BLASTX nr result
ID: Atropa21_contig00041780
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00041780
(573 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362268.1| PREDICTED: pentatricopeptide repeat-containi... 93 1e-33
ref|XP_006348039.1| PREDICTED: pentatricopeptide repeat-containi... 62 4e-18
gb|EMJ05620.1| hypothetical protein PRUPE_ppa1027225mg [Prunus p... 74 3e-15
gb|EOY08857.1| Pentatricopeptide repeat-containing protein isofo... 70 1e-14
ref|XP_004252011.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-14
gb|EOY08858.1| Pentatricopeptide repeat-containing protein isofo... 70 2e-14
ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containi... 67 9e-14
ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citr... 64 9e-14
ref|XP_002535692.1| conserved hypothetical protein [Ricinus comm... 67 1e-13
ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-13
ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Popu... 64 1e-12
ref|NP_178143.1| pentatricopeptide repeat-containing protein [Ar... 65 1e-12
ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arab... 66 2e-12
ref|XP_002322619.2| hypothetical protein POPTR_0016s03540g [Popu... 61 8e-12
ref|XP_004493397.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-11
ref|XP_004493398.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-11
gb|ABA39836.1| putative DNA-binding protein [Solanum lycopersicum] 60 4e-11
emb|CBI30135.3| unnamed protein product [Vitis vinifera] 55 5e-10
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ... 45 5e-10
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi... 55 5e-10
>ref|XP_006362268.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Solanum tuberosum]
Length = 613
Score = 93.2 bits (230), Expect(2) = 1e-33
Identities = 53/98 (54%), Positives = 62/98 (63%), Gaps = 19/98 (19%)
Frame = -2
Query: 260 NGEDELVSEPELSGDDVETPH-------------------KKNSMELLKAITAAPLLVLD 138
N E EL + ++ G+DVE PH +K MELLKAITAAP+L LD
Sbjct: 109 NVEAELCKD-DVDGEDVEMPHDKLELSDSESDARQGESLREKVPMELLKAITAAPVLSLD 167
Query: 137 RVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQVF 24
RVMD+W+EKGNDLTRTEIT YLR RHMY R LQ+F
Sbjct: 168 RVMDEWIEKGNDLTRTEITFIRIYLRRRHMYKRALQLF 205
Score = 76.3 bits (186), Expect(2) = 1e-33
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = -1
Query: 519 SRSSRISCTTNEVTGRYSEGNSQGISNEISN*SLSFRGFCKTAHCSWDVKISLLW 355
SRSSRI C N+VTGRYSEGNS+GISNEIS+ LSFRGFCKTAH S K+ L W
Sbjct: 18 SRSSRIRCMMNKVTGRYSEGNSEGISNEISDQYLSFRGFCKTAHGS---KLFLGW 69
Score = 60.5 bits (145), Expect = 3e-07
Identities = 50/110 (45%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
Frame = -3
Query: 550 MWALRRSSSSFKIFSN*LYDERSNR*--IF*RKQSRDFK*NIKLISF-----------F* 410
MWA+RRSSSS K + RS+R + + R + N + IS F
Sbjct: 1 MWAIRRSSSSLKKQG---FISRSSRIRCMMNKVTGRYSEGNSEGISNEISDQYLSFRGFC 57
Query: 409 RILQDSSLFLG-RQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETEIMLE 263
+ S LFLG ++ F SLVGTK+SSEIDS+LDD FSEL GPT T+ MLE
Sbjct: 58 KTAHGSKLFLGWKKIFFSLVGTKSSSEIDSNLDDEFSELMGPTVTKGMLE 107
>ref|XP_006348039.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Solanum tuberosum]
Length = 624
Score = 62.0 bits (149), Expect(3) = 4e-18
Identities = 42/100 (42%), Positives = 53/100 (53%), Gaps = 22/100 (22%)
Frame = -2
