BLASTX nr result
ID: Atropa21_contig00041557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00041557
(475 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 61 4e-14
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 54 8e-12
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 68 1e-09
ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein A... 67 2e-09
ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264... 65 9e-09
gb|ABI34321.1| RNase H family protein [Solanum demissum] 65 1e-08
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 64 3e-08
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A... 63 4e-08
ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein A... 63 5e-08
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 62 8e-08
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 61 2e-07
ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein A... 61 2e-07
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 60 3e-07
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 60 3e-07
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 59 9e-07
ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein A... 59 9e-07
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A... 59 9e-07
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 58 2e-06
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A... 56 4e-06
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 56 4e-06
>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
lycopersicum]
Length = 1531
Score = 60.8 bits (146), Expect(2) = 4e-14
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = -2
Query: 333 WSSSI*SFPQLYHLFALAQIL*HIGHFPIPKTTIVYWNKLEAEKFKLNTHGCFSI*EGKA 154
W SS LYHL A+ H + K +V W K + +KLNT G GK
Sbjct: 1428 WQSS------LYHLIKTAEHC-HQQY----KIIMVSWQKPKEGIYKLNTDGSAIQDTGKI 1476
Query: 153 GIGGILRDDKGDLVMAFSYPIKNSSNNYTNSK--WFGINQCAQNGFSSITLEI 1
G GGILRD G ++ AFS P+ +NN K +G+ C Q+G+ I LE+
Sbjct: 1477 GGGGILRDHTGKIIYAFSVPLDFGTNNMAELKAAAYGLEWCQQHGYKRIALEV 1529
Score = 42.4 bits (98), Expect(2) = 4e-14
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1
Query: 472 VHKLVLQIAPMIICWTIWKERCSCK 398
VHKL++QI P ICW +WK RC K
Sbjct: 1372 VHKLIMQILPNYICWNLWKNRCGVK 1396
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 53.9 bits (128), Expect(2) = 8e-12
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTN 64
K + WN+ + K+NT G I G G GGI+RD +G +V+AF+ P+ + +NN
Sbjct: 488 KVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGDGTNNKAE 547
Query: 63 SK--WFGINQCAQNGFSSITLEI 1
++ FG++ + G +I +E+
Sbjct: 548 AEAALFGLSWALELGHRNILIEL 570
Score = 41.6 bits (96), Expect(2) = 8e-12
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -1
Query: 469 HKLVLQIAPMIICWTIWKERCSCKLSMANKRNSISSCWSNKSVGTLEQQYLKLSPT---V 299
H+L+LQ P+ I W +WK RC+CK + KS +Y T +
Sbjct: 414 HQLLLQAMPIFIVWNLWKNRCACK-------------YGGKSTNISRVKYAIYKDTFKML 460
Query: 298 SSLCPCSNFVTHW 260
S PC N+ +W
Sbjct: 461 KSAFPCINWPGNW 473
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTN 64
K IV WNK + K+KLNT G GK G GGILRD++G ++ AFS P +NN+
Sbjct: 1271 KILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAE 1330
Query: 63 SK--WFGINQCAQNGFSSITLEI 1
K G++ C Q+G+ I LE+
Sbjct: 1331 IKAALHGLDWCEQHGYKKIELEV 1353
>ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = -2
Query: 252 PIPKTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNN 73
PI K T V W+ + K+NT G F G AGIGGI R+ G++VMAFS P+ +SNN
Sbjct: 22 PIQKLTQVKWSTPQIGTIKVNTDGSFLWEIGSAGIGGIARNSNGEMVMAFSIPVACTSNN 81
Query: 72 YTN--SKWFGINQCAQNGFSSITLEI 1
+ FG C+Q G ++ TLE+
Sbjct: 82 MAEALAAEFGGKWCSQQGLTNFTLEL 107
>ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264807 [Solanum
lycopersicum]
Length = 934
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYT- 67
K T+V WN+ + +KLNT G G+ G GGILRDD+ L+ FS P+ +NN+
Sbjct: 751 KVTLVRWNRPPSGIYKLNTDGSAIHNTGQTGGGGILRDDQDKLIYVFSIPLAFGTNNFAE 810
Query: 66 -NSKWFGINQCAQNGFSSITLEI 1
+ G+N C Q+GF I LE+
Sbjct: 811 IQAALHGLNWCQQHGFKRIILEV 833
>gb|ABI34321.1| RNase H family protein [Solanum demissum]
Length = 945
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = -2
Query: 252 PIPKTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNN 73
P PK IV+WN K+NT G FS G AG+G I+RD ++MAFS P SSNN
Sbjct: 738 PYPKWKIVHWNTPNINCVKINTDGSFS--SGNAGLGWIVRDHTRRMIMAFSIPSSCSSNN 795
Query: 72 YTN--SKWFGINQCAQNGFSSITLEI 1
+ FGI C Q GF + LE+
Sbjct: 796 LAEALAARFGILWCLQQGFHNCYLEL 821
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTN 64
