BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041666
         (859 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   130   1e-46
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   119   2e-40
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   125   7e-40
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   118   2e-39
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   113   6e-35
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   127   1e-30
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   103   1e-22
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   110   9e-22
ref|XP_002331075.1| predicted protein [Populus trichocarpa]           100   2e-21
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        92   8e-19
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    91   1e-18
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    89   2e-17
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    80   3e-17
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                83   3e-17
gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like p...    95   4e-17
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 82   7e-17
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    85   1e-16
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    80   4e-16
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    76   9e-16
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    82   2e-15

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  130 bits (327), Expect(3) = 1e-46
 Identities = 69/173 (39%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
 Frame = +3

Query: 138  RLQLIKSVLIAIQ-----IFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            RLQL+K++L ++Q     IF LPKK+I+ +ET CRKFLW G+V+   +A +AWD L  PK
Sbjct: 798  RLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPK 857

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAE-AQQASWII 479
            + GGLN+T++ +WN+  +LK L  +  K+DKLW++ V+AYYIK  +I     +   SWI+
Sbjct: 858  STGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWIL 917

Query: 480  RKILKAHKYLEKDGIIKDTFMQMPEYSIRVIYNKLRGEYPKTG*KKYYATTRA 638
            RKI ++ + L + G  +     M  +SI+  Y  L+ +Y     K+     +A
Sbjct: 918  RKIFESRELLTRTGGWEAVSNHM-NFSIKKTYKLLQEDYENVVWKRLICNNKA 969



 Score = 65.9 bits (159), Expect(3) = 1e-46
 Identities = 30/78 (38%), Positives = 46/78 (58%)
 Frame = +2

Query: 611  KEILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPENLLHLLFQCP 790
            K ++CNN+  P+  FI +LA+  RLAT ER+ +WN + SP C +C    E + HL F C 
Sbjct: 961  KRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFNCI 1020

Query: 791  VANLVLKKLLQWQKIQRQ 844
             +  +  K+L +  +Q Q
Sbjct: 1021 YSKEIWGKVLLYLNLQPQ 1038



 Score = 38.9 bits (89), Expect(3) = 1e-46
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +2

Query: 47  RYLGVPLSSKRRSIGQCQPLLDQMIDKITTQ 139
           RYLGVPL+SK+ +  QC+PL    IDKITT+
Sbjct: 758 RYLGVPLASKKLNFSQCKPL----IDKITTR 784


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  119 bits (297), Expect(3) = 2e-40
 Identities = 55/132 (41%), Positives = 85/132 (64%), Gaps = 6/132 (4%)
 Frame = +3

Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
           RLQL+ SV+ A+       F  PK ++Q+IE +CR FLW G  E  +++ +AW  +C P+
Sbjct: 181 RLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPR 240

Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA-SWII 479
           + GGLNI DI +WN+  ++K L NL  K+D LW++ + AYY+K +++   E +   SWI+
Sbjct: 241 SCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIM 300

Query: 480 RKILKAHKYLEK 515
           + ILK  + LEK
Sbjct: 301 KAILKQREDLEK 312



 Score = 63.2 bits (152), Expect(3) = 2e-40
 Identities = 34/89 (38%), Positives = 50/89 (56%)
 Frame = +2

Query: 590 GISKDWMKEILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPENLL 769
           G  K+W K +L  N   PR  FI +LA HGRL+TK+RL K+ +    +C  C +  E++ 
Sbjct: 338 GQRKEW-KNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFC-SEEESMN 395

Query: 770 HLLFQCPVANLVLKKLLQWQKIQRQVHSW 856
           HL F C  +  V  ++LQW +I+     W
Sbjct: 396 HLFFVCDNSKRVWMEVLQWVQIRHDPSDW 424



 Score = 32.0 bits (71), Expect(3) = 2e-40
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +2

Query: 47  RYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
           +YLGVP++SK+ S     PL+D+++ KI   T+
Sbjct: 141 KYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTA 173


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  125 bits (315), Expect(3) = 7e-40
 Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 6/155 (3%)
 Frame = +3

Query: 138  RLQLIKSVLIAIQ-----IFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            RLQLIKS+L ++Q     IF L KK+IQ +E VCRKFLW G  E  K+A +AW T+  PK
Sbjct: 795  RLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPK 854

