BLASTX nr result
ID: Atropa21_contig00040974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040974
(832 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A... 69 3e-15
ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein A... 69 3e-15
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A... 69 3e-15
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 67 1e-14
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 67 1e-14
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A... 60 2e-11
ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein A... 75 4e-11
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 59 1e-10
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A... 57 1e-10
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A... 72 2e-10
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588... 57 3e-10
ref|XP_006341888.1| PREDICTED: uncharacterized protein LOC102596... 61 4e-07
>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 399
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 25/56 (44%), Positives = 41/56 (73%)
Frame = -3
Query: 218 IAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGLT 51
+ AY+++ + + Q+ WPW+ IWK +IP KV+CF WL+A EA LTQ+ + ++G+T
Sbjct: 218 VGAAYRLMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGIT 273
Score = 40.4 bits (93), Expect(2) = 3e-15
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -2
Query: 75 NVEKEGINLCSRCYLCEKQAETANH 1
NV K GI LCSRC+LC + +ET NH
Sbjct: 266 NVMKRGITLCSRCFLCGETSETVNH 290
>ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 330
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 25/56 (44%), Positives = 41/56 (73%)
Frame = -3
Query: 218 IAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGLT 51
+ AY+++ + + Q+ WPW+ IWK +IP KV+CF WL+A EA LTQ+ + ++G+T
Sbjct: 236 VGAAYRLMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGIT 291
Score = 40.4 bits (93), Expect(2) = 3e-15
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -2
Query: 75 NVEKEGINLCSRCYLCEKQAETANH 1
NV K GI LCSRC+LC + +ET NH
Sbjct: 284 NVMKRGITLCSRCFLCGETSETVNH 308
>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 323
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 25/56 (44%), Positives = 41/56 (73%)
Frame = -3
Query: 218 IAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGLT 51
+ AY+++ + + Q+ WPW+ IWK +IP KV+CF WL+A EA LTQ+ + ++G+T
Sbjct: 142 VGAAYRLMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGIT 197
Score = 40.4 bits (93), Expect(2) = 3e-15
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -2
Query: 75 NVEKEGINLCSRCYLCEKQAETANH 1
NV K GI LCSRC+LC + +ET NH
Sbjct: 190 NVMKRGITLCSRCFLCGETSETVNH 214
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 67.0 bits (162), Expect(2) = 1e-14
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = -3
Query: 218 IAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGLT 51
+ AY+++ + + Q WPWK +WK +IP KV+CF WL+A EA LTQ+ + ++G+T
Sbjct: 375 VHSAYRLMDESSQQSPIWPWKQVWKCRIPHKVSCFIWLLAKEAALTQDNVMKRGIT 430
Score = 39.7 bits (91), Expect(2) = 1e-14
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2
Query: 75 NVEKEGINLCSRCYLCEKQAETANH 1
NV K GI LCSRC+LC + ET NH
Sbjct: 423 NVMKRGITLCSRCFLCGETLETVNH 447
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 67.0 bits (162), Expect(2) = 1e-14
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = -3
Query: 218 IAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGLT 51
+ AY+++ + + Q WPWK +WK +IP KV+CF WL+A EA LTQ+ + ++G+T