Query: 260 NGEDELVSEPELS-----GDDVETPHK---------------KN--SMELLKAITAAPLL 147
N DE VSE ELS G+DVE P + +N S L AI AAP L
Sbjct: 112 NKVDESVSEHELSEEDLDGEDVEAPQELLSDTEAEINKRKSPRNGVSSALFNAIMAAPAL 171
Query: 146 VLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQV 27
+ ++MDKWVE GN++TR E+ M R R MYG+ LQ+
Sbjct: 172 PVSKIMDKWVE-GNNVTRVEVAAAMLNFRKRRMYGKALQL 210
Score = 44.3 bits (103), Expect(3) = 4e-18
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -3
Query: 388 LFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETEIMLE 263
+F ++FSS GTK S E DS DDGFSELE T TE + E
Sbjct: 69 VFRESRSFSSQAGTKRSGEEDSSSDDGFSELESSTATEAIQE 110
Score = 30.8 bits (68), Expect(3) = 4e-18
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -1
Query: 540 FVDHLLPSRSSRISCTTNEVTGRYSEGNSQGI---SNEISN*SLSFRGFCKTAH 388
F + + SRI T++++ + +G++ G+ SN IS+ L++RGF T+H
Sbjct: 11 FKKQVFMTGGSRICYATSDISSQCLKGHNDGLKGDSNVISHRPLTYRGFQITSH 64
>gb|EMJ05620.1| hypothetical protein PRUPE_ppa1027225mg [Prunus persica]
Length = 611
Score = 73.6 bits (179), Expect(2) = 3e-15
Identities = 42/97 (43%), Positives = 52/97 (53%), Gaps = 21/97 (21%)
Frame = -2
Query: 254 EDELVSEPELSGDDVE---------------------TPHKKNSMELLKAITAAPLLVLD 138
EDEL+SEPELS D+ E +P K+N EL KAI A P +
Sbjct: 101 EDELISEPELSEDEEEVEPSQHELELSENGADSIEKRSPRKRNVSELFKAILAFPAFSVH 160
Query: 137 RVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQV 27
+DKWV+ GNDL R EI+L M R R M+GR LQ+
Sbjct: 161 GALDKWVKAGNDLNRAEISLAMFNFRKRQMFGRALQL 197
Score = 33.9 bits (76), Expect(2) = 3e-15
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = -3
Query: 376 RQNFSSLVGTKTSSEIDSDLDDGFSELE-------GPTETEIMLEP 260
R++FSS G ++S E D DL+DGFSELE E E++ EP
Sbjct: 64 RRSFSSQAGAESSGEKD-DLEDGFSELETLPSAEASQHEDELISEP 108
>gb|EOY08857.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
cacao]
Length = 623
Score = 70.5 bits (171), Expect(2) = 1e-14
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 22/103 (21%)
Frame = -2
Query: 269 ARTNGEDELVSEPELSGDD-----------------VETPHKKNSM-----ELLKAITAA 156
A+ ED L+S+PELSGD+ + KK+S EL KA+ AA
Sbjct: 107 AQDKAEDGLISDPELSGDEEDIEETAKNELELSEDETDLSDKKSSTRRIVSELFKAVIAA 166
Query: 155 PLLVLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQV 27
P L + +V+DKW+E+G RTEI++ M LR R MYGR LQ+
Sbjct: 167 PGLSVHKVLDKWLEEGKAFNRTEISVAMLNLRKRRMYGRALQL 209
Score = 34.7 bits (78), Expect(2) = 1e-14
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Frame = -3
Query: 550 MWALRR-------------SSSSFKIFSN*LYDERSNR*IF*RKQSRDFK*NIKLISFF* 410
MWALRR +S+ +I SN + + IF Q+ K L+ F+
Sbjct: 1 MWALRRVANPLKDRRISIQASAKLQISSNYIDGKAV---IFESSQTISDK-RPSLLRFYH 56
Query: 409 RILQDSSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETE 275
+ +GR SS G ++S E D +L+DGFSELE P E
Sbjct: 57 SRHASCNFSVGRCGLSSQAGAESSGEED-ELEDGFSELETPATAE 100
>ref|XP_004252011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial [Solanum lycopersicum]
Length = 624
Score = 60.5 bits (145), Expect(2) = 2e-14
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = -2
Query: 260 NGED-----ELVSEPELSGDDVETPHKKNSMELLKAITAAPLLVLDRVMDKWVEKGNDLT 96
+GED EL+S+ E + ++P S L A+ AAP L + ++MDKWVE GN++T
Sbjct: 129 DGEDVEAPQELLSDTEAEINKRKSPRNGVSSALFNAVMAAPALRVSKIMDKWVE-GNNVT 187
Query: 95 RTEITLTMRYLRNRHMYGRMLQV 27
R E+ M R R MYG+ LQ+