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAE-AQQASWII 479
            + GG N+ ++  WNR  +LK L  +  K+DKLW++ +H+YYIK  DI     + Q +WI+
Sbjct: 855  SRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWIL 914

Query: 480  RKILKAHKYLEKDGIIKDTFMQMPEYSIRVIYNKL 584
            RKI+KA  +L   G   D      ++S++  Y K+
Sbjct: 915  RKIVKARDHLSNIG-DWDEICIGDKFSMKKAYKKI 948



 Score = 50.1 bits (118), Expect(3) = 7e-40
 Identities = 24/78 (30%), Positives = 38/78 (48%)
 Frame = +2

Query: 584  EGGISKDWMKEILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPEN 763
            E G    W + ++CNN   P+  FI ++ +H RL T +R+ +W +       LC    E 
Sbjct: 950  ENGERVRW-RRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRNDGET 1008

Query: 764  LLHLLFQCPVANLVLKKL 817
            + HL F C  +  V  K+
Sbjct: 1009 IQHLFFSCSYSAGVWSKI 1026



 Score = 36.2 bits (82), Expect(3) = 7e-40
 Identities = 14/30 (46%), Positives = 23/30 (76%)
 Frame = +2

Query: 47  RYLGVPLSSKRRSIGQCQPLLDQMIDKITT 136
           RYLGVPL+SK+ +  QC+PL++ + ++  T
Sbjct: 755 RYLGVPLTSKKLTYAQCKPLVEMITNRAQT 784


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  118 bits (295), Expect(3) = 2e-39
 Identities = 54/130 (41%), Positives = 84/130 (64%), Gaps = 6/130 (4%)
 Frame = +3

Query: 138  RLQLIKSVLIA-----IQIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            R+QLI+SV+ A     +Q   LPK +I +I  +CR FLW+G+    +++ IAW+ +C PK
Sbjct: 623  RVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPK 682

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA-SWII 479
              GGLNI ++ +WN++ +LK L N+C K D LWI+ +H YYI+G  IW    +++ SWI+
Sbjct: 683  INGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIM 742

Query: 480  RKILKAHKYL 509
              ++K    L
Sbjct: 743  SSMMKLRPLL 752



 Score = 57.4 bits (137), Expect(3) = 2e-39
 Identities = 29/82 (35%), Positives = 45/82 (54%)
 Frame = +2

Query: 611  KEILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPENLLHLLFQCP 790
            + ++CNN   PR +F  + A H RLA+K+RLIK+ +N    C+ C +S E+  HL F C 
Sbjct: 782  RTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANCAFC-SSMESHEHLFFGCI 840

Query: 791  VANLVLKKLLQWQKIQRQVHSW 856
                +   +L W +I     +W
Sbjct: 841  ELKTIWTAVLNWLQIIHMPSTW 862



 Score = 35.4 bits (80), Expect(3) = 2e-39
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = +2

Query: 47  RYLGVPLSSKRRSIGQCQPLLDQMIDKIT 133
           RYLG+PLSSK+ +I   Q L+D+++ +IT
Sbjct: 583 RYLGIPLSSKKLNIKHYQVLIDKIVGRIT 611


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  113 bits (282), Expect(3) = 6e-35
 Identities = 51/155 (32%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
 Frame = +3

Query: 138  RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            R+Q++   + AI     Q   +P  +I++I+++CR F+W  S E  +++ IAW+++C PK
Sbjct: 623  RVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPK 682

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEA-EAQQASWII 479
              GGLNI ++ VWN + VL  L NLCKK D LW++ +HA+YIK + +         SW++
Sbjct: 683  GQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSWVL 742

Query: 480  RKILKAHKYLEKDGIIKDTFMQMPEYSIRVIYNKL 584
            + +L   +Y+     + D  +    + ++  Y+K+
Sbjct: 743  KNVLSQREYIHTLQPVWDELLNSERFKMKKAYDKM 777



 Score = 48.9 bits (115), Expect(3) = 6e-35
 Identities = 26/80 (32%), Positives = 39/80 (48%)
 Frame = +2