K +V WNK +KLNT G GK G GGILRD +G +V AFS P +NN+
Sbjct: 532 KIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQGKIVYAFSIPFGVGTNNFAE 591
Query: 63 SK--WFGINQCAQNGFSSITLEI 1
K +G+ C Q+G+ + LE+
Sbjct: 592 IKAALYGMQWCEQHGYKKVELEV 614
>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 927
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTN 64
K +V W K + +KLNT+G GK G GG+LR +G L+ AFS P+ + N+
Sbjct: 751 KVNMVRWIKPKQHVYKLNTNGSALAESGKIGGGGVLRHHQGKLICAFSVPLGVGTYNFAE 810
Query: 63 SK--WFGINQCAQNGFSSITLEI 1
K FGI+ C Q+G+ SI LE+
Sbjct: 811 LKAATFGIDWCEQHGYKSIELEV 833
>ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = -2
Query: 234 IVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTNSK- 58
+V W K + +KLNT G GK G GG+LRD +G L+ AFS P +NN+ K
Sbjct: 1 MVRWIKPKQYIYKLNTDGSALADNGKIGGGGVLRDHQGKLIYAFSVPFGIGTNNFAELKA 60
Query: 57 -WFGINQCAQNGFSSITLEI 1
FGI C Q+G+ +I LE+
Sbjct: 61 ATFGIEWCEQHGYKNIELEV 80
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTN 64
K +V WNK +KLNT G GK G GGILRD +G +V AFS P +NN
Sbjct: 1078 KIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAE 1137
Query: 63 SK--WFGINQCAQNGFSSITLEI 1
K +G+ C Q+G+ + LE+
Sbjct: 1138 IKAALYGLEWCDQHGYKRVELEV 1160
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTN 64
K +V WNK +KLNT G GK G GG LRD +G +V AFS P +NN+
Sbjct: 1150 KIVLVSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAE 1209
Query: 63 SK--WFGINQCAQNGFSSITLEI 1
K +G+ C Q+G+ + LE+
Sbjct: 1210 IKAALYGMEWCEQHGYKKVELEV 1232
>ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = -2
Query: 234 IVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYT--NS 61
+V W K + K+NT G I EGK G GGI+RD +G L+MAFS P+ SNN +
Sbjct: 1 MVTWFKPPDQWIKINTDGSAIINEGKIGAGGIIRDKEGKLLMAFSTPLGEGSNNQAEIEA 60
Query: 60 KWFGINQCAQNGFSSITLEI 1
FG+ + GF +I LE+
Sbjct: 61 TLFGMTWALELGFKNILLEL 80
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTN 64
K T V W K FKLNT G K G GGILRD G L+ AF+ P +NN+
Sbjct: 827 KVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNGKLIYAFAIPFGIGTNNFAE 886
Query: 63 SK--WFGINQCAQNGFSSITLEI 1
K +G++ C Q+G+ I LE+
Sbjct: 887 MKAALYGLSWCEQHGYKRIILEV 909
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYT- 67
K T+V W + KLNT G GK G GGILRD +G L+ AF+ P+ +NN+
Sbjct: 206 KVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAE 265
Query: 66 -NSKWFGINQCAQNGFSSITLEI 1
+ G+ C Q+GF I LE+
Sbjct: 266 IQAALHGLQWCQQHGFEKIILEV 288
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = -2
Query: 231 VYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYT--NSK 58
V W K + K+NT G EGK G GGI+RD +G ++MAFS P+ SNN +
Sbjct: 289 VTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAA 348
Query: 57 WFGINQCAQNGFSSITLEI 1
FG+ + GF +I LE+
Sbjct: 349 LFGLTWAFELGFKNILLEL 367
>ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = -2
Query: 234 IVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYTNSK- 58
+V W K + +K+NT G G G GGI+RD +G+L+ AFS P +NN K
Sbjct: 1 MVSWRKPDDGIYKINTDGSALQESGNIGGGGIVRDHQGNLIYAFSLPFGLGTNNIAEIKA 60
Query: 57 -WFGINQCAQNGFSSITLEI 1
+G++ C Q+G+ SI LE+
Sbjct: 61 TLYGLDWCEQHGYKSIELEV 80
>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 213
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = -2
Query: 231 VYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYT--NSK 58
V W K + K+NT G EGK G GGI+RD +G ++MAFS P+ SNN +
Sbjct: 34 VAWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAA 93
Query: 57 WFGINQCAQNGFSSITLEI 1
FG+ + GF +I LE+
Sbjct: 94 LFGLTWAFELGFKNILLEL 112
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNNYT- 67
K +V W K + +KLNT G GK G GGILRD G L AFS P +NN
Sbjct: 772 KVIMVSWRKPQFGIYKLNTDGSALPESGKIGGGGILRDYTGKLHYAFSIPFGLGTNNIAE 831
Query: 66 -NSKWFGINQCAQNGFSSITLEI 1
+ +G++ C Q+G+ SI LE+
Sbjct: 832 MEAARYGLDWCEQHGYKSILLEV 854
>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNN--Y 70
K V WN+ E K+NT G GK G GGI+RD G L++AF+ + SNN
Sbjct: 125 KVCKVTWNRPPEEWIKINTDGSALTNPGKIGAGGIIRDKDGKLILAFATSLGEGSNNKAE 184
Query: 69 TNSKWFGINQCAQNGFSSITLEI 1
T + FG+ + + GF +I +E+
Sbjct: 185 TEAALFGLVKALELGFKNIIMEL 207
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = -2
Query: 243 KTTIVYWNKLEAEKFKLNTHGCFSI*EGKAGIGGILRDDKGDLVMAFSYPIKNSSNN--Y 70
K +V WN+ + K+NT G G+ G GGILRD +G +V+AF+ P+ SNN
Sbjct: 125 KVCMVAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNNKAE 184
Query: 69 TNSKWFGINQCAQNGFSSITLEI 1
T + FG++ + G+ +I +E+
Sbjct: 185 TAAALFGLSWALELGYRNILIEL 207