Sbjct: 188 RVEVASAMLNFRKRRMYGKALQL 210
Score = 44.3 bits (103), Expect(2) = 2e-14
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 20/116 (17%)
Frame = -3
Query: 550 MWALRRSSSSFK--IF----SN*LYDERSNR*IF*RKQSRDFK*NIKLISF--------- 416
MWA+RR+SSSFK +F S Y + + K + +IS
Sbjct: 1 MWAVRRASSSFKKQVFITGGSRICYSTLDITSHCLKGHNDGLKGDSNVISHRALTLGGYQ 60
Query: 415 -----F*RILQDSSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETEIMLE 263
F R+ ++S ++FSS GTK+S E DS+ DDGFSELE + TE + E
Sbjct: 61 ITSHGFLRVFKES------RSFSSQAGTKSSGEEDSNSDDGFSELESSSATEAIQE 110
>gb|EOY08858.1| Pentatricopeptide repeat-containing protein isoform 2, partial
[Theobroma cacao]
Length = 621
Score = 70.5 bits (171), Expect(2) = 2e-14
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 22/103 (21%)
Frame = -2
Query: 269 ARTNGEDELVSEPELSGDD-----------------VETPHKKNSM-----ELLKAITAA 156
A+ ED L+S+PELSGD+ + KK+S EL KA+ AA
Sbjct: 105 AQDKAEDGLISDPELSGDEEDIEETAKNELELSEDETDLSDKKSSTRRIVSELFKAVIAA 164
Query: 155 PLLVLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQV 27
P L + +V+DKW+E+G RTEI++ M LR R MYGR LQ+
Sbjct: 165 PGLSVHKVLDKWLEEGKAFNRTEISVAMLNLRKRRMYGRALQL 207
Score = 33.9 bits (76), Expect(2) = 2e-14
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -3
Query: 382 LGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETE 275
+GR SS G ++S E D +L+DGFSELE P E
Sbjct: 64 VGRCGLSSQAGAESSGEED-ELEDGFSELETPATAE 98
>ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 625
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 21/104 (20%)
Frame = -2
Query: 275 NHARTNGEDELVSEPELSGDDVETPHKKNSMEL---------------------LKAITA 159
++A EDELVS PE+S D+ + +N +EL KAI
Sbjct: 108 SNANDENEDELVSGPEISDDEADIEPSQNELELSEIETDLNDKLSPRRRDVSALFKAILE 167
Query: 158 APLLVLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQV 27
P + +DKWV++GNDL+R EI+LT LR R M+GR LQ+
Sbjct: 168 FPGFSVHSALDKWVKEGNDLSRAEISLTKINLRRRRMFGRALQL 211
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = -3
Query: 394 SSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETEIM 269
S + R + SS GT++S E D DL+DGFS+LE P E++
Sbjct: 65 SKFSVDRCSLSSQAGTESSGEED-DLEDGFSKLETPPTAEVV 105
>ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citrus clementina]
gi|557532608|gb|ESR43791.1| hypothetical protein
CICLE_v10011296mg [Citrus clementina]
Length = 623
Score = 63.5 bits (153), Expect(2) = 9e-14
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 22/102 (21%)
Frame = -2
Query: 266 RTNGEDE----LVSEPELSGD--DVE----------------TPHKKNSMELLKAITAAP 153
++ EDE L+SE ELSGD D+E TP K+ +L KAI AP
Sbjct: 108 KSMAEDEKEYGLISESELSGDHDDIENDLELSETETEASRKTTPSKRKFSKLFKAIMDAP 167
Query: 152 LLVLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQV 27
+ + + K+ E+GNDL+R EI L M LR R MYG+ LQ+
Sbjct: 168 DISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQL 209
Score = 38.9 bits (89), Expect(2) = 9e-14
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = -3
Query: 433 IKLISFF*RILQDSSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETEIMLEPM 257
+ L+ F+ + S+ F GR+ SS G ++S E D DL++GFSELE P + + + M
Sbjct: 53 LPLLRFYHQPHDCSNFFGGRRGLSSQAGAESSGEED-DLEEGFSELETPATADAVQKSM 110
>ref|XP_002535692.1| conserved hypothetical protein [Ricinus communis]
gi|223522266|gb|EEF26691.1| conserved hypothetical
