BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041615
         (507 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   117   3e-33
emb|CAN82574.1| hypothetical protein VITISV_034720 [Vitis vinifera]   104   1e-31
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    109   4e-30
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   103   1e-27
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    98   3e-27
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]    98   3e-27
gb|ABR16307.1| unknown [Picea sitchensis]                              92   5e-27
emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera]    89   7e-27
emb|CAN74624.1| hypothetical protein VITISV_024822 [Vitis vinifera]    89   1e-26
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   122   5e-26
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         98   9e-26
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]            99   1e-25
emb|CAN62595.1| hypothetical protein VITISV_023519 [Vitis vinifera]   120   1e-25
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa...    99   3e-25
emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]    84   4e-25
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]       94   6e-25
emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera]   118   7e-25
emb|CAN78199.1| hypothetical protein VITISV_041785 [Vitis vinifera]   118   7e-25
emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]   117   1e-24
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...    87   1e-24

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  117 bits (292), Expect(2) = 3e-33
 Identities = 57/123 (46%), Positives = 77/123 (62%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           E ETG KLK LRS NGG+Y +++FE+Y S +  R E T+P TPQHNG+A+ MN       
Sbjct: 537 ERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKV 596

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                   L K F  E+V T   LINR PS  +A E+P ++WT+K+V  SHL+VF C ++
Sbjct: 597 RSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAF 656

Query: 14  VHM 6
            H+
Sbjct: 657 AHV 659



 Score = 50.4 bits (119), Expect(2) = 3e-33
 Identities = 20/45 (44%), Positives = 32/45 (71%)
 Frame = -1

Query: 504 QVPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           ++ S+ G++Y+VTFIDD  R LW+Y +K K +VF + +K  +L E
Sbjct: 493 EIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVE 537


>emb|CAN82574.1| hypothetical protein VITISV_034720 [Vitis vinifera]
          Length = 1172

 Score =  104 bits (260), Expect(2) = 1e-31
 Identities = 57/126 (45%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGG--KYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXX 201
           E ETG K+K LRS NG   KY +  F +Y +    R E TIP TPQ NG+A+ MN     
Sbjct: 528 ETETGLKVKCLRSDNGARRKYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNE 587

Query: 200 XXXXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCT 21
                    GL K F A++V+T   LINR PS  +   LP ++W+ K+VK SHL+VF C 
Sbjct: 588 RARSMRLHAGLPKTFWADAVSTAXYLINRXPSVXMEFRLPEEVWSGKEVKFSHLKVFGCV 647

Query: 20  SYVHMN 3
           SYVH++
Sbjct: 648 SYVHID 653



 Score = 57.8 bits (138), Expect(2) = 1e-31
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S+ GS+YY+TFIDD  R +W+YF+KNKS+VF   KK K++ E
Sbjct: 485 VASLGGSRYYITFIDDSXRKVWVYFLKNKSDVFVTXKKWKAMVE 528


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  109 bits (272), Expect(2) = 4e-30
 Identities = 52/123 (42%), Positives = 75/123 (60%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           E ETG K K LR+ NGG+Y +++FE+Y S +  R E T+P TPQHNG+A+ MN       
Sbjct: 538 ERETGRKRKRLRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVAERMNRTIVEKV 597

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                   L K F  E+V T   LINR PS  +  ++P ++WT+K++  SHL+VF C ++
Sbjct: 598 RSMLRMAKLPKTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMSYSHLKVFGCKAF 657

Query: 14  VHM 6
            H+
Sbjct: 658 AHV 660



 Score = 47.8 bits (112), Expect(2) = 4e-30
 Identities = 19/45 (42%), Positives = 31/45 (68%)
 Frame = -1

Query: 504 QVPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           ++ S+ G++Y+VTFIDD  R LW+Y  + K +VF + +K  +L E
Sbjct: 494 EIESMGGNKYFVTFIDDASRKLWVYIFRAKDQVFQVFQKFHALVE 538


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  103 bits (256), Expect(2) = 1e-27
 Identities = 49/124 (39%), Positives = 73/124 (58%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           EN+TG K+K LR+ NG ++C  +F+ +       R  T+ +TPQ NG+A+ MN       
Sbjct: 526 ENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERA 585

