BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041593
         (543 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
gb|EMJ07903.1| hypothetical protein PRUPE_ppa023974mg [Prunus pe...    61   2e-07
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...    58   1e-06
ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1476

 Score =  100 bits (248), Expect = 3e-19
 Identities = 51/56 (91%), Positives = 53/56 (94%)
 Frame = +3

Query: 3    FARLALLSNEKREKIIQADIEGRREKLAKLKSTAVTKRKNTKSFRMNKFARVSSTA 170
            FARLALLSNEKREK+IQADIEGRREKLAKLKSTAVTKR+NTKSFRMNKF RVS  A
Sbjct: 1420 FARLALLSNEKREKVIQADIEGRREKLAKLKSTAVTKRRNTKSFRMNKFVRVSGPA 1475


>ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1464

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/56 (87%), Positives = 53/56 (94%)
 Frame = +3

Query: 3    FARLALLSNEKREKIIQADIEGRREKLAKLKSTAVTKRKNTKSFRMNKFARVSSTA 170
            FARLALLSNEKREK+IQADIEGRREKLAKL+STAVTKR+NTK+FRMNKF RVS  A
Sbjct: 1408 FARLALLSNEKREKVIQADIEGRREKLAKLRSTAVTKRRNTKNFRMNKFVRVSGPA 1463


>gb|EMJ07903.1| hypothetical protein PRUPE_ppa023974mg [Prunus persica]
          Length = 1353

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3    FARLALLSNEKREKIIQADIEGRREKLAKLKSTAVTKR-KNTKSFRMNKFARVSSTAN 173
            FARLALLS+EKREK+IQ+DIEGR+EKL K+K     +R    K  R  K+ R S+ +N
Sbjct: 1284 FARLALLSDEKREKVIQSDIEGRKEKLEKMKENDNPRRVSRIKKLRKRKYVRPSTLSN 1341


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +3

Query: 3    FARLALLSNEKREKIIQADIEGRREKLAKLKSTAVTKRKN-TKSFRMNKFAR 155
            FA+LALLS++KR+K I ADIEGR+EKL KLKS    +RKN T   R  +F R
Sbjct: 1360 FAKLALLSDDKRQKAIHADIEGRKEKLEKLKSKVDLERKNKTNKLRRRRFIR 1411


>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1496

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +3

Query: 3    FARLALLSNEKREKIIQADIEGRREKLAKLKSTAVTKRKNTKSFRMNKFARV 158
            FARLALLS+EKRE++IQADIEGR+EKL K++     KR N    R+N+  ++
Sbjct: 1425 FARLALLSDEKRERVIQADIEGRKEKLEKMR-----KRGNVDPRRVNRIKKL 1471