BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041682
         (589 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACW03697.1| RNA polymerase beta subunit [Plantago australis]        65   2e-16
gb|ACW03686.1| RNA polymerase beta subunit [Dieffenbachia sp. KR...    63   2e-16
gb|AEK48483.1| RNA polymerase beta' subunit (chloroplast) [Coloc...    63   3e-16
ref|YP_005097865.1| RNA polymerase beta' subunit (chloroplast) [...    63   3e-16
ref|YP_004769621.1| RNA polymerase beta (chloroplast) [Spirodela...    63   3e-16
ref|YP_001595499.1| RNA polymerase beta' subunit-1 [Lemna minor]...    63   3e-16
ref|YP_006665771.1| RNA polymerase beta (chloroplast) [Elodea ca...    63   3e-16
ref|YP_567067.1| RNA polymerase beta' subunit [Vitis vinifera] g...    63   3e-16
gb|ACW03695.1| RNA polymerase beta subunit [Petiveria alliacea]        63   3e-16
ref|YP_053146.1| RNA polymerase beta' subunit [Nymphaea alba] gi...    63   4e-16
ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia a...    63   4e-16
ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiell...    63   4e-16
sp|Q6EW57.2|RPOC1_NYMAL RecName: Full=DNA-directed RNA polymeras...    63   4e-16
ref|YP_009000167.1| RNA polymerase beta (chloroplast) [Silene pa...    63   4e-16
gb|AFB76999.1| DNA-directed RNA polymerase beta' chain, partial ...    63   4e-16
gb|AFB18558.1| RNA polymerase beta' subunit, partial [Pandanus u...    61   4e-16
ref|YP_008593102.1| DNA-directed RNA polymerase beta' subunit (c...    63   5e-16
ref|YP_008520130.1| DNA-directed RNA polymerase beta' subunit (c...    63   5e-16
ref|YP_008592748.1| DNA-directed RNA polymerase beta' subunit (c...    63   5e-16
gb|AFK81464.1| RNA polymerase beta [Camellia taliensis]                63   5e-16

>gb|ACW03697.1| RNA polymerase beta subunit [Plantago australis]
          Length = 233

 Score = 64.7 bits (156), Expect(2) = 2e-16
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR+TPGEL+        +AV+TLLDNGI GQPMR
Sbjct: 13  YRRVIYRNNTLTDLLTTSRFTPGELIMCQEKLVQEAVDTLLDNGIRGQPMR 63



 Score = 47.0 bits (110), Expect(2) = 2e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 81  EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPHEIAIELFQTFVIRGLIRQHLASNI 140

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 141 GVAKSQIREKEPIVWE-ILQEVMQGHPVLLN 170


>gb|ACW03686.1| RNA polymerase beta subunit [Dieffenbachia sp. KRJ-2009]
          Length = 247

 Score = 63.2 bits (152), Expect(2) = 2e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 20  YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 70



 Score = 48.1 bits (113), Expect(2) = 2e-16
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+ ++H+    
Sbjct: 88  EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIKQHVASNI 147

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 148 GIAKSQIREKEPIVWE-ILQEVMQGHPVLLN 177


>gb|AEK48483.1| RNA polymerase beta' subunit (chloroplast) [Colocasia esculenta]
          Length = 690

 Score = 63.2 bits (152), Expect(2) = 3e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 303 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 353



 Score = 47.8 bits (112), Expect(2) = 3e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 371 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNI 430

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 431 GIAKSKIREKEPIVWE-ILQEVMQGHPVLLN 460


>ref|YP_005097865.1| RNA polymerase beta' subunit (chloroplast) [Colocasia esculenta]
           gi|340536630|gb|AEK48397.1| RNA polymerase beta' subunit
           (chloroplast) [Colocasia esculenta]
          Length = 690

 Score = 63.2 bits (152), Expect(2) = 3e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 303 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 353



 Score = 47.8 bits (112), Expect(2) = 3e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 371 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNI 430

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 431 GIAKSKIREKEPIVWE-ILQEVMQGHPVLLN 460


>ref|YP_004769621.1| RNA polymerase beta (chloroplast) [Spirodela polyrhiza]
           gi|341834062|gb|AEK94333.1| RNA polymerase beta
           [Spirodela polyrhiza]
          Length = 690

 Score = 63.2 bits (152), Expect(2) = 3e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 303 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 353