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                  GL +RF AE+V+T   LINRGP T I C+ P ++W+ K    S+L+ F CT+Y
Sbjct: 586 RCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAY 645

Query: 14  VHMN 3
            H++
Sbjct: 646 YHVS 649



 Score = 45.8 bits (107), Expect(2) = 1e-27
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = -1

Query: 504 QVPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           +V S+ G +++V+ IDD  RM W+Y MK+KSE F   K+ K L E
Sbjct: 482 RVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILME 526


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 98.2 bits (243), Expect(2) = 3e-27
 Identities = 48/124 (38%), Positives = 73/124 (58%)
 Frame = -2

Query: 374  ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
            E  TG  +K+LR+ NG ++CNK F+++  +    R  T+  TPQ NG+A+ MN       
Sbjct: 860  EKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRA 919

Query: 194  XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                   GL K+F AE+VNT A L+NR PST+I  + P ++W+ K    S L++F C +Y
Sbjct: 920  RCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAY 979

Query: 14   VHMN 3
             H++
Sbjct: 980  AHVS 983



 Score = 49.3 bits (116), Expect(2) = 3e-27
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S +G +YYVTFIDD  R +W+YF+K K EVF   K+ K++ E
Sbjct: 817 VESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVE 860


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score = 98.2 bits (243), Expect(2) = 3e-27
 Identities = 48/124 (38%), Positives = 73/124 (58%)
 Frame = -2

Query: 374  ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
            E  TG  +K+LR+ NG ++CNK F+++  +    R  T+  TPQ NG+A+ MN       
Sbjct: 647  EKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRA 706

Query: 194  XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                   GL K+F AE+VNT A L+NR PST+I  + P ++W+ K    S L++F C +Y
Sbjct: 707  RCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAY 766

Query: 14   VHMN 3
             H++
Sbjct: 767  AHVS 770



 Score = 49.3 bits (116), Expect(2) = 3e-27
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S +G +YYVTFIDD  R +W+YF+K K EVF   K+ K++ E
Sbjct: 604 VESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVE 647


>gb|ABR16307.1| unknown [Picea sitchensis]
          Length = 407

 Score = 91.7 bits (226), Expect(2) = 5e-27
 Identities = 43/123 (34%), Positives = 70/123 (56%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           E ++G  +K LR+ NG +Y NK+F+ Y   N  +RE T+P TPQ NG+A+  N       
Sbjct: 190 EKQSGKSIKILRTDNGKEYVNKEFDHYCKYNGIKREHTVPYTPQQNGVAERKNRTLMEMA 249

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                   +  +F AE++NT   ++NR P+ ++  + P + W+ +K  +SH +VF C  Y
Sbjct: 250 RCMLHARNMDPKFWAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKPTVSHFKVFGCDVY 309

Query: 14  VHM 6
           VH+
Sbjct: 310 VHI 312



 Score = 55.1 bits (131), Expect(2) = 5e-27
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = -1

Query: 498 PSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           PSI+GS+Y +TFIDD  R +W+YF+KNK EVF+  K+ K+  E
Sbjct: 148 PSISGSRYVLTFIDDYSRRIWVYFLKNKDEVFEKFKEFKAFVE 190


>emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera]
          Length = 1137

 Score = 88.6 bits (218), Expect(2) = 7e-27
 Identities = 44/91 (48%), Positives = 57/91 (62%)
 Frame = -2

Query: 275 RRELTIPSTPQHNGIAQCMNXXXXXXXXXXXXRVGLIKRFGAESVNTGA*LINRGPSTSI 96
           R E TIP TPQ NG+A+ MN              GL K F A++V+T A LINRGPS  +
Sbjct: 491 RMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPM 550

Query: 95  ACELPYKLWTSKKVKLSHLRVFCCTSYVHMN 3
              LP ++W+ K+VK SHL+VF C SYVH++
Sbjct: 551 EFRLPEEVWSGKEVKFSHLKVFGCVSYVHID 581



 Score = 57.8 bits (138), Expect(2) = 7e-27
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S+ GS+YY+TFIDD  R +W+YF+KNKS+VF   KK K++ E
Sbjct: 439 VASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVE 482


>emb|CAN74624.1| hypothetical protein VITISV_024822 [Vitis vinifera]
          Length = 1250

