BLASTX nr result
ID: Atropa21_contig00040943
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040943
(656 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 75 2e-11
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part... 75 2e-11
gb|AAO38009.1| putative reverse transcriptase [Oryza sativa Japo... 73 8e-11
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 73 8e-11
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 71 3e-10
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 70 4e-10
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub... 70 7e-10
ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844... 69 9e-10
ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248... 69 1e-09
ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcript... 69 1e-09
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 69 2e-09
emb|CAD39338.1| OSJNBa0094O15.6 [Oryza sativa Japonica Group] 69 2e-09
ref|XP_006595463.1| PREDICTED: uncharacterized protein LOC102660... 68 3e-09
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 68 3e-09
ref|XP_002448521.1| hypothetical protein SORBIDRAFT_06g028350 [S... 67 4e-09
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 67 4e-09
gb|EMT04040.1| hypothetical protein F775_01074 [Aegilops tauschii] 67 5e-09
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript... 67 6e-09
gb|ABK28243.1| unknown [Arabidopsis thaliana] 67 6e-09
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali... 67 6e-09
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 75.1 bits (183), Expect = 2e-11
Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Frame = +2
Query: 56 GSRWVWNTL---NT--PKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTH 220
G R W L NT P+ FI WL H RL T++RL G+ +D SC C ESM H
Sbjct: 338 GQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFCSEE-ESMNH 396
Query: 221 LFFDCPFSSSCLDGILQWMDVRVQNREVQGLWRRMTRNNKGR-NRREFITVVFAALVYRI 397
LFF C S +LQW+ +R + +T + KG+ R + + A +Y I
Sbjct: 397 LFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGTRAAVLKMAIAETIYEI 456
Query: 398 WWARNEVVWKQHVPLPKV 451
W RN ++ Q + + V
Sbjct: 457 WNIRNNKIFGQAIDINTV 474
>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
gi|482569649|gb|EOA33837.1| hypothetical protein
CARUB_v10021318mg, partial [Capsella rubella]
Length = 290
Score = 74.7 bits (182), Expect = 2e-11
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 53 PGSRWVWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHLFFD 232
P + VW PKH FI W+V RL TR+RL+ G+ C +C ++ ES HLFF+
Sbjct: 112 PWFKSVWFKERIPKHAFISWVVIRNRLTTRDRLRGWGMNVPSECLLCTSSAESRLHLFFE 171
Query: 233 CPFSSSCLDGILQWMDVRVQNR-EVQGLWRRMTRNNKGRNRREFITVVFAALVYRIWWAR 409
C +S + E W R +R+ K R ++F A+VY +W R
Sbjct: 172 CAYSHEVWSSFFTHPSLSPPAMFEDIVAWVRSSRSKK---LRTICKLIFQAVVYGLWRER 228
Query: 410 NEVVWKQHVPLPKVVCASIQ 469
N + P ++ IQ
Sbjct: 229 NSRLHTSSFKSPAIIIKEIQ 248
>gb|AAO38009.1| putative reverse transcriptase [Oryza sativa Japonica Group]
gi|28875978|gb|AAO59987.1| putative reverse transcriptase