 Score = 47.8 bits (112), Expect(2) = 3e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 371 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNI 430

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 431 GIAKSKIREKEPIVWE-ILQEVMQGHPVLLN 460


>ref|YP_001595499.1| RNA polymerase beta' subunit-1 [Lemna minor]
           gi|212288293|sp|A9L987.1|RPOC1_LEMMI RecName:
           Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
           gi|88696761|gb|ABD48486.1| RNA polymerase beta'
           subunit-1 [Lemna minor]
          Length = 690

 Score = 63.2 bits (152), Expect(2) = 3e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 303 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 353



 Score = 47.8 bits (112), Expect(2) = 3e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 371 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNI 430

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 431 GIAKSKIREKEPIVWE-ILQEVMQGHPVLLN 460


>ref|YP_006665771.1| RNA polymerase beta (chloroplast) [Elodea canadensis]
           gi|374094587|gb|AEY84643.1| RNA polymerase beta
           (chloroplast) [Elodea canadensis]
          Length = 688

 Score = 63.2 bits (152), Expect(2) = 3e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 302 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 352



 Score = 47.8 bits (112), Expect(2) = 3e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 370 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNI 429

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 430 GIAKSKIREKEPIVWE-ILQEVMQGHPVLLN 459


>ref|YP_567067.1| RNA polymerase beta' subunit [Vitis vinifera]
           gi|122242806|sp|Q0ZJ29.1|RPOC1_VITVI RecName:
           Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
           gi|91701641|gb|ABE47525.1| RNA polymerase beta [Vitis
           vinifera] gi|550533639|dbj|BAO01483.1| RNA polymerase
           beta' subunit (chloroplast) [Vitis vinifera subsp.
           caucasica] gi|550533725|dbj|BAO01567.1| RNA polymerase
           beta' subunit (chloroplast) [Vitis vinifera subsp.
           caucasica] gi|550533810|dbj|BAO01651.1| RNA polymerase
           beta' subunit (chloroplast) [Vitis vinifera subsp.
           caucasica]
          Length = 682

 Score = 63.2 bits (152), Expect(2) = 3e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 296 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 346



 Score = 47.8 bits (112), Expect(2) = 3e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 364 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFLIRGLIRQHLASNI 423

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 424 GVAKSQIREKEPIVWE-ILQEVMRGHPVLLN 453


>gb|ACW03695.1| RNA polymerase beta subunit [Petiveria alliacea]
          Length = 247

 Score = 63.2 bits (152), Expect(2) = 3e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 20  YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 70



 Score = 47.8 bits (112), Expect(2) = 3e-16
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+ ++H+    
Sbjct: 88  EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIKQHLASNI 147

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 148 GVAKSKIREKEPIVW-KILQEVIQGHPVLLN 177


>ref|YP_053146.1| RNA polymerase beta' subunit [Nymphaea alba]
           gi|50250318|emb|CAF28584.1| RNA polymerase beta'
           subunit-1 [Nymphaea alba]
          Length = 691

 Score = 63.2 bits (152), Expect(2) = 4e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 303 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 353



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 371 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHLASNI 430

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 431 GLAKSKIREKEPIVWE-ILQEVMQGHPVLLN 460


>ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
           gi|341834230|gb|AEK94499.1| RNA polymerase beta [Wolffia
           australiana]
          Length = 690

 Score = 63.2 bits (152), Expect(2) = 4e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 303 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 353



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 371 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNI 430

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 431 GIAKSKIREKDPIVWE-ILQEVMQGHPVLLN 460


>ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
           gi|341834146|gb|AEK94416.1| RNA polymerase beta
           [Wolffiella lingulata]
          Length = 690

 Score = 63.2 bits (152), Expect(2) = 4e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 303 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 353



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 371 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHVASNI 430

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 431 GIAKSKIREKDPIVWE-ILQEVMQGHPVLLN 460


>sp|Q6EW57.2|RPOC1_NYMAL RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
          Length = 684

 Score = 63.2 bits (152), Expect(2) = 4e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 296 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 346



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 364 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHLASNI 423

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 424 GLAKSKIREKEPIVWE-ILQEVMQGHPVLLN 453


>ref|YP_009000167.1| RNA polymerase beta (chloroplast) [Silene paradoxa]
           gi|555944256|gb|AGZ18157.1| RNA polymerase beta
           (chloroplast) [Silene paradoxa]
          Length = 680

 Score = 63.2 bits (152), Expect(2) = 4e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 296 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 346



