BLASTX nr result
ID: Atropa21_contig00041666
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00041666 (859 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 130 1e-46 ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 119 2e-40 emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 125 7e-40 ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 118 2e-39 ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 113 6e-35 ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 127 1e-30 ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 103 1e-22 ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 110 9e-22 ref|XP_002331075.1| predicted protein [Populus trichocarpa] 100 2e-21 gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 92 8e-19 ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A... 91 1e-18 emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 89 2e-17 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 80 3e-17 gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 83 3e-17 gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like p... 95 4e-17 gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 82 7e-17 gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 85 1e-16 gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 80 4e-16 dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 76 9e-16 gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 82 2e-15 >emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1114 Score = 130 bits (327), Expect(3) = 1e-46 Identities = 69/173 (39%), Positives = 107/173 (61%), Gaps = 6/173 (3%) Frame = +3 Query: 138 RLQLIKSVLIAIQ-----IFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RLQL+K++L ++Q IF LPKK+I+ +ET CRKFLW G+V+ +A +AWD L PK Sbjct: 798 RLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPK 857 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAE-AQQASWII 479 + GGLN+T++ +WN+ +LK L + K+DKLW++ V+AYYIK +I + SWI+ Sbjct: 858 STGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWIL 917 Query: 480 RKILKAHKYLEKDGIIKDTFMQMPEYSIRVIYNKLRGEYPKTG*KKYYATTRA 638 RKI ++ + L + G + M +SI+ Y L+ +Y K+ +A Sbjct: 918 RKIFESRELLTRTGGWEAVSNHM-NFSIKKTYKLLQEDYENVVWKRLICNNKA 969 Score = 65.9 bits (159), Expect(3) = 1e-46 Identities = 30/78 (38%), Positives = 46/78 (58%) Frame = +2 Query: 611 KEILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPENLLHLLFQCP 790 K ++CNN+ P+ FI +LA+ RLAT ER+ +WN + SP C +C E + HL F C Sbjct: 961 KRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFNCI 1020 Query: 791 VANLVLKKLLQWQKIQRQ 844 + + K+L + +Q Q Sbjct: 1021 YSKEIWGKVLLYLNLQPQ 1038 Score = 38.9 bits (89), Expect(3) = 1e-46 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +2 Query: 47 RYLGVPLSSKRRSIGQCQPLLDQMIDKITTQ 139 RYLGVPL+SK+ + QC+PL IDKITT+ Sbjct: 758 RYLGVPLASKKLNFSQCKPL----IDKITTR 784 >ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max] Length = 506 Score = 119 bits (297), Expect(3) = 2e-40 Identities = 55/132 (41%), Positives = 85/132 (64%), Gaps = 6/132 (4%) Frame = +3 Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RLQL+ SV+ A+ F PK ++Q+IE +CR FLW G E +++ +AW +C P+ Sbjct: 181 RLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPR 240 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA-SWII 479 + GGLNI DI +WN+ ++K L NL K+D LW++ + AYY+K +++ E + SWI+ Sbjct: 241 SCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIM 300 Query: 480 RKILKAHKYLEK 515 + ILK + LEK Sbjct: 301 KAILKQREDLEK 312 Score = 63.2 bits (152), Expect(3) = 2e-40 Identities = 34/89 (38%), Positives = 50/89 (56%) Frame = +2 Query: 590 GISKDWMKEILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPENLL 769 G K+W K +L N PR FI +LA HGRL+TK+RL K+ + +C C + E++ Sbjct: 338 GQRKEW-KNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFC-SEEESMN 395 Query: 770 HLLFQCPVANLVLKKLLQWQKIQRQVHSW 856 HL F C + V ++LQW +I+ W Sbjct: 396 HLFFVCDNSKRVWMEVLQWVQIRHDPSDW 424 Score = 32.0 bits (71), Expect(3) = 2e-40 Identities = 14/33 (42%), Positives = 23/33 (69%) Frame = +2 Query: 47 RYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 +YLGVP++SK+ S PL+D+++ KI T+ Sbjct: 141 KYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTA 173 >emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1110 Score = 125 bits (315), Expect(3) = 7e-40 Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 6/155 (3%) Frame = +3 Query: 138 RLQLIKSVLIAIQ-----IFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RLQLIKS+L ++Q IF L KK+IQ +E VCRKFLW G E K+A +AW T+ PK Sbjct: 795 RLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPK 854 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAE-AQQASWII 479 + GG N+ ++ WNR +LK L + K+DKLW++ +H+YYIK DI + Q +WI+ Sbjct: 855 SRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWIL 914 Query: 480 RKILKAHKYLEKDGIIKDTFMQMPEYSIRVIYNKL 584 RKI+KA +L G D ++S++ Y K+ Sbjct: 915 RKIVKARDHLSNIG-DWDEICIGDKFSMKKAYKKI 948 Score = 50.1 bits (118), Expect(3) = 7e-40 Identities = 24/78 (30%), Positives = 38/78 (48%) Frame = +2 Query: 584 EGGISKDWMKEILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPEN 763 E G W + ++CNN P+ FI ++ +H RL T +R+ +W + LC E Sbjct: 950 ENGERVRW-RRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRNDGET 1008 Query: 764 LLHLLFQCPVANLVLKKL 817 + HL F C + V K+ Sbjct: 1009 IQHLFFSCSYSAGVWSKI 1026 Score = 36.2 bits (82), Expect(3) = 7e-40 Identities = 14/30 (46%), Positives = 23/30 (76%) Frame = +2 Query: 47 RYLGVPLSSKRRSIGQCQPLLDQMIDKITT 136 RYLGVPL+SK+ + QC+PL++ + ++ T Sbjct: 755 RYLGVPLTSKKLTYAQCKPLVEMITNRAQT 784 >ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max] Length = 939 Score = 118 bits (295), Expect(3) = 2e-39 Identities = 54/130 (41%), Positives = 84/130 (64%), Gaps = 6/130 (4%) Frame = +3 Query: 138 RLQLIKSVLIA-----IQIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 R+QLI+SV+ A +Q LPK +I +I +CR FLW+G+ +++ IAW+ +C PK Sbjct: 623 RVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPK 682 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA-SWII 479 GGLNI ++ +WN++ +LK L N+C K D LWI+ +H YYI+G IW +++ SWI+ Sbjct: 683 INGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIM 742 Query: 480 RKILKAHKYL 509 ++K L Sbjct: 743 SSMMKLRPLL 752 Score = 57.4 bits (137), Expect(3) = 2e-39 Identities = 29/82 (35%), Positives = 45/82 (54%) Frame = +2 Query: 611 KEILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPENLLHLLFQCP 790 + ++CNN PR +F + A H RLA+K+RLIK+ +N C+ C +S E+ HL F C Sbjct: 782 RTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANCAFC-SSMESHEHLFFGCI 840 Query: 791 VANLVLKKLLQWQKIQRQVHSW 856 + +L W +I +W Sbjct: 841 ELKTIWTAVLNWLQIIHMPSTW 862 Score = 35.4 bits (80), Expect(3) = 2e-39 Identities = 15/29 (51%), Positives = 23/29 (79%) Frame = +2 Query: 47 RYLGVPLSSKRRSIGQCQPLLDQMIDKIT 133 RYLG+PLSSK+ +I Q L+D+++ +IT Sbjct: 583 RYLGIPLSSKKLNIKHYQVLIDKIVGRIT 611 >ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max] Length = 947 Score = 113 bits (282), Expect(3) = 6e-35 Identities = 51/155 (32%), Positives = 91/155 (58%), Gaps = 6/155 (3%) Frame = +3 Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 R+Q++ + AI Q +P +I++I+++CR F+W S E +++ IAW+++C PK Sbjct: 623 RVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPK 682 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEA-EAQQASWII 479 GGLNI ++ VWN + VL L NLCKK D LW++ +HA+YIK + + SW++ Sbjct: 683 GQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSWVL 742 Query: 480 RKILKAHKYLEKDGIIKDTFMQMPEYSIRVIYNKL 584 + +L +Y+ + D + + ++ Y+K+ Sbjct: 743 KNVLSQREYIHTLQPVWDELLNSERFKMKKAYDKM 777 Score = 48.9 bits (115), Expect(3) = 6e-35 Identities = 26/80 (32%), Positives = 39/80 (48%) Frame = +2 Query: 617 ILCNNQGCPRWVFIHYLAIHGRLATKERLIKWNINFSPACSLCETSPENLLHLLFQCPVA 796 ++ N PR + +LA HGRL TK+RL+++ + SLC+ E H+LF C VA Sbjct: 788 LMRKNCARPRAIHTTWLACHGRLGTKDRLVRFGMITDKIWSLCKEVEETQNHILFSCKVA 847 Query: 797 NLVLKKLLQWQKIQRQVHSW 856 + +L I W Sbjct: 848 TDIWSNVLNRIGIDHVPQEW 867 Score = 33.5 bits (75), Expect(3) = 6e-35 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 +RYLGVPL+SK+ +I PL+D++ +I TS Sbjct: 582 VRYLGVPLTSKKLNIKYYLPLIDKITTRIRHWTS 615 >ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max] Length = 514 Score = 127 bits (320), Expect(2) = 1e-30 Identities = 53/161 (32%), Positives = 106/161 (65%), Gaps = 6/161 (3%) Frame = +3 Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 R+QL++S++ AI +F +PKK+IQ+I+++CR F+W GS E +++L+AW +C P Sbjct: 284 RIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPA 343 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQ-QASWII 479 GGLN+ ++ +WN +LK L N+C K+D LW++ +HAY++KG+++ A + ++WI+ Sbjct: 344 RCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWIL 403 Query: 480 RKILKAHKYLEKDGIIKDTFMQMPEYSIRVIYNKLRGEYPK 602 + ++K + ++ ++ ++S++ +Y +L ++ K Sbjct: 404 KSVMKQRPQVNNLQLVWIEMLRKRKFSMKQVYMELVEDHNK 444 Score = 33.1 bits (74), Expect(2) = 1e-30 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +2 Query: 17 TGVHHWYSTLRYLGVPLSSKRRSIGQCQPLLDQMIDKI 130 TG +RYLGVPLS K+ ++ PL+++++ KI Sbjct: 234 TGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKI 271 >ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca subsp. vesca] Length = 958 Score = 103 bits (256), Expect(2) = 1e-22 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 6/125 (4%) Frame = +3 Query: 138 RLQLIKSVLIAIQIF-----VLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RLQLI+SVL +IQ++ +LPKK+++ IE R FLW G+ +AW +C+PK Sbjct: 632 RLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPK 691 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQ-ASWII 479 GGL I D+ WN+ +++ H+ NL W V Y +KGN W A SW Sbjct: 692 CEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNW 751 Query: 480 RKILK 494 RK+LK Sbjct: 752 RKLLK 756 Score = 30.8 bits (68), Expect(2) = 1e-22 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKI 130 +RYLG+PL + + + C PLLD++ +I Sbjct: 591 VRYLGIPLITSKLRMQDCSPLLDRIETRI 619 >ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum lycopersicum] Length = 717 Score = 110 bits (274), Expect = 9e-22 Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 5/109 (4%) Frame = +3 Query: 138 RLQLIKSVLIAIQ-----IFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 R QL+K+VL +Q +F++P KII+ IE +CR +LW G K+ALIAWD +C PK Sbjct: 603 RAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPK 662 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWE 449 GGL + ++ +WNR V K +L K+DKLWI+ +HAYYIKG W+ Sbjct: 663 YEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIKGQREWK 711 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] Length = 517 Score = 100 bits (249), Expect(2) = 2e-21 Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 14/143 (9%) Frame = +3 Query: 138 RLQLIKSVLIAIQI-----FVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 R+QLI SVL +IQ+ F+LP ++I+ +E + + FLW GS A +AWD +C+PK Sbjct: 97 RVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPK 156 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKD-KLWIQRVHAYYIKGNDIWEAEA-QQASWI 476 GGL I I WN++ +LKH+ NLC D +W + + ++G + W + Q SW Sbjct: 157 KEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWA 216 Query: 477 IRKILKAH-------KYLEKDGI 524 KILK KY+ DG+ Sbjct: 217 WGKILKLRSLAWPKMKYIIGDGM 239 Score = 28.9 bits (63), Expect(2) = 2e-21 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKI 130 ++YLGVPL S R C+ L+D++ K+ Sbjct: 56 MKYLGVPLLSSRLKAIYCKGLVDRITSKV 84 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 92.4 bits (228), Expect(2) = 8e-19 Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 10/134 (7%) Frame = +3 Query: 138 RLQLIKSVLIA-----IQIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 R+QLI SV+ + F+LPK I++IE++C +FLW G++E K ++W LC+PK Sbjct: 803 RIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPK 862 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA-SWII 479 + GGL + + WN+ + ++ + L KD LW H +++ W E Q+ SW Sbjct: 863 SEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTW 922 Query: 480 RKILK----AHKYL 509 +++L AH++L Sbjct: 923 KRLLSLRPLAHQFL 936 Score = 28.5 bits (62), Expect(2) = 8e-19 Identities = 10/25 (40%), Positives = 20/25 (80%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQM 118 +RYLG+PL +++ I + +PLL+++ Sbjct: 762 