BLASTX nr result
ID: Atropa21_contig00040990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040990
(672 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006360369.1| PREDICTED: uncharacterized protein LOC102591... 93 9e-17
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra... 68 2e-09
ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II tra... 67 4e-09
ref|XP_006597111.1| PREDICTED: mediator of RNA polymerase II tra... 66 8e-09
ref|XP_006597110.1| PREDICTED: mediator of RNA polymerase II tra... 66 8e-09
ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853... 66 8e-09
ref|XP_003547623.1| PREDICTED: mediator of RNA polymerase II tra... 66 8e-09
emb|CBI40659.3| unnamed protein product [Vitis vinifera] 66 8e-09
gb|EOY25953.1| Uncharacterized protein TCM_027312 [Theobroma cacao] 66 1e-08
gb|EOY25958.1| Uncharacterized protein TCM_027316 [Theobroma cacao] 65 1e-08
tpg|DAA48539.1| TPA: hypothetical protein ZEAMMB73_618405 [Zea m... 65 2e-08
ref|XP_002332445.1| predicted protein [Populus trichocarpa] 64 3e-08
gb|ACG48955.1| hypothetical protein [Zea mays] gi|413921728|gb|A... 64 3e-08
ref|XP_006359328.1| PREDICTED: mediator of RNA polymerase II tra... 64 4e-08
ref|XP_006359327.1| PREDICTED: mediator of RNA polymerase II tra... 64 4e-08
ref|XP_006359326.1| PREDICTED: mediator of RNA polymerase II tra... 64 4e-08
ref|XP_002298205.2| hypothetical protein POPTR_0001s21210g [Popu... 64 4e-08
ref|XP_002303194.2| hypothetical protein POPTR_0003s01980g, part... 64 4e-08
ref|XP_004236821.1| PREDICTED: uncharacterized protein LOC101257... 64 4e-08
ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago ... 64 4e-08
>ref|XP_006360369.1| PREDICTED: uncharacterized protein LOC102591617 [Solanum tuberosum]
Length = 241
Score = 92.8 bits (229), Expect = 9e-17
Identities = 65/133 (48%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Frame = +1
Query: 283 QTDYLRKIRLKMLAF--ETKSLNPVCNETV-QVVDESSKLQCTQLDAKSPTEESTLHNLQ 453
+TDYLRKI LKML+ +TK VC+ETV QVVDE+SK+Q +AKSP LHNLQ
Sbjct: 137 KTDYLRKIALKMLSLTMKTKFQIHVCDETVLQVVDENSKVQ----NAKSP-----LHNLQ 187
Query: 454 SGEDGALLDPFQQRSITENGNLKRKGNFGPSGHDHTIFEVGNKQKMDKKLKRTWGIGGSI 633
SGE +GN Q+MDKKLK+ WGI GSI
Sbjct: 188 SGE------------------------------------LGNIQEMDKKLKKKWGIVGSI 211
Query: 634 SLEDLKQHFGKKR 672
SL+DLKQHFGKKR
Sbjct: 212 SLDDLKQHFGKKR 224
>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like, partial [Cucumis sativus]
Length = 589
Score = 68.2 bits (165), Expect = 2e-09
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV QEG+ ELRKIAVRFEEKIFT+A SQ
Sbjct: 30 RQRIVNKIMETLKRHLPVSGQEGLSELRKIAVRFEEKIFTAATSQ 74
>ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like [Cicer arietinum]
Length = 1313
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQR+ NKI+ TL RHLPV QEG+LELRKIA RFEEKIFT+A SQ
Sbjct: 30 RQRVVNKIMDTLKRHLPVSGQEGLLELRKIAQRFEEKIFTAATSQ 74
>ref|XP_006597111.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X3 [Glycine max]
Length = 1170
Score = 66.2 bits (160), Expect = 8e-09
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV VQEG+ EL+KIA RFEEKIFT+A SQ
Sbjct: 30 RQRIVNKIMDTLKRHLPVSVQEGLHELQKIAQRFEEKIFTAATSQ 74
>ref|XP_006597110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X2 [Glycine max]
Length = 1284
Score = 66.2 bits (160), Expect = 8e-09
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV VQEG+ EL+KIA RFEEKIFT+A SQ
Sbjct: 30 RQRIVNKIMDTLKRHLPVSVQEGLHELQKIAQRFEEKIFTAATSQ 74
>ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853144 [Vitis vinifera]
Length = 170
Score = 66.2 bits (160), Expect = 8e-09
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV QEG+ ELRKIAVRFEEKI+T+A SQ
Sbjct: 15 RQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQ 59
>ref|XP_003547623.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X1 [Glycine max]
Length = 1313
Score = 66.2 bits (160), Expect = 8e-09
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV VQEG+ EL+KIA RFEEKIFT+A SQ
Sbjct: 30 RQRIVNKIMDTLKRHLPVSVQEGLHELQKIAQRFEEKIFTAATSQ 74