[Oryza sativa Japonica Group] gi|108709646|gb|ABF97441.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1349
Score = 72.8 bits (177), Expect = 8e-11
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Frame = +2
Query: 2 YTISSRYSGRRGEMKVWPGSRWV------WNTLNTPKHCFIGWLVAHKRLLTRERLKNIG 163
+T + +YS + + + GS + W+ PKH F GWL+ H+R LT E L
Sbjct: 1174 WTANGQYSAKSAYLAQFQGSNALIEFTPLWSAFAEPKHHFFGWLILHQRTLTAENLLRRH 1233
Query: 164 ITNDDSCAICGNAVESMTHLFFDCPFSSSCLDGILQWMDVRVQNREVQG----LWRRMTR 331
D C++C +A E HL +CPF+ + I WM+ ++ +QG W
Sbjct: 1234 WPCDWICSLCNSAFEDAAHLAKECPFTVTVWTQICIWMNFQLPQHHLQGNLSDWWSSFCT 1293
Query: 332 NNKGRNRREFITVVFAALVYRIWWARNEVVWKQ 430
+ +NR + + + + +W RN +++Q
Sbjct: 1294 ISPRQNRNKVLGALITTW-WNVWLERNRRIFQQ 1325
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 72.8 bits (177), Expect = 8e-11
Identities = 44/134 (32%), Positives = 67/134 (50%)
Frame = +2
Query: 68 VWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHLFFDCPFSS 247
VW + PK FI W+VAH RL TR+RL+ G + +C +C + ES HLFF C FSS
Sbjct: 990 VWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQFSS 1049
Query: 248 SCLDGILQWMDVRVQNREVQGLWRRMTRNNKGRNRREFITVVFAALVYRIWWARNEVVWK 427
++ +++ + + L +T ++ RN ++F A VY IW RN +
Sbjct: 1050 EIWSFFMRALNLNPPPQFMHCLLWTLTA-SRDRNITLITKLLFHASVYFIWRERNLRIHS 1108
Query: 428 QHVPLPKVVCASIQ 469
V ++ IQ
Sbjct: 1109 NSVRPAHLIIKEIQ 1122
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 70.9 bits (172), Expect = 3e-10
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +2
Query: 53 PGSRW---VWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHL 223
P W VW +TPK+ F+ WL RL T +R+K +C +C NA E+ HL
Sbjct: 1350 PQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHL 1409
Query: 224 FFDCPFSSSCLDGILQWMDVRVQNREVQGLWRRMTRNNKGRNRREFITVVFAALVYRIWW 403
FF C ++S + + Q + +R+ L+ + +N R+ VF A +Y IW
Sbjct: 1410 FFSCQYTSYVWEALTQRLLSTNYSRDWNRLFTLLCTSNLPRDHLFLFRYVFQASIYHIWR 1469
Query: 404 ARN 412
RN
Sbjct: 1470 ERN 1472
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 70.5 bits (171), Expect = 4e-10
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Frame = +2
Query: 53 PGSRWVWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHLFFD 232
P + VW PKH FI W+ A KRL TR+RL G+ C +C E+ HLFF
Sbjct: 153 PWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQ 212
Query: 233 CPFSSSCLDGILQWMDVRVQNREVQG---LWRRMTRNNKGRNRREFITVVFAALVYRIWW 403
C FS+ + + + + G LW + ++K N I ++F A VY IW
Sbjct: 213 CQFSNEIWSFFM--IRAGMTPPHLFGPILLWLKSASSSK--NLSLIIKLLFQASVYLIWR 268
Query: 404 ARNEVVWKQHVPLPKVVCASIQQ 472
RN + H P + +QQ
Sbjct: 269 ERNCRIHTTHSRTPPTIIKEVQQ 291
>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 69.7 bits (169), Expect = 7e-10
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Frame = +2
Query: 53 PGSRW---VWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHL 223
P + W +W + TPK+ FI WL RL T +R+ + + SC C E+ HL
Sbjct: 271 PRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSWNAGVNLSCVFCQEQTETRNHL 330