Query: 617  ILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPENLLHLLFQCPVA 796
            ++  N   PR +   +LA HGRL TK+RL+++ +      SLC+   E   H+LF C VA
Sbjct: 788  LMRKNCARPRAIHTTWLACHGRLGTKDRLVRFGMITDKIWSLCKEVEETQNHILFSCKVA 847

Query: 797  NLVLKKLLQWQKIQRQVHSW 856
              +   +L    I      W
Sbjct: 848  TDIWSNVLNRIGIDHVPQEW 867



 Score = 33.5 bits (75), Expect(3) = 6e-35
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
           +RYLGVPL+SK+ +I    PL+D++  +I   TS
Sbjct: 582 VRYLGVPLTSKKLNIKYYLPLIDKITTRIRHWTS 615


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  127 bits (320), Expect(2) = 1e-30
 Identities = 53/161 (32%), Positives = 106/161 (65%), Gaps = 6/161 (3%)
 Frame = +3

Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
           R+QL++S++ AI      +F +PKK+IQ+I+++CR F+W GS E  +++L+AW  +C P 
Sbjct: 284 RIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPA 343

Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQ-QASWII 479
             GGLN+ ++ +WN   +LK L N+C K+D LW++ +HAY++KG+++  A  +  ++WI+
Sbjct: 344 RCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWIL 403

Query: 480 RKILKAHKYLEKDGIIKDTFMQMPEYSIRVIYNKLRGEYPK 602
           + ++K    +    ++    ++  ++S++ +Y +L  ++ K
Sbjct: 404 KSVMKQRPQVNNLQLVWIEMLRKRKFSMKQVYMELVEDHNK 444



 Score = 33.1 bits (74), Expect(2) = 1e-30
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 17  TGVHHWYSTLRYLGVPLSSKRRSIGQCQPLLDQMIDKI 130
           TG       +RYLGVPLS K+ ++    PL+++++ KI
Sbjct: 234 TGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKI 271


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  103 bits (256), Expect(2) = 1e-22
 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
 Frame = +3

Query: 138  RLQLIKSVLIAIQIF-----VLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            RLQLI+SVL +IQ++     +LPKK+++ IE   R FLW G+        +AW  +C+PK
Sbjct: 632  RLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPK 691

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQ-ASWII 479
              GGL I D+  WN+ +++ H+ NL       W   V  Y +KGN  W A      SW  
Sbjct: 692  CEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNW 751

Query: 480  RKILK 494
            RK+LK
Sbjct: 752  RKLLK 756



 Score = 30.8 bits (68), Expect(2) = 1e-22
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQMIDKI 130
           +RYLG+PL + +  +  C PLLD++  +I
Sbjct: 591 VRYLGIPLITSKLRMQDCSPLLDRIETRI 619


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score =  110 bits (274), Expect = 9e-22
 Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 5/109 (4%)
 Frame = +3

Query: 138 RLQLIKSVLIAIQ-----IFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
           R QL+K+VL  +Q     +F++P KII+ IE +CR +LW G     K+ALIAWD +C PK
Sbjct: 603 RAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPK 662

Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWE 449
             GGL + ++ +WNR  V K   +L  K+DKLWI+ +HAYYIKG   W+
Sbjct: 663 YEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIKGQREWK 711


>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
          Length = 517

 Score =  100 bits (249), Expect(2) = 2e-21
 Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 14/143 (9%)
 Frame = +3

Query: 138 RLQLIKSVLIAIQI-----FVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
           R+QLI SVL +IQ+     F+LP ++I+ +E + + FLW GS      A +AWD +C+PK
Sbjct: 97  RVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPK 156

Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKD-KLWIQRVHAYYIKGNDIWEAEA-QQASWI 476
             GGL I  I  WN++ +LKH+ NLC   D  +W   + +  ++G + W  +  Q  SW 
Sbjct: 157 KEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWA 216

Query: 477 IRKILKAH-------KYLEKDGI 524
             KILK         KY+  DG+
Sbjct: 217 WGKILKLRSLAWPKMKYIIGDGM 239



 Score = 28.9 bits (63), Expect(2) = 2e-21
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQMIDKI 130
           ++YLGVPL S R     C+ L+D++  K+
Sbjct: 56  MKYLGVPLLSSRLKAIYCKGLVDRITSKV 84


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 92.4 bits (228), Expect(2) = 8e-19
 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
 Frame = +3