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ       ++ L +    +G+  +H+    
Sbjct: 364 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIELFQTFIIRGLIRQHLASNI 423

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H I  N
Sbjct: 424 GVAKSKIREKEPIIW-KILQEVMQGHPILLN 453


>gb|AFB76999.1| DNA-directed RNA polymerase beta' chain, partial (chloroplast)
           [Anredera baselloides]
          Length = 668

 Score = 63.2 bits (152), Expect(2) = 4e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 287 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 337



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLH+       ++ L + L  +G+  +H+    
Sbjct: 355 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTLVIRGLIRQHLASNI 414

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 415 GVAKSKIREKEPIVW-KILQEVMQGHPVLLN 444


>gb|AFB18558.1| RNA polymerase beta' subunit, partial [Pandanus utilis]
          Length = 520

 Score = 61.2 bits (147), Expect(2) = 4e-16
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLL  SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 273 YRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 323



 Score = 49.3 bits (116), Expect(2) = 4e-16
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLHQ+      ++ L +    +G+  +H+    
Sbjct: 341 EGRFRETLLGKRVGYSGRSVIVVGPSLSLHQYGLPREIAIELFQTFLIRGLIRQHLASNI 400

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W  +LQ +++ H +  N
Sbjct: 401 GIAKSKIREKEPIVWE-ILQEIMQGHPVLLN 430


>ref|YP_008593102.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
           yunnanensis] gi|537362855|gb|AGU44658.1| DNA-directed
           RNA polymerase beta' subunit (chloroplast) [Camellia
           yunnanensis]
          Length = 686

 Score = 63.2 bits (152), Expect(2) = 5e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 300 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 350



 Score = 47.0 bits (110), Expect(2) = 5e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLH+       ++ L +    +G+  +H+    
Sbjct: 368 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNI 427

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W M LQ +++ H +  N
Sbjct: 428 GVAKSKIREKEPIVWEM-LQEVMQGHPVLLN 457


>ref|YP_008520130.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
           taliensis] gi|537362675|gb|AGU44480.1| DNA-directed RNA
           polymerase beta' subunit (chloroplast) [Camellia
           taliensis] gi|537362945|gb|AGU44747.1| DNA-directed RNA
           polymerase beta' subunit (chloroplast) [Camellia
           taliensis]
          Length = 686

 Score = 63.2 bits (152), Expect(2) = 5e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 300 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 350



 Score = 47.0 bits (110), Expect(2) = 5e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLH+       ++ L +    +G+  +H+    
Sbjct: 368 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNI 427

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W M LQ +++ H +  N
Sbjct: 428 GVAKSKIREKEPIVWEM-LQEVMQGHPVLLN 457


>ref|YP_008592748.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
           cuspidata] gi|537362407|gb|AGU44215.1| DNA-directed RNA
           polymerase beta' subunit (chloroplast) [Camellia
           cuspidata]
          Length = 686

 Score = 63.2 bits (152), Expect(2) = 5e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 300 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 350



 Score = 47.0 bits (110), Expect(2) = 5e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLH+       ++ L +    +G+  +H+    
Sbjct: 368 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNI 427

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W M LQ +++ H +  N
Sbjct: 428 GVAKSQIREKEPIVWEM-LQEVMQGHPVLLN 457


>gb|AFK81464.1| RNA polymerase beta [Camellia taliensis]
          Length = 683

 Score = 63.2 bits (152), Expect(2) = 5e-16
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 8/51 (15%)
 Frame = +1

Query: 184 YRRVSYQINTLTDLLTISRYTPGELV--------QAVETLLDNGI*GQPMR 312
           YRRV Y+ NTLTDLLT SR TPGELV        +AV+TLLDNGI GQPMR
Sbjct: 297 YRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMR 347



 Score = 47.0 bits (110), Expect(2) = 5e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 309 EEGFHETLLGEQVVYSRRSVIVVCPSLSLHQWLPELPTSLVLPRALHSQGI*EEHITGE- 485
           E  F ETLLG++V YS RSVIVV PSLSLH+       ++ L +    +G+  +H+    
Sbjct: 365 EGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNI 424

Query: 486 ---KILINQHVSIKWTMLLQPLLKLHKISQN 569
              K  I +   I W M LQ +++ H +  N
Sbjct: 425 GVAKSKIREKEPIVWEM-LQEVMQGHPVLLN 454