protein [Ricinus communis]
Length = 194
Score = 67.0 bits (162), Expect(3) = 1e-13
Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 20/102 (19%)
Frame = -2
Query: 275 NHARTNGEDELVSEPELSGDDVE--------------------TPHKKNSMELLKAITAA 156
++A EDEL SEPEL DD + T K+ EL K I AA
Sbjct: 93 SNAVGGNEDELFSEPELDDDDGDSGAKNALELSDTEAGSGKKTTVRKRVPSELFKTIIAA 152
Query: 155 PLLVLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQ 30
P + L V++KWVE+G L R EI+L M LR R MYGR LQ
Sbjct: 153 PNVPLSVVLNKWVEEGKTLGRPEISLAMLNLRKRRMYGRALQ 194
Score = 33.9 bits (76), Expect(3) = 1e-13
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = -3
Query: 394 SSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETEIMLE 263
S + R++ SS G++ SS+ + DL+DGFSELE P + E
Sbjct: 50 SKFHIDRRSLSSKAGSE-SSKSEDDLEDGFSELETPANANTIDE 92
Score = 20.8 bits (42), Expect(3) = 1e-13
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 513 SSRISCTTNEVTGRYSEGN 457
+SRI C +E+ + EGN
Sbjct: 8 TSRICCAKSEMFSSHLEGN 26
>ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Citrus sinensis]
Length = 623
Score = 64.3 bits (155), Expect(2) = 3e-13
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 18/93 (19%)
Frame = -2
Query: 254 EDELVSEPELSGD--DVE----------------TPHKKNSMELLKAITAAPLLVLDRVM 129
ED L+SE ELSGD D+E TP K+ +L KAI AP + + +
Sbjct: 116 EDGLISESELSGDHDDIENDLELSETETEPSRKTTPSKRKLSKLFKAIMDAPDISNNSTL 175
Query: 128 DKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQ 30
+VE+GNDL+R EI+L M LR R MYG+ LQ
Sbjct: 176 TTYVEEGNDLSRAEISLAMANLRTRRMYGKALQ 208
Score = 36.2 bits (82), Expect(2) = 3e-13
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -3
Query: 433 IKLISFF*RILQDSSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETE 275
+ L+ F+ + S F GR+ SS G ++S E D D ++GFSELE P T+
Sbjct: 53 LPLLRFYHQPHDCSIFFGGRRGLSSQAGAESSGEED-DWEEGFSELETPATTD 104
>ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Populus trichocarpa]
gi|550335400|gb|EEE92411.2| hypothetical protein
POPTR_0006s03790g [Populus trichocarpa]
Length = 623
Score = 64.3 bits (155), Expect(2) = 1e-12
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 23/105 (21%)
Frame = -2
Query: 272 HARTNGEDELVSEPELSGDDVET-----------------------PHKKNSMELLKAIT 162
+A ED+L+SEPELS DD + P K+ + EL AI
Sbjct: 105 NALAGNEDQLISEPELSDDDNDDIGEPSQNALELSDNETDSVVKSLPRKRPTTELFNAIV 164
Query: 161 AAPLLVLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQV 27
+A + + V+DKWV +G DL R EI+ M LR R M+GR LQ+
Sbjct: 165 SASDVSVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQL 209
Score = 34.3 bits (77), Expect(2) = 1e-12
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -3
Query: 394 SSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGP 287
S +L ++ F+S G + S D DL+DGFSELE P
Sbjct: 62 SKFYLEKRGFASQAGAENSGS-DVDLEDGFSELETP 96
>ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical
protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis
thaliana] gi|20259918|gb|AAM13306.1| unknown protein
[Arabidopsis thaliana] gi|332198258|gb|AEE36379.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332198259|gb|AEE36380.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 64.7 bits (156), Expect(2) = 1e-12
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = -2
Query: 275 NHARTNGEDELVSEPELSGDDV--ETPHKKNSMELLKAITAAPLLVLDRVMDKWVEKGND 102
+ + + ++E E +L DV +T KK S EL K I +AP L + +DKWVE+GN+
Sbjct: 99 DEGKLSADEEEEEELDLIETDVSRKTVEKKQS-ELFKTIVSAPGLSIGSALDKWVEEGNE 157
Query: 101 LTRTEITLTMRYLRNRHMYGRMLQV 27
+TR EI M LR R MYGR LQ+
Sbjct: 158 ITRVEIAKAMLQLRRRRMYGRALQM 182
Score = 33.9 bits (76), Expect(2) = 1e-12
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3
Query: 382 LGRQNFSSLVGTKTSSEIDSDLDDGFSELEG 290
L + SS GTK+ E D DL+DGFSELEG
Sbjct: 57 LSNRALSSSAGTKSDQEED-DLEDGFSELEG 86
>ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata] gi|297335142|gb|EFH65560.1| hypothetical protein
ARALYDRAFT_477224 [Arabidopsis lyrata subsp. lyrata]
Length = 597
Score = 65.9 bits (159), Expect(2) = 2e-12
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = -2
Query: 275 NHARTNGEDELVSEPELSGDDVETPHKKNSMELLKAITAAPLLVLDRVMDKWVEKGNDLT 96
+ + + ++E E +L D +T KK S EL K I +AP L + +DKWVE+GN++T
Sbjct: 102 DEGKLSADEEEELELDLIDDSNKTVEKKPS-ELFKTIVSAPGLSIGSALDKWVEEGNEIT 160
Query: 95 RTEITLTMRYLRNRHMYGRMLQV 27
R E+ M LR R MYGR LQ+
Sbjct: 161 RVEVAKAMLQLRRRRMYGRALQL 183
Score = 32.3 bits (72), Expect(2) = 2e-12
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -3
Query: 385 FLGRQNFSSLVGTKTSSEIDSDLDDGFSEL 296
FL ++ SS GTK+ E D DL+DGFSEL
Sbjct: 59 FLSKRALSSNAGTKSDQEED-DLEDGFSEL 87
>ref|XP_002322619.2| hypothetical protein POPTR_0016s03540g [Populus trichocarpa]
gi|550320743|gb|EEF04380.2| hypothetical protein
POPTR_0016s03540g [Populus trichocarpa]
Length = 618
Score = 61.2 bits (147), Expect(2) = 8e-12
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 23/97 (23%)
Frame = -2
Query: 248 ELVSEPELSGDDVET-----------------------PHKKNSMELLKAITAAPLLVLD 138
+L+SEPELS DD P KK EL KAI +AP + +
Sbjct: 108 QLISEPELSDDDTNDIGEPSQNALELSDNETDPAEKRLPRKKAPSELFKAIISAPGVSVH 167
Query: 137 RVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQV 27
V+DKWV +G DL + EI+ M LR R ++GR LQ+
Sbjct: 168 SVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQL 204
Score = 34.7 bits (78), Expect(2) = 8e-12
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -3
Query: 394 SSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGP 287
S +L ++ F+S G + SSE D DL+D FSELE P
Sbjct: 62 SKFYLEKRGFASQAGAE-SSESDEDLEDEFSELETP 96
>ref|XP_004493397.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like isoform X1 [Cicer arietinum]
Length = 609
Score = 60.8 bits (146), Expect(2) = 1e-11
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = -2
Query: 263 TNGEDELVSEPELSGDDVETPHKKNSMELLKAITAAPLLVLDRVMDKWVEKGNDLTRTEI 84
++ EDELV+ + S K+ EL K I AP L + +DKWVE+G +L+R EI
Sbjct: 125 SHDEDELVTVKKSS-------QKRVLSELFKDIMDAPGLSVRTALDKWVEEGKELSREEI 177
Query: 83 TLTMRYLRNRHMYGRMLQV 27
+LTM LR R MYGR LQ+
Sbjct: 178 SLTMANLRRRKMYGRALQL 196
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 394 SSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPT--ETEIMLE 263
S L R FSS GTK D DL+DGFSELE P E+E +L+
Sbjct: 65 SGLGSSRCEFSSQAGTKD----DDDLEDGFSELETPLGYESEKLLD 106
>ref|XP_004493398.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like isoform X2 [Cicer arietinum]
Length = 603
Score = 60.8 bits (146), Expect(2) = 1e-11
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = -2
Query: 263 TNGEDELVSEPELSGDDVETPHKKNSMELLKAITAAPLLVLDRVMDKWVEKGNDLTRTEI 84