Query: 224 FFDCPFSSSCLDGILQWMDVRVQNREVQGLWRRMTRNNKGRNRREFITVVFAALVYRIWW 403
FF C +S G+ + R + + + + +T G NR + F LVY IW
Sbjct: 331 FFTCRYSREVWSGLTSKLLTRHYSTDWTTILKLLTDKTLGNNRLFLLRYAFQILVYSIWK 390
Query: 404 ARNEVVWKQH--VPLPKVV 454
RN ++H PLP +
Sbjct: 391 ERNS---RRHGEEPLPSAL 406
>ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844973 [Brachypodium
distachyon]
Length = 448
Score = 69.3 bits (168), Expect = 9e-10
Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 7/165 (4%)
Frame = +2
Query: 2 YTISSRYSGRRGEMKVWPGSRWVWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDS 181
Y+ SS Y + R +W+ PK F WL RL T +RL G +
Sbjct: 269 YSTSSAYKVQFFGATACNFHRLIWSPWALPKCRFFAWLAIQNRLWTNDRLAARGWPHQPL 328
Query: 182 CAICGNAVESMTHLFFDCPFSSSCLDGILQWMDV-------RVQNREVQGLWRRMTRNNK 340
C +CG E+ HL FDC +S G+ W+DV V V W +
Sbjct: 329 CKLCGVCPETAAHLLFDCRYSKRIWSGVSVWIDVPALLYPDNVTADTVGSRWASLASPRG 388
Query: 341 GRNRREFITVVFAALVYRIWWARNEVVWKQHVPLPKVVCASIQQE 475
G R+ I + + + IW RN V+ LP+++ I+ E
Sbjct: 389 G--LRKGIRTILMLVTWEIWKERNARVFNNVHVLPQILITRIKDE 431
>ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248660 [Solanum
lycopersicum]
Length = 187
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = +2
Query: 89 PKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHLFFDCPFSSSCLDGIL 268
PK CF W++ +++L T +RL G+ D C +C A ESM HLF C ++ + + +L
Sbjct: 46 PKACFTLWILMNRKLATVDRLTKWGMILDRGCVMCKRAEESMEHLFIHCHYAEAIWERLL 105
Query: 269 QWMDVRV-QNREVQGLWRRMTRNNKGRN-RREFITVVFAALVYRIWWARNEVVWKQ 430
+W++V++ + + +N KG+ R + + A VY +W RN+ ++++
Sbjct: 106 RWINVQINMPKSWTDFIQWCVKNGKGKTARAQMFKGILAEGVYGLWSKRNKRIFEE 161
>ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332193871|gb|AEE31992.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 320
Score = 68.9 bits (167), Expect = 1e-09
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 53 PGSRWVWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHLFFD 232
P + VW + PKH FI W+VA RL TR+RL++ G++ C +C + ES HLFF+
Sbjct: 150 PWYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFE 209
Query: 233 CPFSSSCLDGILQWMDVRVQNREVQGL-WRRMTRNNKGRNRREFITVVFAALVYRIWWAR 409
CPF + ++ + + L W + ++ +N I + F A VY IW R
Sbjct: 210 CPFCGAVWRFFTGRANLFPPAQLMYCLIW--LLNPSRDKNTTLIIRLAFQAYVYAIWRER 267
Query: 410 N 412
N
Sbjct: 268 N 268
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 68.6 bits (166), Expect = 2e-09
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +2
Query: 38 EMKVWPGSRWVWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMT 217
E VW R + N TPK FI WL RL T ER+ C +CGN +E++
Sbjct: 956 ENVVW--KRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQ 1013
Query: 218 HLFFDCPFSSSCLDGILQWMDVRVQ--NREVQGLWRRMTRNNKGRNRREFITVVFAALVY 391
HLFF+C +S +L +++++ Q + + L + R+ K RN+ ++F VY
Sbjct: 1014 HLFFNCIYSKEIWGKVLLYLNLQPQADAQAKKELAIKKARSTKDRNK--LYVMMFTESVY 1071
Query: 392 RIWWARNEVVWK 427
IW RN V++
Sbjct: 1072 AIWLLRNAKVFR 1083
>emb|CAD39338.1| OSJNBa0094O15.6 [Oryza sativa Japonica Group]
Length = 699
Score = 68.6 bits (166), Expect = 2e-09
