BLASTX nr result
ID: Atropa21_contig00042671
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00042671 (492 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004233592.1| PREDICTED: sister chromatid cohesion 1 prote... 136 2e-34 ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 prote... 116 2e-28 emb|CDJ07317.1| trans sialidase [Hymenolepis microstoma] 63 5e-08 ref|XP_004918986.1| PREDICTED: uncharacterized protein ORF50-lik... 55 7e-06 >ref|XP_004233592.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum lycopersicum] Length = 617 Score = 136 bits (342), Expect(2) = 2e-34 Identities = 74/125 (59%), Positives = 82/125 (65%) Frame = -2 Query: 425 LSIDIISAICKIKSTRDGPAETGAVPLHVDIPESPNKLRSGKQIPIAPATSLHEDIPIAP 246 LSIDI SAI KI+S + GPAET +PL D+P+SP KLRSG+QIPI Sbjct: 369 LSIDIASAISKIRSAQHGPAETVEIPLREDMPDSPYKLRSGEQIPI-------------- 414 Query: 245 ATSLHEDIPIAPATSLHEDTPESPGTLRCGEHIPIPPVASLHVGVPEYPNTQRHDGEQTP 66 A ATS+HE PESPGTLRCGE IP P ASLHVGVPE PNT R+DGEQTP Sbjct: 415 ----------ASATSMHEYLPESPGTLRCGEQIPDAPAASLHVGVPESPNTLRYDGEQTP 464 Query: 65 IAPAT 51 IAP T Sbjct: 465 IAPTT 469 Score = 35.4 bits (80), Expect(2) = 2e-34 Identities = 16/20 (80%), Positives = 16/20 (80%) Frame = -3 Query: 61 PLQPVTGSSSLRFHDMGGTS 2 P PVTGSSSLRFHD GTS Sbjct: 467 PTTPVTGSSSLRFHDTQGTS 486 >ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum tuberosum] Length = 627 Score = 116 bits (290), Expect(2) = 2e-28 Identities = 70/126 (55%), Positives = 78/126 (61%), Gaps = 1/126 (0%) Frame = -2 Query: 425 LSIDIISAICKIKSTRDGPAETGAVPLHVDIPESPNKLRSGKQIPIAPATSLHEDIPIAP 246 LSIDIISAI KI+S R GPAET VPL D+P+SP KLRSG++IPIAPATSLHE +P +P Sbjct: 455 LSIDIISAISKIRSARHGPAETVEVPLCEDMPDSPYKLRSGEEIPIAPATSLHEYLPESP 514 Query: 245 AT-SLHEDIPIAPATSLHEDTPESPGTLRCGEHIPIPPVASLHVGVPEYPNTQRHDGEQT 69 T E IP APA SLH PES NT R+DGEQT Sbjct: 515 GTLRCGEQIPNAPAASLHVGVPES-------------------------HNTLRYDGEQT 549 Query: 68 PIAPAT 51 PIAPAT Sbjct: 550 PIAPAT 555 Score = 35.4 bits (80), Expect(2) = 2e-28 Identities = 16/20 (80%), Positives = 16/20 (80%) Frame = -3 Query: 61 PLQPVTGSSSLRFHDMGGTS 2 P PVTGSSSLRFHD GTS Sbjct: 553 PATPVTGSSSLRFHDTQGTS 572 >emb|CDJ07317.1| trans sialidase [Hymenolepis microstoma] Length = 248 Score = 62.8 bits (151), Expect = 5e-08 Identities = 37/100 (37%), Positives = 57/100 (57%) Frame = -2 Query: 350 PLHVDIPESPNKLRSGKQIPIAPATSLHEDIPIAPATSLHEDIPIAPATSLHEDTPESPG 171 P + +P S N +++PI PAT+ E++P+ PAT+ E++P+ PAT+ E+ P P Sbjct: 30 PDELPVPPSTN---GPEELPIPPATNGPEELPVPPATNGPEELPVPPATNGPEELPVPPA 86 Query: 170 TLRCGEHIPIPPVASLHVGVPEYPNTQRHDGEQTPIAPAT 51 T E +P+PP +P P T+R E+ PI PAT Sbjct: 87 T-NGPEELPVPPATKGPEELPVPPATKR--PEELPIPPAT 123 >ref|XP_004918986.1| PREDICTED: uncharacterized protein ORF50-like [Xenopus (Silurana) tropicalis] Length = 462 Score = 55.5 bits (132), Expect = 7e-06 Identities = 33/94 (35%), Positives = 47/94 (50%) Frame = -2 Query: 335 IPESPNKLRSGKQIPIAPATSLHEDIPIAPATSLHEDIPIAPATSLHEDTPESPGTLRCG 156 IP +P ++G IP+APA IP+APA IP+AP+ P +P + + G Sbjct: 112 IPVAP-VAQTGTGIPLAPAAQTGTGIPLAPAAQTGTGIPVAPSAQTETGIPVAP-SAQTG 169 Query: 155 EHIPIPPVASLHVGVPEYPNTQRHDGEQTPIAPA 54 IP+ P A G+P P Q G P+AP+ Sbjct: 170 TGIPVAPSAQTETGIPVAPAAQ--TGTGIPVAPS 201