BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041696
         (726 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   128   8e-46
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   128   8e-46
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        129   6e-44
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   110   3e-41
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   114   2e-40
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   114   2e-40
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                115   2e-40
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               115   2e-40
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     116   2e-40
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   115   3e-40
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     115   3e-40
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   114   4e-40
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         117   8e-40
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           117   8e-40
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   111   1e-39
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   105   1e-38
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   105   1e-38
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   105   1e-38
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   105   1e-38
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...   111   1e-38

>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  128 bits (321), Expect(2) = 8e-46
 Identities = 60/114 (52%), Positives = 87/114 (76%)
 Frame = +3

Query: 174  VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
            V  TP + NGVAE++N TL++++ CM + A +SK F  EAV+T ++ VNRSP++AIDFKT
Sbjct: 898  VRHTP-QQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKT 956

Query: 354  PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
            P +V SG+PSNYS L++FGCP Y +V++GKL+ R+ K +F+GY  G+K Y+  C
Sbjct: 957  PQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWC 1010



 Score = 82.8 bits (203), Expect(2) = 8e-46
 Identities = 35/62 (56%), Positives = 47/62 (75%)
 Frame = +2

Query: 2    HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
            +FLKAK +VF  FKEWK +VE +  + +K LR DNGLEFC++DF+ FC+  GI RH ++R
Sbjct: 840  YFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVR 899

Query: 182  HT 187
            HT
Sbjct: 900  HT 901


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  128 bits (321), Expect(2) = 8e-46
 Identities = 60/114 (52%), Positives = 87/114 (76%)
 Frame = +3

Query: 174  VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
            V  TP + NGVAE++N TL++++ CM + A +SK F  EAV+T ++ VNRSP++AIDFKT
Sbjct: 685  VRHTP-QQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKT 743

Query: 354  PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
            P +V SG+PSNYS L++FGCP Y +V++GKL+ R+ K +F+GY  G+K Y+  C
Sbjct: 744  PQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWC 797



 Score = 82.8 bits (203), Expect(2) = 8e-46
 Identities = 35/62 (56%), Positives = 47/62 (75%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLKAK +VF  FKEWK +VE +  + +K LR DNGLEFC++DF+ FC+  GI RH ++R
Sbjct: 627 YFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVR 686

Query: 182 HT 187
           HT
Sbjct: 687 HT 688


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  129 bits (325), Expect(2) = 6e-44
 Identities = 58/108 (53%), Positives = 84/108 (77%)
 Frame = +3

Query: 192 EHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKTPNKV*S 371
           + NG+AE++N TL++K+ CML+ +K+ + F  EAV+T S+ VNRSP+SAI FKTP ++ +
Sbjct: 581 QQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFKTPEELWN 640

Query: 372 GEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           G+P+NY  LRVFGCP Y ++N+GKL+ R+ K +FVGY DG+K YK  C
Sbjct: 641 GKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWC 688



 Score = 75.1 bits (183), Expect(2) = 6e-44
 Identities = 34/62 (54%), Positives = 41/62 (66%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           + LK K    E FK WK LVENQ   K+K LR DNGLEFCS+ F  +C+ HGI RH ++R
Sbjct: 518 YILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVFEEYCQKHGIKRHKTVR 577

Query: 182 HT 187
            T
Sbjct: 578 FT 579


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  110 bits (276), Expect(3) = 3e-41
 Identities = 54/111 (48%), Positives = 78/111 (70%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++N TLLE++ CML  A + + F  EAV T  + +NR P + I  KT
Sbjct: 564 VRNTP-QQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKT 622

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYK 506
           P ++ SG+ ++YS L+ FGC  YY+V+EGKL+ R+KK +FVGY DG+K ++
Sbjct: 623 PMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFR 673



 Score = 81.3 bits (199), Expect(3) = 3e-41
 Identities = 35/62 (56%), Positives = 47/62 (75%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           + +K K + F+ FKEWKIL+ENQ  +KIK LR DNGLEFC  +F+ FCK  GI+RH ++R
Sbjct: 506 YMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVR 565

Query: 182 HT 187
           +T
Sbjct: 566 NT 567



 Score = 24.3 bits (51), Expect(3) = 3e-41
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
 Frame = +1

Query: 529 IVSRDVIFD*SYILDPHKVV--------------VEFSINKNNE*VELIKEKDQETKVE- 663
           I+SR+V+FD S +L    +V              VEF + +N   ++  +E+DQE + E 
Sbjct: 683 IMSRNVVFDESPLL--RTIVKPTTTSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTET 740

Query: 664 --DESKDIDLEELIVNE 708
              ES   D+ + I  +
Sbjct: 741 DIPESMPSDIHQSIAQD 757


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  114 bits (286), Expect(2) = 2e-40
 Identities = 58/114 (50%), Positives = 78/114 (68%)
 Frame = +3

Query: 174  VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
            V  TP + NGVAE++N T++ K+ C+L  A + K F  EAV T  + +NRSP+ AID KT
Sbjct: 793  VPHTP-QQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKT 851

Query: 354  PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
            P +V SG P+NYS LRVFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 852  PIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 905



 Score = 78.6 bits (192), Expect(2) = 2e-40
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F+ FKEWK +VE Q ++K+K LR DNG+EFCS+ F ++CK  GI RH ++ 
Sbjct: 735 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVP 794

Query: 182 HT 187
           HT
Sbjct: 795 HT 796


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  114 bits (286), Expect(2) = 2e-40
 Identities = 58/114 (50%), Positives = 78/114 (68%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++N T++ K+ C+L  A + K F  EAV T  + +NRSP+ AID KT
Sbjct: 586 VPHTP-QQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKT 644

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P +V SG P+NYS LRVFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 645 PIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 698



 Score = 78.6 bits (192), Expect(2) = 2e-40
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F+ FKEWK +VE Q ++K+K LR DNG+EFCS+ F ++CK  GI RH ++ 
Sbjct: 528 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVP 587

Query: 182 HT 187
           HT
Sbjct: 588 HT 589


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  115 bits (287), Expect(2) = 2e-40
 Identities = 59/114 (51%), Positives = 77/114 (67%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++N T++ K+ CML  A + K F  EAV T  + +NRSP  AID KT
Sbjct: 571 VPHTP-QQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKT 629

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P KV SG P+NYS L+VFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 630 PIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWC 683



 Score = 78.2 bits (191), Expect(2) = 2e-40
 Identities = 33/62 (53%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F  FKEWK +VE Q ++K+K LR DNG+EFCS+ F ++CK  GI RH ++ 
Sbjct: 513 YFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVP 572

Query: 182 HT 187
           HT
Sbjct: 573 HT 574


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  115 bits (287), Expect(2) = 2e-40
 Identities = 59/114 (51%), Positives = 77/114 (67%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++N T++ K+ CML  A + K F  EAV T  + +NRSP  AID KT
Sbjct: 403 VPHTP-QQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKT 461

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P KV SG P+NYS L+VFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 462 PIKVWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWC 515



 Score = 78.2 bits (191), Expect(2) = 2e-40
 Identities = 33/62 (53%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F  FKEWK +VE Q ++K+K LR DNG+EFCS+ F ++CK  GI RH ++ 
Sbjct: 345 YFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVP 404

Query: 182 HT 187
           HT
Sbjct: 405 HT 406


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  116 bits (291), Expect(2) = 2e-40
 Identities = 59/114 (51%), Positives = 78/114 (68%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++N T++ K+ CML  A + K F  EAV T  + +NRSP+ AID KT
Sbjct: 495 VPHTP-QQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKT 553

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P +V SG P+NYS LRVFGC  Y +V+ GKL+ R  K +F+GY+ G+K YK  C
Sbjct: 554 PIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWC 607



 Score = 76.3 bits (186), Expect(2) = 2e-40
 Identities = 32/62 (51%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F+ FKEWK +VE Q ++K+K LR DNG+E CS+ F ++CK  GI RH ++ 
Sbjct: 437 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVP 496

Query: 182 HT 187
           HT
Sbjct: 497 HT 498


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  115 bits (289), Expect(2) = 3e-40
 Identities = 58/114 (50%), Positives = 78/114 (68%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++N+ ++ K+ CML  A + K F  EAV TT + +NRSP+ A D KT
Sbjct: 621 VPHTP-QQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKT 679

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P +V SG P+NYS LRVFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 680 PIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 733



 Score = 76.6 bits (187), Expect(2) = 3e-40
 Identities = 32/62 (51%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F+ FKEWK +VE Q ++K+K LR DNG+EFCS+ F ++CK  GI  H ++ 
Sbjct: 563 YFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVP 622

Query: 182 HT 187
           HT
Sbjct: 623 HT 624


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  115 bits (289), Expect(2) = 3e-40
 Identities = 58/114 (50%), Positives = 78/114 (68%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++N+ ++ K+ CML  A + K F  EAV TT + +NRSP+ A D KT
Sbjct: 621 VPHTP-QQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKT 679

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P +V SG P+NYS LRVFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 680 PIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 733



 Score = 76.6 bits (187), Expect(2) = 3e-40
 Identities = 32/62 (51%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F+ FKEWK +VE Q ++K+K LR DNG+EFCS+ F ++CK  GI  H ++ 
Sbjct: 563 YFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVP 622

Query: 182 HT 187
           HT
Sbjct: 623 HT 624


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  114 bits (285), Expect(2) = 4e-40
 Identities = 59/114 (51%), Positives = 77/114 (67%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++N T++ K+ CML  A + K F  EAV T  + +NRSP+ AID KT
Sbjct: 547 VPHTP-QQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKT 605

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P KV SG P+NYS LRVFGC  Y +V+  KL+ R+ K +F+GY  G+K YK  C
Sbjct: 606 PIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWC 659



 Score = 77.4 bits (189), Expect(2) = 4e-40
 Identities = 32/62 (51%), Positives = 45/62 (72%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F+ FKEWK +VE Q ++K+K LR DNG++FCS+ F ++CK  GI RH ++ 
Sbjct: 489 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVP 548

Query: 182 HT 187
           HT
Sbjct: 549 HT 550


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  117 bits (293), Expect(2) = 8e-40
 Identities = 61/119 (51%), Positives = 81/119 (68%)
 Frame = +3

Query: 159 SQDIIVSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSA 338
           S+ I+   TP + NGVAE++N T++ K+ CML  A + K F   AV TT + +NRSP+ A
Sbjct: 409 SEGIVRHYTP-QQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYA 467

Query: 339 IDFKTPNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           ID KTP KV SG P+NYS LRVFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 468 IDKKTPIKVWSGFPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWC 526



 Score = 73.6 bits (179), Expect(2) = 8e-40
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRH 169
           +FLK K   F+ FKEWK +VE Q ++K+K LR DNG+EFCS+ F ++CK  GI RH
Sbjct: 360 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRH 415


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  117 bits (293), Expect(2) = 8e-40
 Identities = 61/119 (51%), Positives = 81/119 (68%)
 Frame = +3

Query: 159 SQDIIVSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSA 338
           S+ I+   TP + NGVAE++N T++ K+ CML  A + K F   AV TT + +NRSP+ A
Sbjct: 409 SEGIVRHYTP-QQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYA 467

Query: 339 IDFKTPNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           ID KTP KV SG P+NYS LRVFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 468 IDKKTPIKVWSGFPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWC 526



 Score = 73.6 bits (179), Expect(2) = 8e-40
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRH 169
           +FLK K   F+ FKEWK +VE Q ++K+K LR DNG+EFCS+ F ++CK  GI RH
Sbjct: 360 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRH 415


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  111 bits (278), Expect(2) = 1e-39
 Identities = 55/114 (48%), Positives = 77/114 (67%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           VS TP + NGV E++N T++ K+ CML  A + + F  EA  T  + +NRSP+ AID KT
Sbjct: 525 VSHTP-QQNGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTACYLINRSPSYAIDKKT 583

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P ++ SG P+NYS L+VFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 584 PIEMWSGSPANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKAYKLWC 637



 Score = 79.0 bits (193), Expect(2) = 1e-39
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K + F  FKEWK +VE Q ++K+K LR DNG+EFCSR F ++C+  GI RH ++ 
Sbjct: 467 YFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGIVRHYTVS 526

Query: 182 HT 187
           HT
Sbjct: 527 HT 528


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  105 bits (263), Expect(2) = 1e-38
 Identities = 49/105 (46%), Positives = 74/105 (70%)
 Frame = +3

Query: 192 EHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKTPNKV*S 371
           + NGVAE++N T++ ++ CML  A+++K F  EA  T  + +NRSP+  ++ KTP +V S
Sbjct: 583 QQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWS 642

Query: 372 GEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYK 506
           G P++YS L+VFGC  Y +V+ GKL+ R+ K LF+GY  G+K YK
Sbjct: 643 GTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYK 687



 Score = 81.3 bits (199), Expect(2) = 1e-38
 Identities = 34/62 (54%), Positives = 46/62 (74%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K D F AFK WK+++E Q ++K+K LR DNG EFCS  FN++C+  GI RH++I 
Sbjct: 520 YFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIP 579