>emb|CBI40659.3| unnamed protein product [Vitis vinifera]
Length = 114
Score = 66.2 bits (160), Expect = 8e-09
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV QEG+ ELRKIAVRFEEKI+T+A SQ
Sbjct: 15 RQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQ 59
>gb|EOY25953.1| Uncharacterized protein TCM_027312 [Theobroma cacao]
Length = 1367
Score = 65.9 bits (159), Expect = 1e-08
Identities = 34/45 (75%), Positives = 37/45 (82%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLP QEG+ ELRKIAVRFEEKIFT+A SQ
Sbjct: 31 RQRIVNKIMDTLKRHLPFSGQEGLNELRKIAVRFEEKIFTAASSQ 75
>gb|EOY25958.1| Uncharacterized protein TCM_027316 [Theobroma cacao]
Length = 1032
Score = 65.5 bits (158), Expect = 1e-08
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI TL RHLP QEG+ ELRKIAVRFEEKIFT+A SQ
Sbjct: 31 RQRIVNKITDTLKRHLPFSGQEGLNELRKIAVRFEEKIFTAASSQ 75
>tpg|DAA48539.1| TPA: hypothetical protein ZEAMMB73_618405 [Zea mays]
Length = 540
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL +HLPV V EG+ EL KIAVRFEEKI+T+A SQ
Sbjct: 45 RQRIVNKIMETLKKHLPVSVPEGLTELHKIAVRFEEKIYTAATSQ 89
>ref|XP_002332445.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQV 140
RQRI NKI+ TL RHLP QEG+ EL+KIAVRFEEKI+T+A +QV
Sbjct: 31 RQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATNQV 76
>gb|ACG48955.1| hypothetical protein [Zea mays] gi|413921728|gb|AFW61660.1|
hypothetical protein ZEAMMB73_514492 [Zea mays]
Length = 89
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQV 140
R RI NKI+ TL +HLPV V EG+ EL KIAVRFEEKI+T+A SQV
Sbjct: 41 RHRIVNKIMETLKKHLPVSVPEGLTELHKIAVRFEEKIYTAATSQV 86
>ref|XP_006359328.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X3 [Solanum tuberosum]
Length = 1349
Score = 63.9 bits (154), Expect = 4e-08
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV QEG+ EL+KIAVRFEEKI+++A SQ
Sbjct: 39 RQRIVNKIMETLKRHLPVSGQEGVQELKKIAVRFEEKIYSAATSQ 83
>ref|XP_006359327.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X2 [Solanum tuberosum]
Length = 1352
Score = 63.9 bits (154), Expect = 4e-08
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV QEG+ EL+KIAVRFEEKI+++A SQ
Sbjct: 39 RQRIVNKIMETLKRHLPVSGQEGVQELKKIAVRFEEKIYSAATSQ 83
>ref|XP_006359326.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X1 [Solanum tuberosum]
Length = 1355
Score = 63.9 bits (154), Expect = 4e-08
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV QEG+ EL+KIAVRFEEKI+++A SQ
Sbjct: 39 RQRIVNKIMETLKRHLPVSGQEGVQELKKIAVRFEEKIYSAATSQ 83
>ref|XP_002298205.2| hypothetical protein POPTR_0001s21210g [Populus trichocarpa]
gi|550347800|gb|EEE83010.2| hypothetical protein
POPTR_0001s21210g [Populus trichocarpa]
Length = 540
Score = 63.9 bits (154), Expect = 4e-08
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLP QEG+ EL+KIAVRFEEKI+T+A SQ
Sbjct: 31 RQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQ 75
>ref|XP_002303194.2| hypothetical protein POPTR_0003s01980g, partial [Populus
trichocarpa] gi|550342176|gb|EEE78173.2| hypothetical
protein POPTR_0003s01980g, partial [Populus trichocarpa]
Length = 145
Score = 63.9 bits (154), Expect = 4e-08
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLP QEG+ EL+KIAVRFEEKI+T+A SQ
Sbjct: 59 RQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQ 103
>ref|XP_004236821.1| PREDICTED: uncharacterized protein LOC101257852 [Solanum
lycopersicum]
Length = 1342
Score = 63.9 bits (154), Expect = 4e-08
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV QEG+ EL+KIAVRFEEKI+++A SQ
Sbjct: 41 RQRIVNKIMETLKRHLPVSGQEGVQELKKIAVRFEEKIYSAATSQ 85
>ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago truncatula]
gi|355487003|gb|AES68206.1| hypothetical protein
MTR_2g104400 [Medicago truncatula]
Length = 1289
Score = 63.9 bits (154), Expect = 4e-08
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3
Query: 3 RQRIANKIVVTLGRHLPVPVQEGMLELRKIAVRFEEKIFTSAKSQ 137
RQRI NKI+ TL RHLPV QEG+ ELRKIA RFEEKI+T+A SQ
Sbjct: 30 RQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQRFEEKIYTAATSQ 74