BLASTX nr result
ID: Atropa21_contig00041828
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00041828 (523 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006355632.1| PREDICTED: F-box protein At3g07870-like [Sol... 97 5e-31 ref|XP_006348773.1| PREDICTED: F-box protein At3g07870-like [Sol... 103 9e-31 ref|XP_006348769.1| PREDICTED: uncharacterized protein LOC102593... 129 4e-28 ref|XP_004239427.1| PREDICTED: F-box protein At3g07870-like [Sol... 108 1e-21 ref|XP_006348772.1| PREDICTED: F-box protein At3g07870-like [Sol... 96 4e-18 ref|XP_006348782.1| PREDICTED: F-box protein At3g07870-like [Sol... 71 1e-10 ref|XP_002298144.2| hypothetical protein POPTR_0001s23150g [Popu... 40 2e-06 ref|XP_006368269.1| hypothetical protein POPTR_0001s01140g [Popu... 39 5e-06 ref|XP_002326594.1| predicted protein [Populus trichocarpa] 39 5e-06 ref|XP_004250361.1| PREDICTED: F-box/kelch-repeat protein At3g06... 43 8e-06 >ref|XP_006355632.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum] Length = 401 Score = 96.7 bits (239), Expect(2) = 5e-31 Identities = 54/101 (53%), Positives = 65/101 (64%), Gaps = 3/101 (2%) Frame = +3 Query: 228 KMYHTRSSNFPCILLWDGHTIAFL-ELKADYDYYSCHRNRPIKLSHKFHLPPLEW--NMF 398 KMY+ RSS FP ILL H++ L ELK D + NR I LS +FHLPP + N+ Sbjct: 69 KMYYKRSSYFPSILLSINHSVRLLVELKDDVSH---PLNRTIVLSPRFHLPPTLYTQNLT 125 Query: 399 LIGSCNGLVCLLNGETYDENHSVYINNPLLDEYFILKLPQW 521 LI SCNG +CL NG HSVYI+NPLL EYF +KLP+W Sbjct: 126 LISSCNGFICLFNGSRDAVEHSVYISNPLLGEYFEVKLPKW 166 Score = 63.5 bits (153), Expect(2) = 5e-31 Identities = 36/49 (73%), Positives = 38/49 (77%), Gaps = 2/49 (4%) Frame = +1 Query: 94 RISDVT-MMDLPRVIMVEILSRLPIKSTFCCKTVCKLWYHLF-SDLLRC 234 RIS VT +MDL VIMV+ILSRLPIKS F CK VCKLWYHL SD L C Sbjct: 20 RISHVTGIMDLHIVIMVDILSRLPIKSIFYCKIVCKLWYHLLTSDPLFC 68 >ref|XP_006348773.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum] Length = 371 Score = 103 bits (256), Expect(2) = 9e-31 Identities = 56/101 (55%), Positives = 65/101 (64%), Gaps = 3/101 (2%) Frame = +3 Query: 225 VKMYHTRSSNFPCILLWDG---HTIAFLELKADYDYYSCHRNRPIKLSHKFHLPPLEWNM 395 V MY RS FPCILL +G H++ LELK Y YY RPI L KFH PP + Sbjct: 41 VLMYEKRSLKFPCILLSEGIGEHSL--LELKEGYRYYYGRSKRPIPLIPKFHYPP--GRV 96 Query: 396 FLIGSCNGLVCLLNGETYDENHSVYINNPLLDEYFILKLPQ 518 L+GSCNG +CLLN Y E HSVYI+NPLL EYF +KLP+ Sbjct: 97 SLVGSCNGFICLLNDSMYIEKHSVYISNPLLGEYFEVKLPE 137 Score = 56.2 bits (134), Expect(2) = 9e-31 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = +1 Query: 115 MDLPRVIMVEILSRLPIKSTFCCKTVCKLWYHL 213 MDLP VIM++ILSRLPIKS F CK VCK+WY++ Sbjct: 1 MDLPLVIMIDILSRLPIKSIFRCKCVCKVWYNI 33 >ref|XP_006348769.1| PREDICTED: uncharacterized protein LOC102593140 [Solanum tuberosum] Length = 405 Score = 129 bits (324), Expect = 4e-28 Identities = 