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Frame = +2
Query: 2 YTISSRYSGRRGEMKVWPGSRWV------WNTLNTPKHCFIGWLVAHKRLLTRERLKNIG 163
+T + +YS + + + GS + W+ PKH F GWL+ H+R LT E L
Sbjct: 524 WTANGQYSAKSAYLAQFQGSNALTEFTPLWSAFAEPKHRFFGWLILHQRTLTAENLLRRH 583
Query: 164 ITNDDSCAICGNAVESMTHLFFDCPFSSSCLDGILQWMDVRVQNREVQG----LWRRMTR 331
D ++C +A E HL +CPF+ + I WM+ ++ +QG W
Sbjct: 584 WPCDWIRSLCNSAFEDAAHLAKECPFTVTVWTQICIWMNFQLPQHHLQGNLSDWWSSFCT 643
Query: 332 NNKGRNRREFITVVFAALVYRIWWARNEVVWKQ 430
+ +NR + + + + +W RN +++Q
Sbjct: 644 ISPRQNRNKVLRALITTW-WNVWLERNRRIFQQ 675
>ref|XP_006595463.1| PREDICTED: uncharacterized protein LOC102660851 [Glycine max]
Length = 199
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 110 WLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHLFFDCPFSSSCLDGILQWMDVRV 289
W+V H RL T +RL G+ + C +C ES+THLFF+C + + D +L W+++
Sbjct: 59 WMVCHGRLPTMDRLHRFGMIQETICKLCKEKNESLTHLFFECGMTKTVWDQVLHWLNL-- 116
Query: 290 QNREVQGLWRR-----MTRNNKGRNRREFITVVFAALVYRIWWARNEVVW 424
N ++G W +++ K R + + F VY IW RN V+
Sbjct: 117 -NHRIKG-WNEELDWIISQTGKKGWRASILKLAFTEAVYGIWHHRNGTVF 164
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/116 (30%), Positives = 54/116 (46%)
Frame = +2
Query: 68 VWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVESMTHLFFDCPFSS 247
VW PKH F WL H RL T +R+ + D +C +C A+ES HLFF CPF++
Sbjct: 309 VWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSCPFAT 368
Query: 248 SCLDGILQWMDVRVQNREVQGLWRRMTRNNKGRNRREFITVVFAALVYRIWWARNE 415
+ + + + + Q + ++RN R + +Y +W RNE
Sbjct: 369 EIWEPLAKTIYNTCFYTDWQTIINNVSRNWPDRIAGFLARCILQVTIYTLWRERNE 424
>ref|XP_002448521.1| hypothetical protein SORBIDRAFT_06g028350 [Sorghum bicolor]
gi|241939704|gb|EES12849.1| hypothetical protein
SORBIDRAFT_06g028350 [Sorghum bicolor]
Length = 388
Score = 67.4 bits (163), Expect = 4e-09
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
Frame = +2
Query: 2 YTISSRYSGRRGEMKVWPGSRWVWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDS 181
Y+ SS Y G++ +W T PK WL H+RL T ER K G+ +D
Sbjct: 202 YSASSAYRAFFAGSTRLLGAKELWQTKAPPKIKMFFWLALHRRLWTAERRKRHGLQINDD 261
Query: 182 CAICGNAVESMTHLFFDCPFSSSCLDGI---LQWMDVRVQNREVQGLWRRMTRNNKGRNR 352
CA+C E+++HLF C F+ G+ LQ +D+ G W R +
Sbjct: 262 CALCDQHAETVSHLFLACIFARQVWFGVLDRLQMVDLMPSGDHELGDWWIDLRKRLDVDS 321
Query: 353 REFITVVFAALVYRIWWARNEVVWKQHVPLPKVVCASIQQE 475
R + + +R+W RN V+ + V A+I E
Sbjct: 322 RGLFDSLLLLISWRLWKERNARVFGRAPSSVHEVVAAIAAE 362
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 67.4 bits (163), Expect = 4e-09
Identities = 40/138 (28%), Positives = 66/138 (47%)
Frame = +2
Query: 32 RGEMKVWPGSRWVWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITNDDSCAICGNAVES 211
+G +K W + +W + TPK FI WL AH RL T +++ + C +C + ES
Sbjct: 1233 QGLVKQW--HKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAES 1290
Query: 212 MTHLFFDCPFSSSCLDGILQWMDVRVQNREVQGLWRRMTRNNKGRNRREFITVVFAALVY 391
HLFF C FSS D + + + + L ++ + +R + VF A ++
Sbjct: 1291 RDHLFFSCNFSSHIWDRLTRRLLLCRYTTNFPALLLLLSGQDFSGTKRFLLRYVFQATIH 1350
Query: 392 RIWWARNEVVWKQHVPLP 445
+W RN+ ++H LP
Sbjct: 1351 TLWRERNK---RRHGDLP 1365
>gb|EMT04040.1| hypothetical protein F775_01074 [Aegilops tauschii]
Length = 2105
Score = 67.0 bits (162), Expect = 5e-09
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 9/160 (5%)
Frame = +2
Query: 2 YTISSRYSGRRGEMKVWPGS------RWVWNTLNTPKHCFIGWLVAHKRLLTRERLKNIG 163
+T S YS + + GS + +W P+ F WL + R T +RL G
Sbjct: 1618 WTASGIYSASSCYLATFQGSMTCFSWKLIWKNWAPPRVKFFHWLASQDRCWTADRLARRG 1677
Query: 164 ITNDDSCAICGNAVESMTHLFFDCPFSSSCLDGILQWMDVRVQNREVQGL---WRRMTRN 334
+ + C +C A+E+M HL +CPF+ IL W+ + + W R
Sbjct: 1678 LQHQPRCPLCDQALETMRHLLLECPFARQTWHEILSWLRMTTAGPSHEDSLMDWWLQARQ 1737
Query: 335 NKGRNRREFITVVFAALVYRIWWARNEVVWKQHVPLPKVV 454
N R+ + + + IW RNE +++ PL + V
Sbjct: 1738 NTPTLMRKGLASIALLTPWMIWKQRNECIFEGAQPLVQEV 1777
>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
to a family of Arabidopsis thaliana predicted proteins,
which have similarity to reverse transcriptases; see
T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 332
Score = 66.6 bits (161), Expect = 6e-09
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Frame = +2
Query: 11 SSRYSGRRGEMKVWPGSR---W---VWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITN 172
S+R+S R + P S W VW + PKH FI W+VA RL TR+RL+N G++
Sbjct: 108 SNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSI 167
Query: 173 DDSCAICGNAVESMTHLFFDCPFSSSCLDGILQWMDVRVQN----REVQGLWRRMTRNNK 340
C +C +S HLFF+C FS G++ N ++ + ++
Sbjct: 168 PAECLLCNAHDDSRAHLFFECQFS-----GVVWRFFTASTNLNPPAQLMDCLNWLLSPSR 222
Query: 341 GRNRREFITVVFAALVYRIWWARNE 415
+N I + F + VY IW RN+
Sbjct: 223 EKNICLIIRLAFHSCVYAIWRERNQ 247
>gb|ABK28243.1| unknown [Arabidopsis thaliana]
Length = 297
Score = 66.6 bits (161), Expect = 6e-09
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Frame = +2
Query: 11 SSRYSGRRGEMKVWPGSR---W---VWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITN 172
S+R+S R + P S W VW + PKH FI W+VA RL TR+RL+N G++
Sbjct: 108 SNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSI 167
Query: 173 DDSCAICGNAVESMTHLFFDCPFSSSCLDGILQWMDVRVQN----REVQGLWRRMTRNNK 340
C +C +S HLFF+C FS G++ N ++ + ++
Sbjct: 168 PAECLLCNAHDDSRAHLFFECQFS-----GVVWRFFTASTNLNPPAQLMDCLNWLLSPSR 222
Query: 341 GRNRREFITVVFAALVYRIWWARNE 415
+N I + F + VY IW RN+
Sbjct: 223 EKNICLIIRLAFHSCVYAIWRERNQ 247
>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
Length = 296
Score = 66.6 bits (161), Expect = 6e-09
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Frame = +2
Query: 11 SSRYSGRRGEMKVWPGSR---W---VWNTLNTPKHCFIGWLVAHKRLLTRERLKNIGITN 172
S+R+S R + P S W VW + PKH FI W+VA RL TR+RL+N G++
Sbjct: 108 SNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSI 167
Query: 173 DDSCAICGNAVESMTHLFFDCPFSSSCLDGILQWMDVRVQN----REVQGLWRRMTRNNK 340
C +C +S HLFF+C FS G++ N ++ + ++
Sbjct: 168 PAECLLCNAHDDSRAHLFFECQFS-----GVVWRFFTASTNLNPPAQLMDCLNWLLSPSR 222
Query: 341 GRNRREFITVVFAALVYRIWWARNE 415
+N I + F + VY IW RN+
Sbjct: 223 EKNICLIIRLAFHSCVYAIWRERNQ 247