IRYLGLPLMNRKLRIAEYEPLLEKI 786 >ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial [Cucumis sativus] Length = 647 Score = 90.9 bits (224), Expect(2) = 1e-18 Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 6/130 (4%) Frame = +3 Query: 141 LQLIKSVLIAIQI-----FVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPKT 305 LQL++ VL ++Q+ F+LP K+ + ++ + R +LW G E A +AWD +C+P Sbjct: 263 LQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFD 322 Query: 306 AGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA-SWIIR 482 GGL I D WN+ LK L L K LW+ V AY +KG +WE +A SW R Sbjct: 323 EGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDAGAGRSWCFR 382 Query: 483 KILKAHKYLE 512 IL+ L+ Sbjct: 383 AILRKRDILK 392 Score = 29.6 bits (65), Expect(2) = 1e-18 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKI 130 +RYLG+PL S+R C PL+ + +I Sbjct: 221 IRYLGLPLLSRRLRSSDCDPLIQCITSRI 249 >emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana] gi|7267919|emb|CAB78261.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 662 Score = 89.4 bits (220), Expect(2) = 2e-17 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 6/125 (4%) Frame = +3 Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RL L+ SVL +I F LP++ +++I+ +C FLW G +A IAW+T+C PK Sbjct: 328 RLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPK 387 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWE-AEAQQASWII 479 GGL + I N V LK + + + D LW+Q + Y +K N W A Q SW+ Sbjct: 388 REGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMW 447 Query: 480 RKILK 494 +K+LK Sbjct: 448 KKLLK 452 Score = 26.9 bits (58), Expect(2) = 2e-17 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 +RYL +PL +KR + PLL+Q+ +I T T+ Sbjct: 287 VRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTA 320 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 79.7 bits (195), Expect(2) = 3e-17 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 7/126 (5%) Frame = +3 Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RL LI SVL +I F LP+K I+++E +C FLW G+ +A I+W +C PK Sbjct: 810 RLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPK 869 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAE--AQQASWI 476 GGL + + N V LK + + + LW++ V + ++ WE + Q SWI Sbjct: 870 DEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWI 929 Query: 477 IRKILK 494 +K+LK Sbjct: 930 WKKLLK 935 Score = 35.8 bits (81), Expect(2) = 3e-17 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 +RYLG+PL +KR S C PLL+Q+ +I + TS Sbjct: 769 VRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTS 802 >gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] Length = 872 Score = 83.2 bits (204), Expect(2) = 3e-17 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 7/126 (5%) Frame = +3 Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 R LIKSVL +I F LP++ I++I+ +C FLW GS +A I+WD +C PK Sbjct: 457 RFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPK 516 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIW--EAEAQQASWI 476 GGL + ++ N V LK + + + LW + V Y I+ IW + SWI Sbjct: 517 AEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWI 576 Query: 477 IRKILK 494 RKILK Sbjct: 577 WRKILK 582 Score = 32.3 bits (72), Expect(2) = 3e-17 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQT 142 +RYLG+PL +KR + PLL+Q+ +I T T Sbjct: 416 VRYLGLPLVTKRLTSADYSPLLEQIKKRIATWT 448 >gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like protein, related [Medicago truncatula] Length = 120 Score = 94.7 bits (234), Expect = 4e-17 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 5/82 (6%) Frame = +3 Query: 138 RLQLIKSVLIAIQ-----IFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RLQLIKSVL +Q +FVLP+K+++ I+T CR FLW G KRALIAW+ +C+PK Sbjct: 39 RLQLIKSVLFGVQTYWSQVFVLPQKVLKLIQTACRVFLWTGKSGTSKRALIAWERICLPK 98 Query: 303 TAGGLNITDIFVWNRVVVLKHL 368 TAGG N+ D+ VWN+ + K L Sbjct: 99 TAGGWNVIDLKVWNQAAICKLL 120 >gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] Length = 740 Score = 82.0 bits (201), Expect(2) = 7e-17 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 7/126 (5%) Frame = +3 Query: 138 RLQLIKSVLIAIQIFV-----LPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RL LI SV++++ F LP I++IE +C FLW G PK+A I W +LC K Sbjct: 383 RLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLK 442 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA--SWI 476 GGL I + N+V LK + L ++ LW+ V Y I+ W A + + SW+ Sbjct: 443 QEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWM 502 Query: 477 IRKILK 494 +K+LK Sbjct: 503 WKKLLK 508 Score = 32.3 bits (72), Expect(2) = 7e-17 Identities = 14/34 (41%), Positives = 24/34 (70%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 +RYLG+PL +K+ + PLLD++ KI++ T+ Sbjct: 342 VRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTA 375 >gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1529 Score = 84.7 bits (208), Expect(2) = 1e-16 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 7/126 (5%) Frame = +3 Query: 138 RLQLIKSVLIAIQIFV-----LPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RL L+ SV+++I F LP I++IE +C FLW G V PK+A IAW ++C PK Sbjct: 1107 RLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPK 1166 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA--SWI 476 GGL I + N+V LK + L + LW+ + + I+ W A + + SW+ Sbjct: 1167 KEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWM 1226 Query: 477 IRKILK 494 +K+LK Sbjct: 1227 WKKLLK 1232 Score = 28.9 bits (63), Expect(2) = 1e-16 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 +RYLG+PL +K+ + PL++ + KI++ T+ Sbjct: 1066 VRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTA 1099 >gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1277 Score = 80.1 bits (196), Expect(2) = 4e-16 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 7/125 (5%) Frame = +3 Query: 138 RLQLIKSVLIAIQIFV-----LPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RL LI SV++++ F LP I++IE +C FLW G PK+A I W +LC K Sbjct: 952 RLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLK 1011 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQA--SWI 476 GGL I + N+V LK + L ++ LW+ V Y I+ W A + + SW+ Sbjct: 1012 QEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWM 1071 Query: 477 IRKIL 491 +K+L Sbjct: 1072 WKKLL 1076 Score = 31.6 bits (70), Expect(2) = 4e-16 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 +RYLG PL +K+ + PLLD++ KI++ T+ Sbjct: 911 VRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTA 944 >dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 910 Score = 76.3 bits (186), Expect(2) = 9e-16 Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 5/102 (4%) Frame = +3 Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RLQL+KSV+ + +F+ P + +Q++E +C FLW G+ + A I+W+ +C PK Sbjct: 804 RLQLLKSVIYSTINFWASVFIFPNQCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSPK 863 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYI 428 AGGL + + WNR++ LK + L LW+ V + I Sbjct: 864 EAGGLGLKRLSSWNRILALKLIWLLFTSAGSLWVSWVRLHLI 905 Score = 34.3 bits (77), Expect(2) = 9e-16 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +2 Query: 20 GVHHWYSTLRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 G+ H +RYLGVPL S++ QPL+D++ + T+ T+ Sbjct: 755 GITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTA 796 >gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1352 Score = 81.6 bits (200), Expect(2) = 2e-15 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 7/126 (5%) Frame = +3 Query: 138 RLQLIKSVLIAI-----QIFVLPKKIIQQIETVCRKFLWVGSVEPPKRALIAWDTLCMPK 302 RLQLIKSVL +I +F LPK +Q+IE + FLW G K+A IAW +C K Sbjct: 957 RLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLK 1016 Query: 303 TAGGLNITDIFVWNRVVVLKHL*NLCKKKDKLWIQRVHAYYIKGNDIWEAEAQQ--ASWI 476 GGL + + N V +LK + + +D LW++ V+ + I+ W + SW+ Sbjct: 1017 EEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWL 1076 Query: 477 IRKILK 494 RKILK Sbjct: 1077 WRKILK 1082 Score = 28.1 bits (61), Expect(2) = 2e-15 Identities = 12/34 (35%), Positives = 24/34 (70%) Frame = +2 Query: 44 LRYLGVPLSSKRRSIGQCQPLLDQMIDKITTQTS 145 ++YLG+PL +KR + PL++++ +IT+ T+ Sbjct: 916 VKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTN 949