67/121 (55%), Positives = 85/121 (70%), Gaps = 10/121 (8%) Frame = +3 Query: 189 CLQTLVSSFFRPVKMYHTRSSNFPCILLWDGHTIA-FLELKADYDYYSCHRNRPIKLSHK 365 C L++S VKMY TRS NFPCILL + +IA LELKADYDYYS RNRP+ L+ + Sbjct: 74 CWYNLLTSDPLFVKMYQTRSCNFPCILLSNDDSIASVLELKADYDYYSRPRNRPVMLTPE 133 Query: 366 FHLPPLE---------WNMFLIGSCNGLVCLLNGETYDENHSVYINNPLLDEYFILKLPQ 518 FH+P + + LIGSCNGL+CL +G+ YDEN+S+YI+NPLL EYF +KLP+ Sbjct: 134 FHIPKHKDRFGYSFDRKKLTLIGSCNGLICLWSGDRYDENYSIYISNPLLGEYFKVKLPE 193 Query: 519 W 521 W Sbjct: 194 W 194 Score = 56.6 bits (135), Expect = 3e-06 Identities = 27/42 (64%), Positives = 31/42 (73%) Frame = +1 Query: 94 RISDVTMMDLPRVIMVEILSRLPIKSTFCCKTVCKLWYHLFS 219 R +VT+MD R IMVEILSRL IK F CKTVCK WY+L + Sbjct: 39 RAYEVTIMDFSREIMVEILSRLTIKPIFRCKTVCKCWYNLLT 80 >ref|XP_004239427.1| PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum] Length = 327 Score = 108 bits (269), Expect = 1e-21 Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 2/99 (2%) Frame = +3 Query: 231 MYHTRSSNFPCILLWDG-HTIAFLELKADYDYYSCHRNRPIKLSHKFHLPPLEWNMFLIG 407 MY TRS FPCI L DG +FLE+K +Y Y+ H NRPI+L+ KFH PP ++FL+G Sbjct: 1 MYQTRSQIFPCIYLIDGVGNPSFLEIKPEYSSYAHHCNRPIQLTPKFHYPP--GSVFLVG 58 Query: 408 SCNGLVCLLNGET-YDENHSVYINNPLLDEYFILKLPQW 521 CNG C +N T D+ HS+YI NPLL EYF +KLP+W Sbjct: 59 LCNGFTCFVNDSTNIDQKHSLYIGNPLLGEYFEVKLPKW 97 >ref|XP_006348772.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum] Length = 326 Score = 96.3 bits (238), Expect = 4e-18 Identities = 58/98 (59%), Positives = 66/98 (67%), Gaps = 2/98 (2%) Frame = +3 Query: 231 MYHTRSS-NFPCILLWDGHTIAFL-ELKADYDYYSCHRNRPIKLSHKFHLPPLEWNMFLI 404 MYH RSS NFPC+LL G+ + FL ELK D Y I LS KFHLP + M LI Sbjct: 1 MYHKRSSSNFPCLLLSIGYPVQFLVELKPDDPY---PLKSTIALSPKFHLPLPD--MRLI 55 Query: 405 GSCNGLVCLLNGETYDENHSVYINNPLLDEYFILKLPQ 518 GSCNG VCLL G YD +HSVYI+NPLL EYF +KLP+ Sbjct: 56 GSCNGFVCLLKGCIYDLDHSVYISNPLLGEYFKVKLPK 93 >ref|XP_006348782.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum] Length = 329 Score = 71.2 bits (173), Expect = 1e-10 Identities = 37/55 (67%), Positives = 41/55 (74%) Frame = +3 Query: 354 LSHKFHLPPLEWNMFLIGSCNGLVCLLNGETYDENHSVYINNPLLDEYFILKLPQ 518 LS KFHLP NM LIGSCNG VCLL G +D +HSVYI+NP L EYF LKLP+ Sbjct: 46 LSPKFHLPSP--NMRLIGSCNGFVCLLKGWMFDLDHSVYISNPPLGEYFKLKLPK 98 >ref|XP_002298144.2| hypothetical protein POPTR_0001s23150g [Populus trichocarpa] gi|550347962|gb|EEE82949.2| hypothetical protein POPTR_0001s23150g [Populus trichocarpa] Length = 370 Score = 40.0 bits (92), Expect(2) = 2e-06 Identities = 18/33 (54%), Positives = 23/33 (69%) Frame = +1 Query: 121 LPRVIMVEILSRLPIKSTFCCKTVCKLWYHLFS 219 LP I V+ILSRLP+++ CK+VCK W L S Sbjct: 24 LPAEIFVDILSRLPVEAMTQCKSVCKSWRDLLS 56 Score = 37.0 bits (84), Expect(2) = 2e-06 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Frame = +3 Query: 324 YSCH---------RNRPIKLSHKFHLPPLEWNMFLIGSCNGLVCLLNGETYDENHSVYIN 476 Y CH N + + KF LP + ++GS NGL+CL E + YI Sbjct: 86 YCCHIHSSRSSNINNAMVSMPRKFKLPKNTFRGKVVGSSNGLLCL--SEIHRMKKKFYIC 143 Query: 477 NPLLDEY 497 NP+ EY Sbjct: 144 NPITGEY 150 >ref|XP_006368269.1| hypothetical protein POPTR_0001s01140g [Populus trichocarpa] gi|550346173|gb|ERP64838.1| hypothetical protein POPTR_0001s01140g [Populus trichocarpa] Length = 477 Score = 38.9 bits (89), Expect(2) = 5e-06 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 9/104 (8%) Frame = +3 Query: 228 KMYHTRSSNFPCILLWDGH---------TIAFLELKADYDYYSCHRNRPIKLSHKFHLPP 380 K++HTR+ P L+ H ++ L+L+A C + +KLS F P Sbjct: 73 KLHHTRA---PASLILRSHRHGRRRRPRSLCLLDLEASD---ICSPDAAVKLSPDFGFPT 126 Query: 381 LEWNMFLIGSCNGLVCLLNGETYDENHSVYINNPLLDEYFILKL 512 N ++ +CNGL+C+ + + + + I NPL+ +Y L L Sbjct: 127 --GNFEIVNTCNGLICIRH---FHSPNDISILNPLVGDYITLPL 165 Score = 37.0 bits (84), Expect(2) = 5e-06 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = +1 Query: 121 LPRVIMVEILSRLPIKSTFCCKTVCKLWYHL 213 LP +V+ILSRLP K+ F C VCK W L Sbjct: 35 LPIQNLVDILSRLPFKTIFSCMCVCKKWKDL 65 >ref|XP_002326594.1| predicted protein [Populus trichocarpa] Length = 477 Score = 38.9 bits (89), Expect(2) = 5e-06 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 9/104 (8%) Frame = +3 Query: 228 KMYHTRSSNFPCILLWDGH---------TIAFLELKADYDYYSCHRNRPIKLSHKFHLPP 380 K++HTR+ P L+ H ++ L+L+A C + +KLS F P Sbjct: 73 KLHHTRA---PASLILRSHRHGRRRRPRSLCLLDLEASD---ICSPDAAVKLSPDFGFPT 126 Query: 381 LEWNMFLIGSCNGLVCLLNGETYDENHSVYINNPLLDEYFILKL 512 N ++ +CNGL+C+ + + + + I NPL+ +Y L L Sbjct: 127 --GNFEIVNTCNGLICIRH---FHSPNDISILNPLVGDYITLPL 165 Score = 37.0 bits (84), Expect(2) = 5e-06 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = +1 Query: 121 LPRVIMVEILSRLPIKSTFCCKTVCKLWYHL 213 LP +V+ILSRLP K+ F C VCK W L Sbjct: 35 LPIQNLVDILSRLPFKTIFSCMCVCKKWKDL 65 >ref|XP_004250361.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum lycopersicum] Length = 383 Score = 43.1 bits (100), Expect(2) = 8e-06 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = +3 Query: 282 HTIAFLELKADYDYYSCHRNRPI-KLSHKFHLPPLEWNMFLIGSCNGLVCLLNGETYDEN 458 +T+ FL+ DY++ + PI + + H P +++ FL+GS +G VC +D Sbjct: 71 NTLKFLKFVVDYNF----DHDPIGDVDLQLHFPVVQF--FLVGSVHGFVCF--NYFFDSV 122 Query: 459 HSVYINNPLLDEYFILKLPQ 518 S+YI NP EY +L+ PQ Sbjct: 123 DSIYILNPTTREYIVLREPQ 142 Score = 32.0 bits (71), Expect(2) = 8e-06 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = +1 Query: 106 VTMMDLPRVIMVEILSRLPIKSTFCCKTVCKLWYHL-----FSDLLRCITQDHLIFHAFC 270 +++MDLP I++ ILS LP + KT+ K +L F L R + +I H F Sbjct: 7 LSLMDLPSPILLRILSTLPPTTLLYVKTLSKTLLNLTLDSEFLKLSRSSSPAIIIIHQFN 66 Query: 271 FGMVTLLLFL 300 L FL Sbjct: 67 SNRTNTLKFL 76