Sbjct: 269 VHSAYRLMDESSQQSPIWPWKQVWKCRIPHKVSCFIWLLAKEAALTQDNVMKRGIT 324
Score = 39.7 bits (91), Expect(2) = 1e-14
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2
Query: 75 NVEKEGINLCSRCYLCEKQAETANH 1
NV K GI LCSRC+LC + ET NH
Sbjct: 317 NVMKRGITLCSRCFLCGETLETVNH 341
>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 217
Score = 60.1 bits (144), Expect(2) = 2e-11
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = -3
Query: 221 TIAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRK 60
T+ AY+ L Q WPW+MIW+ +IP KV F+WL+A +A+LT E L ++
Sbjct: 35 TVKSAYRELRSTEEQHAGWPWRMIWRTEIPYKVNYFTWLLAKQAVLTHENLNKR 88
Score = 35.8 bits (81), Expect(2) = 2e-11
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2
Query: 75 NVEKEGINLCSRCYLCEKQAETANH 1
N+ K NL S CYLCE+Q ET NH
Sbjct: 84 NLNKRKPNLRSSCYLCEEQVETVNH 108
>ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 258
Score = 74.7 bits (182), Expect = 4e-11
Identities = 31/60 (51%), Positives = 44/60 (73%)
Frame = -3
Query: 221 TIAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGLTYVP 42
T+ AY+I++++ +QV PWK+IWKVKIP KV F+WLV EA+LTQE L ++G+ P
Sbjct: 152 TVCSAYRIMNQMGSQVNFLPWKLIWKVKIPYKVVVFTWLVVKEAVLTQENLMKRGIQMCP 211
>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
Length = 305
Score = 59.3 bits (142), Expect(2) = 1e-10
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = -3
Query: 221 TIAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGLTY 48
T+ E Y+ L N + WPWK+IW+ K+P KV F+W+ EA LTQ+ +K++ + +
Sbjct: 120 TVKEGYQQLCSRNPVIANWPWKLIWRTKLPPKVVFFTWIALYEACLTQDNIKKRKIQF 177
Score = 33.9 bits (76), Expect(2) = 1e-10
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 75 NVEKEGINLCSRCYLCEKQAETANH 1
N++K I +RCY+C+K+AET H
Sbjct: 169 NIKKRKIQFPNRCYMCKKEAETPRH 193
>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 514
Score = 56.6 bits (135), Expect(2) = 1e-10
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3
Query: 209 AYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKG 57
AY L + WPWK IWK + P KV CF+WLV +A LT + L+R+G
Sbjct: 369 AYNYLMDLEQFNDPWPWKEIWKARAPFKVVCFTWLVVWKACLTHDKLQRRG 419
Score = 36.2 bits (82), Expect(2) = 1e-10
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = -2
Query: 72 VEKEGINLCSRCYLCEKQAETANH 1
+++ G +LCSRC+LC ++AET H
Sbjct: 415 LQRRGFHLCSRCFLCHQEAETNGH 438
>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 397
Score = 72.4 bits (176), Expect = 2e-10
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = -3
Query: 221 TIAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGLTYVP 42
T++ AY+ ++++ +QV PWK+IWKVKIP KV F+WLV EA+LTQE L ++G+ P
Sbjct: 215 TVSSAYRNMNQMGSQVNFLPWKLIWKVKIPYKVVVFTWLVVKEAVLTQENLMKRGIQMCP 274
>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
Length = 255
Score = 57.4 bits (137), Expect(2) = 3e-10
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = -3
Query: 167 WPWKMIWKVKIPLKVACFSWLVANEAILTQEMLKRKGL 54
WPWK+IWK+KIP KV+ F+WL +A LT E+++R+G+
Sbjct: 90 WPWKLIWKIKIPHKVSGFTWLAIRKACLTHEVIQRRGI 127
Score = 34.3 bits (77), Expect(2) = 3e-10
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = -2
Query: 72 VEKEGINLCSRCYLCEKQAETANH 1
+++ GI +CSRC++C ++AE +H
Sbjct: 122 IQRRGIQICSRCFMCGEEAEVNSH 145
>ref|XP_006341888.1| PREDICTED: uncharacterized protein LOC102596385 [Solanum tuberosum]
Length = 730
Score = 61.2 bits (147), Expect = 4e-07
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = -3
Query: 221 TIAEAYKILSKVNNQVGCWPWKMIWKVKIPLKVACFSWLVANEAIL 84
T+ AY+ L + + WPWKMIWKVK+P KVACF+WLVA +A L
Sbjct: 486 TVKSAYRHLDRPAAMLLPWPWKMIWKVKVPHKVACFTWLVARQATL 531