++ EDELV+ + S K+ EL K I AP L + +DKWVE+G +L+R EI
Sbjct: 119 SHDEDELVTVKKSS-------QKRVLSELFKDIMDAPGLSVRTALDKWVEEGKELSREEI 171
Query: 83 TLTMRYLRNRHMYGRMLQV 27
+LTM LR R MYGR LQ+
Sbjct: 172 SLTMANLRRRKMYGRALQL 190
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 394 SSLFLGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPT--ETEIMLE 263
S L R FSS GTK D DL+DGFSELE P E+E +L+
Sbjct: 59 SGLGSSRCEFSSQAGTKD----DDDLEDGFSELETPLGYESEKLLD 100
>gb|ABA39836.1| putative DNA-binding protein [Solanum lycopersicum]
Length = 156
Score = 60.5 bits (145), Expect(2) = 4e-11
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = -2
Query: 260 NGED-----ELVSEPELSGDDVETPHKKNSMELLKAITAAPLLVLDRVMDKWVEKGNDLT 96
+GED EL+S+ E + ++P S L A+ AAP L + ++MDKWVE GN++T
Sbjct: 53 DGEDVEAPQELLSDTEAEINKRKSPRNGVSSALFNAVMAAPALRVSKIMDKWVE-GNNVT 111
Query: 95 RTEITLTMRYLRNRHMYGRMLQV 27
R E+ M R R MYG+ LQ+
Sbjct: 112 RVEVASAMLNFRKRRMYGKALQL 134
Score = 33.1 bits (74), Expect(2) = 4e-11
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 361 SLVGTKTSS-EIDSDLDDGFSELEGPTETEIMLE 263
S G K SS E DS+ DDGFSELE + TE + E
Sbjct: 1 SYAGNKESSREEDSNSDDGFSELESSSATEAIQE 34
>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 55.5 bits (132), Expect(2) = 5e-10
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Frame = -2
Query: 269 ARTNGEDELVSEPELSGDDVET-------------------PHKKNSMELLKAITAAPLL 147
A + EDEL+S+P+ D++E+ P K+ S EL KAI AA
Sbjct: 111 AESEHEDELLSDPKSDDDEIESTQNELEPLDTDTDVSEKRSPRKRVSSELFKAIMAASDQ 170
Query: 146 VLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQ 30
+ V++KW ++G D++R EI TM LR M+ + LQ
Sbjct: 171 PIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQ 209
Score = 34.3 bits (77), Expect(2) = 5e-10
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -3
Query: 382 LGRQNFSSLVGTKTSSEIDSDLDDGFSELE 293
+G +FSS G K+S E D DL+DGFSELE
Sbjct: 70 MGSCSFSSQAGAKSSGEED-DLEDGFSELE 98
>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 623
Score = 45.4 bits (106), Expect(2) = 5e-10
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = -2
Query: 218 DDVET----PHKKNSMELLKAITAAPLLVLDRVMDKWVEKGNDLTRTEITLTMRYLRNRH 51
D+V T K+ EL KAI + ++KWVE G +L+R EI+LTM LR R
Sbjct: 143 DEVSTGKRSSRKRADSELFKAIMNGTGPTIYTALEKWVEDGKELSREEISLTMINLRRRK 202
Query: 50 MYGRMLQV 27
+Y + LQ+
Sbjct: 203 IYLKALQL 210
Score = 44.3 bits (103), Expect(2) = 5e-10
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = -3
Query: 382 LGRQNFSSLVGTKTSSEIDSDLDDGFSELEGPTETE 275
LGR FSS G KT+ E D DL+DGFSELE P E
Sbjct: 72 LGRLGFSSEAGAKTTKEEDDDLEDGFSELETPLGEE 107
>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 55.5 bits (132), Expect(2) = 5e-10
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Frame = -2
Query: 269 ARTNGEDELVSEPELSGDDVET-------------------PHKKNSMELLKAITAAPLL 147
A + EDEL+S+P+ D++E+ P K+ S EL KAI AA
Sbjct: 74 AESEHEDELLSDPKSDDDEIESTQNELEPLDTDTDVSEKRSPRKRVSSELFKAIMAASDQ 133
Query: 146 VLDRVMDKWVEKGNDLTRTEITLTMRYLRNRHMYGRMLQ 30
+ V++KW ++G D++R EI TM LR M+ + LQ
Sbjct: 134 PIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQ 172
Score = 34.3 bits (77), Expect(2) = 5e-10
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -3
Query: 382 LGRQNFSSLVGTKTSSEIDSDLDDGFSELE 293
+G +FSS G K+S E D DL+DGFSELE
Sbjct: 33 MGSCSFSSQAGAKSSGEED-DLEDGFSELE 61