Query: 138  RLQLIKSVLIA-----IQIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            R+QLI SV+       +  F+LPK  I++IE++C +FLW G++E  K   ++W  LC+PK
Sbjct: 803  RIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPK 862

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA-SWII 479
            + GGL +  +  WN+ + ++ +  L   KD LW    H +++     W  E  Q+ SW  
Sbjct: 863  SEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTW 922

Query: 480  RKILK----AHKYL 509
            +++L     AH++L
Sbjct: 923  KRLLSLRPLAHQFL 936



 Score = 28.5 bits (62), Expect(2) = 8e-19
 Identities = 10/25 (40%), Positives = 20/25 (80%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQM 118
           +RYLG+PL +++  I + +PLL+++
Sbjct: 762 IRYLGLPLMNRKLRIAEYEPLLEKI 786


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 90.9 bits (224), Expect(2) = 1e-18
 Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
 Frame = +3

Query: 141 LQLIKSVLIAIQI-----FVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPKT 305
           LQL++ VL ++Q+     F+LP K+ + ++ + R +LW G  E    A +AWD +C+P  
Sbjct: 263 LQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFD 322

Query: 306 AGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA-SWIIR 482
            GGL I D   WN+   LK L  L  K   LW+  V AY +KG  +WE +A    SW  R
Sbjct: 323 EGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDAGAGRSWCFR 382

Query: 483 KILKAHKYLE 512
            IL+    L+
Sbjct: 383 AILRKRDILK 392



 Score = 29.6 bits (65), Expect(2) = 1e-18
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQMIDKI 130
           +RYLG+PL S+R     C PL+  +  +I
Sbjct: 221 IRYLGLPLLSRRLRSSDCDPLIQCITSRI 249


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 89.4 bits (220), Expect(2) = 2e-17
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
 Frame = +3

Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
           RL L+ SVL +I       F LP++ +++I+ +C  FLW G      +A IAW+T+C PK
Sbjct: 328 RLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPK 387

Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWE-AEAQQASWII 479
             GGL +  I   N V  LK +  +  + D LW+Q +  Y +K N  W    A Q SW+ 
Sbjct: 388 REGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMW 447

Query: 480 RKILK 494
           +K+LK
Sbjct: 448 KKLLK 452



 Score = 26.9 bits (58), Expect(2) = 2e-17
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
           +RYL +PL +KR +     PLL+Q+  +I T T+
Sbjct: 287 VRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTA 320


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 79.7 bits (195), Expect(2) = 3e-17
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
 Frame = +3

Query: 138  RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            RL LI SVL +I       F LP+K I+++E +C  FLW G+     +A I+W  +C PK
Sbjct: 810  RLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPK 869

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAE--AQQASWI 476
              GGL +  +   N V  LK +  +    + LW++ V  + ++    WE +    Q SWI
Sbjct: 870  DEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWI 929

Query: 477  IRKILK 494
             +K+LK
Sbjct: 930  WKKLLK 935



 Score = 35.8 bits (81), Expect(2) = 3e-17
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
           +RYLG+PL +KR S   C PLL+Q+  +I + TS
Sbjct: 769 VRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTS 802


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 83.2 bits (204), Expect(2) = 3e-17
 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
 Frame = +3

Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
           R  LIKSVL +I       F LP++ I++I+ +C  FLW GS     +A I+WD +C PK
Sbjct: 457 RFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPK 516

Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIW--EAEAQQASWI 476
             GGL + ++   N V  LK +  +    + LW + V  Y I+   IW  +      SWI
Sbjct: 517 AEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWI 576

Query: 477 IRKILK 494
            RKILK
Sbjct: 577 WRKILK 582



 Score = 32.3 bits (72), Expect(2) = 3e-17
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQT 142
           +RYLG+PL +KR +     PLL+Q+  +I T T
Sbjct: 416 VRYLGLPLVTKRLTSADYSPLLEQIKKRIATWT 448


>gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 120

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
 Frame = +3

Query: 138 RLQLIKSVLIAIQ-----IFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
           RLQLIKSVL  +Q     +FVLP+K+++ I+T CR FLW G     KRALIAW+ +C+PK
Sbjct: 39  RLQLIKSVLFGVQTYWSQVFVLPQKVLKLIQTACRVFLWTGKSGTSKRALIAWERICLPK 98

