BLASTX nr result

ID: Atropa21_contig00040819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040819
         (545 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11

>ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Solanum lycopersicum]
          Length = 561

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/43 (90%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   RVLALAASGDVDPETWGVLVDKFVTDIHNVCAILDKILSENEV 130
           RVLALAASGDVDPETWGVLV KFVTDI NVCA+LDK LSENEV
Sbjct: 519 RVLALAASGDVDPETWGVLVAKFVTDIQNVCAVLDKTLSENEV 561


>ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Solanum tuberosum]
          Length = 564

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   RVLALAASGDVDPETWGVLVDKFVTDIHNVCAILDKILSENEV 130
           RVLALAASGDVD ETWGVLV KFVT++ NVC++LDK LSENEV
Sbjct: 522 RVLALAASGDVDSETWGVLVAKFVTNVQNVCSVLDKTLSENEV 564


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