDFNTVLHTEVRVGGNNV-------KNCIDYCGFTELPKNGCTCT*NDKHDNNRVF*KID 153
           GDFN  L    R GG+ +       KNCID C   ELP NG   T +  +  +R    ID
Sbjct: 236 GDFNETLFPSDRKGGSQITSSMTRFKNCIDGCNLMELPLNGRKFTWSRGNAASR----ID 291

Query: 152 *VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYN 6
            + ++G+W+ T  +S +  L + + DH P H+ L++S     K F++ N
Sbjct: 292 RIFVSGDWLQTFPSSTLFGLSKYSYDHRPLHL-LLDSTNWGPKPFRFMN 339


>ref|XP_002332412.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
 Frame = -2

Query: 317 VLGDFNTVLHTEVRVGGNN--------VKNCIDYCGFTELPKNGCTCT*NDKHDNNRVF* 162
           ++GDFN + +   ++GG+         +  CI      +L  +G   T +++   N +  
Sbjct: 138 LMGDFNAIRNQSDKLGGSTTWAGTMHRLDTCIREAKVDDLWYSGMHYTWSNQCPENLIMR 197

Query: 161 KID*VLINGEWMDTMEASKVQFLPEGTSDHSPAHVTLMNSVPRTKKAFKYYNV 3
           K+D VL+N +W      S+ +FLP G SDHSP  V ++ +    KK F+++++
Sbjct: 198 KLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDM 250


Top