Query: 182 HT 187
           HT
Sbjct: 580 HT 581


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  105 bits (263), Expect(2) = 1e-38
 Identities = 49/105 (46%), Positives = 74/105 (70%)
 Frame = +3

Query: 192 EHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKTPNKV*S 371
           + NGVAE++N T++ ++ CML  A+++K F  EA  T  + +NRSP+  ++ KTP +V S
Sbjct: 583 QQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWS 642

Query: 372 GEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYK 506
           G P++YS L+VFGC  Y +V+ GKL+ R+ K LF+GY  G+K YK
Sbjct: 643 GTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYK 687



 Score = 81.3 bits (199), Expect(2) = 1e-38
 Identities = 34/62 (54%), Positives = 46/62 (74%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K D F AFK WK+++E Q ++K+K LR DNG EFCS  FN++C+  GI RH++I 
Sbjct: 520 YFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIP 579

Query: 182 HT 187
           HT
Sbjct: 580 HT 581


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  105 bits (262), Expect(2) = 1e-38
 Identities = 49/105 (46%), Positives = 74/105 (70%)
 Frame = +3

Query: 192 EHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKTPNKV*S 371
           + NGVAE++N T++ ++ CML  A+++K F  EA  T  + +NRSP+  ++ KTP +V S
Sbjct: 583 QQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWS 642

Query: 372 GEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYK 506
           G P++YS L+VFGC  Y +V+ GKL+ R+ K LF+GY  G+K YK
Sbjct: 643 GMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYK 687



 Score = 81.3 bits (199), Expect(2) = 1e-38
 Identities = 34/62 (54%), Positives = 46/62 (74%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K D F AFK WK+++E Q ++K+K LR DNG EFCS  FN++C+  GI RH++I 
Sbjct: 520 YFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIP 579

Query: 182 HT 187
           HT
Sbjct: 580 HT 581


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  105 bits (261), Expect(2) = 1e-38
 Identities = 47/105 (44%), Positives = 72/105 (68%)
 Frame = +3

Query: 192 EHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKTPNKV*S 371
           + NG+AE++N T+LE+  CML  + +SK+F  EA  T  H +NRSP+SA+ FKTP +  +
Sbjct: 549 QQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWT 608

Query: 372 GEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYK 506
           G+ ++Y +L+VFGC  Y +    KL+ R+ K +F+GY  G+K YK
Sbjct: 609 GKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYK 653



 Score = 81.6 bits (200), Expect(2) = 1e-38
 Identities = 36/62 (58%), Positives = 46/62 (74%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K + F  FKEWKILVE Q  +K+K LR DNGLEF S DFN+ C+  GI+RH ++R
Sbjct: 486 YFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVR 545

Query: 182 HT 187
           +T
Sbjct: 546 YT 547


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549746|gb|ABA92543.1|
           retrotransposon protein, putative, Ty1-copia subclass,
           expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score =  111 bits (278), Expect(2) = 1e-38
 Identities = 58/114 (50%), Positives = 76/114 (66%)
 Frame = +3

Query: 174 VSGTPLEHNGVAEKINITLLEKSHCMLLQAKISKMFCVEAVHTTSHTVNRSPTSAIDFKT 353
           V  TP + NGVAE++  T++ KS CML    + K F  EAV T  + +NRSP+ AID KT
Sbjct: 621 VPHTP-QQNGVAERMKRTIISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSYAIDKKT 679

Query: 354 PNKV*SGEPSNYSYLRVFGCPTYYYVNEGKLK*RSKKVLFVGYVDGIKTYKF*C 515
           P +V SG P+NYS LRVFGC  Y +V+ GKL+ R+ K +F+GY  G+K YK  C
Sbjct: 680 PIEVWSGSPANYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 733



 Score = 75.1 bits (183), Expect(2) = 1e-38
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   HFLKAKGDVFEAFKEWKILVENQIKQKIKYLRIDNGLEFCSRDFNNFCKVHGISRHNSIR 181
           +FLK K   F+ FKEWK +V+ Q ++K+K LR DNG+E CS+ F ++CK  GI RH ++ 
Sbjct: 563 YFLKHKYQAFDVFKEWKTMVKKQTERKVKILRTDNGMELCSKIFKSYCKCEGIVRHYTVP 622

Query: 182 HT 187
           HT
Sbjct: 623 HT 624