 Score = 88.6 bits (218), Expect(2) = 1e-26
 Identities = 44/91 (48%), Positives = 57/91 (62%)
 Frame = -2

Query: 275 RRELTIPSTPQHNGIAQCMNXXXXXXXXXXXXRVGLIKRFGAESVNTGA*LINRGPSTSI 96
           R E TIP TPQ NG+A+ MN              GL K F A++V+T A LINRGPS  +
Sbjct: 537 RMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPM 596

Query: 95  ACELPYKLWTSKKVKLSHLRVFCCTSYVHMN 3
              LP ++W+ K+VK SHL+VF C SYVH++
Sbjct: 597 EFRLPEEVWSGKEVKFSHLKVFGCVSYVHID 627



 Score = 56.6 bits (135), Expect(2) = 1e-26
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S+ GS+YY+TFIDD  R +W+YF+KNKS+VF   KK K + E
Sbjct: 485 VASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKVMVE 528


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  122 bits (306), Expect = 5e-26
 Identities = 64/141 (45%), Positives = 86/141 (60%), Gaps = 6/141 (4%)
 Frame = -2

Query: 407 YLTF*RNENR------YENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTP 246
           Y+TF  + +R       E ETG K+K LRS NGG+Y + +F +YY+    R E TIP TP
Sbjct: 265 YITFIDDSSRKKWKAMVETETGLKVKCLRSDNGGEYIDGEFSEYYAAQGIRMEKTIPRTP 324

Query: 245 QHNGIAQCMNXXXXXXXXXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWT 66
           Q NG+ + MN             VGL K F A++V+T A LINRGPS  +   LP ++W+
Sbjct: 325 QQNGVTERMNRTLNERARSMRLHVGLPKTFWADAVSTAAYLINRGPSVPMEFRLPKEVWS 384

Query: 65  SKKVKLSHLRVFCCTSYVHMN 3
            K+VK  HL+VFCC SYVH++
Sbjct: 385 GKEVKFLHLKVFCCISYVHID 405


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 97.8 bits (242), Expect(2) = 9e-26
 Identities = 49/124 (39%), Positives = 74/124 (59%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           EN++  KLK LR+ NG ++C+K FE+Y  ++  +R  T+  TPQ NG+A+ MN       
Sbjct: 538 ENQSDFKLKCLRTDNGLEFCSKVFEEYCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKT 597

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                   L + F AE+VNT + L+NR PS++I  + P +LW  K     +LRVF C +Y
Sbjct: 598 RCMLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGCPAY 657

Query: 14  VHMN 3
           +H+N
Sbjct: 658 LHIN 661



 Score = 44.7 bits (104), Expect(2) = 9e-26
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = -1

Query: 504 QVPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           QVPS++G +Y+++ IDD  R +WIY +K K +  +  K  KSL E
Sbjct: 494 QVPSLSGGRYFMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVE 538


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score = 98.6 bits (244), Expect(2) = 1e-25
 Identities = 51/124 (41%), Positives = 71/124 (57%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           E +T  K+K LR  NG ++C+K F+ Y       R  T+P TPQ NG+A+ MN       
Sbjct: 369 ERQTERKVKILRPDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKA 428

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                  GL K+F AE+V+T   LINR PS +I  + P ++W+S   K S LRVF CT+Y
Sbjct: 429 RCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSSSPAKYSDLRVFSCTAY 488

Query: 14  VHMN 3
            H++
Sbjct: 489 AHVD 492



 Score = 43.5 bits (101), Expect(2) = 1e-25
 Identities = 18/42 (42%), Positives = 29/42 (69%)
 Frame = -1

Query: 495 SINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           S  G++Y +T IDD  R +W YF+K+K + FD+ K+ K++ E
Sbjct: 328 SFGGARYMMTIIDDYSRKVWPYFLKHKYQAFDVFKEWKTMVE 369


>emb|CAN62595.1| hypothetical protein VITISV_023519 [Vitis vinifera]
          Length = 858

 Score =  120 bits (302), Expect = 1e-25
 Identities = 62/133 (46%), Positives = 83/133 (62%)
 Frame = -2

