BLASTX nr result

ID: Atropa21_contig00042671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00042671
         (492 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233592.1| PREDICTED: sister chromatid cohesion 1 prote...   136   2e-34
ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 prote...   116   2e-28
emb|CDJ07317.1| trans sialidase [Hymenolepis microstoma]               63   5e-08
ref|XP_004918986.1| PREDICTED: uncharacterized protein ORF50-lik...    55   7e-06

>ref|XP_004233592.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum
           lycopersicum]
          Length = 617

 Score =  136 bits (342), Expect(2) = 2e-34
 Identities = 74/125 (59%), Positives = 82/125 (65%)
 Frame = -2

Query: 425 LSIDIISAICKIKSTRDGPAETGAVPLHVDIPESPNKLRSGKQIPIAPATSLHEDIPIAP 246
           LSIDI SAI KI+S + GPAET  +PL  D+P+SP KLRSG+QIPI              
Sbjct: 369 LSIDIASAISKIRSAQHGPAETVEIPLREDMPDSPYKLRSGEQIPI-------------- 414

Query: 245 ATSLHEDIPIAPATSLHEDTPESPGTLRCGEHIPIPPVASLHVGVPEYPNTQRHDGEQTP 66
                     A ATS+HE  PESPGTLRCGE IP  P ASLHVGVPE PNT R+DGEQTP
Sbjct: 415 ----------ASATSMHEYLPESPGTLRCGEQIPDAPAASLHVGVPESPNTLRYDGEQTP 464

Query: 65  IAPAT 51
           IAP T
Sbjct: 465 IAPTT 469



 Score = 35.4 bits (80), Expect(2) = 2e-34
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = -3

Query: 61  PLQPVTGSSSLRFHDMGGTS 2
           P  PVTGSSSLRFHD  GTS
Sbjct: 467 PTTPVTGSSSLRFHDTQGTS 486


>ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum
           tuberosum]
          Length = 627

 Score =  116 bits (290), Expect(2) = 2e-28
 Identities = 70/126 (55%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
 Frame = -2

Query: 425 LSIDIISAICKIKSTRDGPAETGAVPLHVDIPESPNKLRSGKQIPIAPATSLHEDIPIAP 246
           LSIDIISAI KI+S R GPAET  VPL  D+P+SP KLRSG++IPIAPATSLHE +P +P
Sbjct: 455 LSIDIISAISKIRSARHGPAETVEVPLCEDMPDSPYKLRSGEEIPIAPATSLHEYLPESP 514

Query: 245 AT-SLHEDIPIAPATSLHEDTPESPGTLRCGEHIPIPPVASLHVGVPEYPNTQRHDGEQT 69
            T    E IP APA SLH   PES                          NT R+DGEQT
Sbjct: 515 GTLRCGEQIPNAPAASLHVGVPES-------------------------HNTLRYDGEQT 549

Query: 68  PIAPAT 51
           PIAPAT
Sbjct: 550 PIAPAT 555



 Score = 35.4 bits (80), Expect(2) = 2e-28
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = -3

Query: 61  PLQPVTGSSSLRFHDMGGTS 2
           P  PVTGSSSLRFHD  GTS
Sbjct: 553 PATPVTGSSSLRFHDTQGTS 572


>emb|CDJ07317.1| trans sialidase [Hymenolepis microstoma]
          Length = 248

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/100 (37%), Positives = 57/100 (57%)
 Frame = -2

Query: 350 PLHVDIPESPNKLRSGKQIPIAPATSLHEDIPIAPATSLHEDIPIAPATSLHEDTPESPG 171
           P  + +P S N     +++PI PAT+  E++P+ PAT+  E++P+ PAT+  E+ P  P 
Sbjct: 30  PDELPVPPSTN---GPEELPIPPATNGPEELPVPPATNGPEELPVPPATNGPEELPVPPA 86

Query: 170 TLRCGEHIPIPPVASLHVGVPEYPNTQRHDGEQTPIAPAT 51
           T    E +P+PP       +P  P T+R   E+ PI PAT
Sbjct: 87  T-NGPEELPVPPATKGPEELPVPPATKR--PEELPIPPAT 123


>ref|XP_004918986.1| PREDICTED: uncharacterized protein ORF50-like [Xenopus (Silurana)
           tropicalis]
          Length = 462

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/94 (35%), Positives = 47/94 (50%)
 Frame = -2

Query: 335 IPESPNKLRSGKQIPIAPATSLHEDIPIAPATSLHEDIPIAPATSLHEDTPESPGTLRCG 156
           IP +P   ++G  IP+APA      IP+APA      IP+AP+       P +P + + G
Sbjct: 112 IPVAP-VAQTGTGIPLAPAAQTGTGIPLAPAAQTGTGIPVAPSAQTETGIPVAP-SAQTG 169

Query: 155 EHIPIPPVASLHVGVPEYPNTQRHDGEQTPIAPA 54
             IP+ P A    G+P  P  Q   G   P+AP+
Sbjct: 170 TGIPVAPSAQTETGIPVAPAAQ--TGTGIPVAPS 201


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