Query: 303 TAGGLNITDIFVWNRVVVLKHL 368
           TAGG N+ D+ VWN+  + K L
Sbjct: 99  TAGGWNVIDLKVWNQAAICKLL 120


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 82.0 bits (201), Expect(2) = 7e-17
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
 Frame = +3

Query: 138 RLQLIKSVLIAIQIFV-----LPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
           RL LI SV++++  F      LP   I++IE +C  FLW G    PK+A I W +LC  K
Sbjct: 383 RLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLK 442

Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA--SWI 476
             GGL I  +   N+V  LK +  L  ++  LW+  V  Y I+    W A  + +  SW+
Sbjct: 443 QEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWM 502

Query: 477 IRKILK 494
            +K+LK
Sbjct: 503 WKKLLK 508



 Score = 32.3 bits (72), Expect(2) = 7e-17
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +2

Query: 44  LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
           +RYLG+PL +K+ +     PLLD++  KI++ T+
Sbjct: 342 VRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTA 375


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 84.7 bits (208), Expect(2) = 1e-16
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
 Frame = +3

Query: 138  RLQLIKSVLIAIQIFV-----LPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            RL L+ SV+++I  F      LP   I++IE +C  FLW G V  PK+A IAW ++C PK
Sbjct: 1107 RLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPK 1166

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA--SWI 476
              GGL I  +   N+V  LK +  L   +  LW+  +  + I+    W A  + +  SW+
Sbjct: 1167 KEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWM 1226

Query: 477  IRKILK 494
             +K+LK
Sbjct: 1227 WKKLLK 1232



 Score = 28.9 bits (63), Expect(2) = 1e-16
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +2

Query: 44   LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
            +RYLG+PL +K+ +     PL++ +  KI++ T+
Sbjct: 1066 VRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTA 1099


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 80.1 bits (196), Expect(2) = 4e-16
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
 Frame = +3

Query: 138  RLQLIKSVLIAIQIFV-----LPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            RL LI SV++++  F      LP   I++IE +C  FLW G    PK+A I W +LC  K
Sbjct: 952  RLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLK 1011

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA--SWI 476
              GGL I  +   N+V  LK +  L  ++  LW+  V  Y I+    W A  + +  SW+
Sbjct: 1012 QEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWM 1071

Query: 477  IRKIL 491
             +K+L
Sbjct: 1072 WKKLL 1076



 Score = 31.6 bits (70), Expect(2) = 4e-16
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 44   LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
            +RYLG PL +K+ +     PLLD++  KI++ T+
Sbjct: 911  VRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTA 944


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 76.3 bits (186), Expect(2) = 9e-16
 Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
 Frame = +3

Query: 138  RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            RLQL+KSV+ +       +F+ P + +Q++E +C  FLW G+    + A I+W+ +C PK
Sbjct: 804  RLQLLKSVIYSTINFWASVFIFPNQCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSPK 863

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYI 428
             AGGL +  +  WNR++ LK +  L      LW+  V  + I
Sbjct: 864  EAGGLGLKRLSSWNRILALKLIWLLFTSAGSLWVSWVRLHLI 905



 Score = 34.3 bits (77), Expect(2) = 9e-16
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +2

Query: 20  GVHHWYSTLRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
           G+ H    +RYLGVPL S++      QPL+D++  + T+ T+
Sbjct: 755 GITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTA 796


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 81.6 bits (200), Expect(2) = 2e-15
 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
 Frame = +3

Query: 138  RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302
            RLQLIKSVL +I      +F LPK  +Q+IE +   FLW G     K+A IAW  +C  K
Sbjct: 957  RLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLK 1016

Query: 303  TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQ--ASWI 476
              GGL +  +   N V +LK +  +   +D LW++ V+ + I+    W  +      SW+
Sbjct: 1017 EEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWL 1076

Query: 477  IRKILK 494
             RKILK
Sbjct: 1077 WRKILK 1082



 Score = 28.1 bits (61), Expect(2) = 2e-15
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +2

Query: 44   LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145
            ++YLG+PL +KR +     PL++++  +IT+ T+
Sbjct: 916  VKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTN 949