Query: 401 TF*RNENRYENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQC 222
           TF + +   E ETG K+K LRS NGG+Y ++ F +Y      R E TIP TPQ NG+A+ 
Sbjct: 236 TFKKWKTMVEIETGLKVKCLRSNNGGEYIDRGFSEYCVAQGIRMEKTIPGTPQQNGVAEH 295

Query: 221 MNXXXXXXXXXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSH 42
           MN             VGL K F  ++V+T A LINRGPS  +  +LP ++W+ K+VK SH
Sbjct: 296 MNRTLNERAGSMRLHVGLPKTFWVDAVSTAAYLINRGPSVPMEFKLPKEVWSDKEVKFSH 355

Query: 41  LRVFCCTSYVHMN 3
           L+VFCC SYVH++
Sbjct: 356 LKVFCCVSYVHID 368



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S+  S+YY+TFIDD  R +W+YF+KNKS VF+  KK K++ E
Sbjct: 202 VASLGDSRYYITFIDDSTRKVWVYFLKNKSNVFETFKKWKTMVE 245


>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
           gi|18542925|gb|AAL75759.1| Putative pol polyprotein
           [Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1005

 Score = 99.0 bits (245), Expect(2) = 3e-25
 Identities = 49/124 (39%), Positives = 70/124 (56%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           E +T  ++K LR+ NGG++C+  F+DYY +    R  TIP TPQ NG+A+ MN       
Sbjct: 278 ERQTEKEVKVLRTDNGGEFCSDAFDDYYRKEGIVRHYTIPYTPQQNGVAERMNRTIISKA 337

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                   + KRF AE+ NT   LINR PS  +  + P ++W+      S LRVF CT+Y
Sbjct: 338 HCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMSADYSQLRVFGCTAY 397

Query: 14  VHMN 3
            H++
Sbjct: 398 AHVD 401



 Score = 41.6 bits (96), Expect(2) = 3e-25
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = -1

Query: 498 PSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           PS+ G++Y +T IDD  R +W YF+K+K + F   K+ K + E
Sbjct: 236 PSLGGARYMLTIIDDHSRKVWPYFLKHKDDTFAAFKEWKVMIE 278


>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
          Length = 1236

 Score = 83.6 bits (205), Expect(2) = 4e-25
 Identities = 42/91 (46%), Positives = 55/91 (60%)
 Frame = -2

Query: 275 RRELTIPSTPQHNGIAQCMNXXXXXXXXXXXXRVGLIKRFGAESVNTGA*LINRGPSTSI 96
           R   TIP TPQ NG+A+ MN              GL K F A++V+T A LINRGPS  +
Sbjct: 537 RMXKTIPXTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTXAYLINRGPSVPM 596

Query: 95  ACELPYKLWTSKKVKLSHLRVFCCTSYVHMN 3
              L  ++W+ K+VK S L+VFCC SYVH++
Sbjct: 597 EFRLXEEVWSGKEVKFSXLKVFCCVSYVHID 627



 Score = 56.6 bits (135), Expect(2) = 4e-25
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S+ GS+YY+TFIDD  R +W+YF+KNK +VF   KK K++ E
Sbjct: 485 VASLGGSRYYITFIDDSSRKVWVYFLKNKXDVFXTFKKWKAMVE 528


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score = 94.4 bits (233), Expect(2) = 6e-25
 Identities = 50/122 (40%), Positives = 69/122 (56%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           E ++G KLK +R+ NGG+YC   F+ Y  Q+  R E T P TPQ NG+A+ MN       
Sbjct: 530 ERQSGKKLKCIRTDNGGEYCGP-FDAYCKQHGIRHEKTPPKTPQLNGLAERMNRTLIERV 588

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                +  L K F  E++ T   +IN  P+ ++  E+P K+W  K VK  HLRVF C +Y
Sbjct: 589 RCMLSKAKLPKHFWGEALYTAVHVINLSPAIALNAEVPDKVWFGKNVKYDHLRVFGCKAY 648

Query: 14  VH 9
           VH
Sbjct: 649 VH 650



 Score = 45.4 bits (106), Expect(2) = 6e-25
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -1

Query: 504 QVPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK 388
           +V S  G+ Y+VTFIDDC R LW+Y +K K +V    K+
Sbjct: 486 KVKSFTGTIYFVTFIDDCSRKLWVYALKTKDQVLAKFKE 524


>emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera]
          Length = 1299

 Score =  118 bits (296), Expect = 7e-25
 Identities = 61/135 (45%), Positives = 82/135 (60%)
 Frame = -2

Query: 407 YLTF*RNENRYENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIA 228
           ++TF + +   E ETG K+K LRS NGG+Y +  F +Y +    R E TIP TPQ NG+A
Sbjct: 517 FVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVA 576

Query: 227 QCMNXXXXXXXXXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKL 48
           + MN              GL K F A+ V+T   LINRGPS  +   LP ++W+ K+VK 
Sbjct: 577 ERMNRTLNERARSMRLHAGLPKTFWADVVSTTTYLINRGPSVPMEFRLPEEVWSGKEVKF 636

Query: 47  SHLRVFCCTSYVHMN 3
           SHL+VFCC SYVH++
Sbjct: 637 SHLKVFCCVSYVHID 651



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S+ GS+YY+TFIDD  R +W+YF+KNKS+VF   KK K++ E
Sbjct: 485 VASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVE 528


>emb|CAN78199.1| hypothetical protein VITISV_041785 [Vitis vinifera]
          Length = 892

 Score =  118 bits (296), Expect = 7e-25
 Identities = 60/124 (48%), Positives = 79/124 (63%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           E ETG K+K LRS NGG+Y +++F +Y +    R E TIP TPQ NG+A+ MN       
Sbjct: 351 ETETGLKVKCLRSDNGGEYIDRRFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERA 410

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                 VGL K F A++V+T A LINRGPS  +   LP ++W+ K VK SHL+VF C SY
Sbjct: 411 RSMRLHVGLPKTFWADAVSTTAYLINRGPSVPMEFRLPEEVWSDKNVKFSHLKVFGCVSY 470

Query: 14  VHMN 3
           VH++
Sbjct: 471 VHID 474


>emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]
          Length = 1246

 Score =  117 bits (294), Expect = 1e-24
 Identities = 61/135 (45%), Positives = 83/135 (61%)
 Frame = -2

Query: 407 YLTF*RNENRYENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIA 228
           ++TF + +   E ETG K+K LRS NGG+Y +  F +Y +    R E TIP TPQ NG+A
Sbjct: 489 FVTFKKWKXMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVA 548

Query: 227 QCMNXXXXXXXXXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKL 48
           + MN              GL K F A++V+T A LINRGPS  +   LP ++W+ K+VK 
Sbjct: 549 ERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKF 608

Query: 47  SHLRVFCCTSYVHMN 3
           SHL+VF C SYVH++
Sbjct: 609 SHLKVFGCVSYVHID 623



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = -1

Query: 501 VPSINGSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           V S+ GS+YY+TFIDD  R +W+YF+KNKS+VF   KK K + E
Sbjct: 457 VASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKXMVE 500


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
           gi|31429795|gb|AAP51797.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1350

 Score = 87.0 bits (214), Expect(2) = 1e-24
 Identities = 44/123 (35%), Positives = 66/123 (53%)
 Frame = -2

Query: 374 ENETGSKLKSLRSVNGGKYCNKKFEDYYSQNENRRELTIPSTPQHNGIAQCMNXXXXXXX 195
           EN++  K+K LRS  GG+Y +K+FE Y      RR+LT   + Q NG+A+  N       
Sbjct: 496 ENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMA 555

Query: 194 XXXXXRVGLIKRFGAESVNTGA*LINRGPSTSIACELPYKLWTSKKVKLSHLRVFCCTSY 15
                  G+ K F AE+VNT   ++NR P+ ++    P++ W  KK  + H+RVF C  Y
Sbjct: 556 NSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICY 615

Query: 14  VHM 6
             +
Sbjct: 616 AQV 618



 Score = 51.6 bits (122), Expect(2) = 1e-24
 Identities = 23/47 (48%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
 Frame = -1

Query: 504 QVPSIN--GSQYYVTFIDDCIRMLWIYFMKNKSEVFDILKK*KSL*E 370
           +VP+I+  G+ Y++TFIDD  RM+W+YF+K KS   +I KK K++ E
Sbjct: 450 KVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVE 496