BLASTX nr result

ID: Atropa21_contig00040794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040794
         (593 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363820.1| PREDICTED: F-box/LRR-repeat protein At5g0291...   179   6e-43
ref|XP_004231931.1| PREDICTED: F-box/LRR-repeat protein At3g0336...   169   4e-40
ref|XP_006344859.1| PREDICTED: putative F-box/LRR-repeat protein...    89   1e-15
ref|XP_006344860.1| PREDICTED: putative F-box/LRR-repeat protein...    85   1e-14
ref|XP_004251346.1| PREDICTED: putative F-box protein At1g49610-...    82   1e-13
ref|XP_006340586.1| PREDICTED: putative F-box/LRR-repeat protein...    77   4e-12
ref|XP_006340124.1| PREDICTED: uncharacterized protein LOC102595...    73   6e-11

>ref|XP_006363820.1| PREDICTED: F-box/LRR-repeat protein At5g02910-like isoform X1
           [Solanum tuberosum] gi|565396423|ref|XP_006363821.1|
           PREDICTED: F-box/LRR-repeat protein At5g02910-like
           isoform X2 [Solanum tuberosum]
          Length = 526

 Score =  179 bits (453), Expect = 6e-43
 Identities = 98/147 (66%), Positives = 104/147 (70%)
 Frame = -2

Query: 592 PSLENLTILHQEGDFLA*XXXXXXXXXXXXXXXXXXXXDLSVDNSLSLHENVSEGSLQNL 413
           P LENLTILH+EGDF                       D S DNSLSLHEN+ +GSLQNL
Sbjct: 391 PYLENLTILHEEGDFFV-----------WDEDLEDEEFDWSGDNSLSLHENIFKGSLQNL 439

Query: 412 KHAEITPNCCSCLDSADTTELLAEFLKSFLEQAKSLEKQVIAPVHKGCNISSTNISKVIK 233
           KH E+T NCCSC   AD TE L+EFLKS LE AK+LEK VIAP H GCNISS NISKV K
Sbjct: 440 KHVEVTSNCCSCQHKADATERLSEFLKSLLEHAKNLEKLVIAPWHNGCNISSANISKVFK 499

Query: 232 NLLAFPRASNIAVVSLGSVSGVDFPGE 152
           NLLAFP ASNIAVVSLGSVSGVDF GE
Sbjct: 500 NLLAFPGASNIAVVSLGSVSGVDFSGE 526


>ref|XP_004231931.1| PREDICTED: F-box/LRR-repeat protein At3g03360-like [Solanum
           lycopersicum]
          Length = 526

 Score =  169 bits (429), Expect = 4e-40
 Identities = 93/147 (63%), Positives = 99/147 (67%)
 Frame = -2

Query: 592 PSLENLTILHQEGDFLA*XXXXXXXXXXXXXXXXXXXXDLSVDNSLSLHENVSEGSLQNL 413
           P LENLTILH+EGDF                           D SLSLHEN+ +GSLQNL
Sbjct: 391 PYLENLTILHEEGDFFVWDEYLEEEVFDWLG-----------DKSLSLHENIFKGSLQNL 439

Query: 412 KHAEITPNCCSCLDSADTTELLAEFLKSFLEQAKSLEKQVIAPVHKGCNISSTNISKVIK 233
           KH E+T NCCSC   AD TE L+EFLKS LE AK+LEK VIAP H GCNISS NISKVIK
Sbjct: 440 KHVEVTSNCCSCQHKADATERLSEFLKSLLEHAKNLEKLVIAPWHNGCNISSANISKVIK 499

Query: 232 NLLAFPRASNIAVVSLGSVSGVDFPGE 152
           NLLA P ASNIAVVSLG VSG DF GE
Sbjct: 500 NLLALPGASNIAVVSLGLVSGFDFSGE 526


>ref|XP_006344859.1| PREDICTED: putative F-box/LRR-repeat protein At5g02700-like
           [Solanum tuberosum]
          Length = 459

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 52/101 (51%), Positives = 68/101 (67%)
 Frame = -2

Query: 475 LSVDNSLSLHENVSEGSLQNLKHAEITPNCCSCLDSADTTELLAEFLKSFLEQAKSLEKQ 296
           L + + LS  EN+ + SLQNLK+ ++ P  CS   ++D TEL  +FLK  LE A +LEK 
Sbjct: 354 LELYDLLSFEENIFKVSLQNLKNVKVMP-FCSGTRTSDATEL-DQFLKFLLEHAINLEKM 411

Query: 295 VIAPVHKGCNISSTNISKVIKNLLAFPRASNIAVVSLGSVS 173
           VI P HKGCN  STNIS+++K LL FPR S  AV+S G V+
Sbjct: 412 VIVPKHKGCNSCSTNISQLMKCLLLFPRTSISAVISSGPVT 452


>ref|XP_006344860.1| PREDICTED: putative F-box/LRR-repeat protein At3g28410-like
           [Solanum tuberosum]
          Length = 484

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 52/98 (53%), Positives = 63/98 (64%)
 Frame = -2

Query: 466 DNSLSLHENVSEGSLQNLKHAEITPNCCSCLDSADTTELLAEFLKSFLEQAKSLEKQVIA 287
           D  LS  EN+ + SLQNLK+ ++ P  CS    +D TEL  +FLK  LE A +LEK VI 
Sbjct: 381 DKYLSFEENIFKVSLQNLKNVKVMP-FCSRTGRSDETEL-DQFLKFLLEHAINLEKLVIV 438

Query: 286 PVHKGCNISSTNISKVIKNLLAFPRASNIAVVSLGSVS 173
           P HK CN  STN S ++K LLAFP  S  AV+SLG VS
Sbjct: 439 PEHKECNNCSTNTSYLMKYLLAFPTTSIRAVISLGKVS 476


>ref|XP_004251346.1| PREDICTED: putative F-box protein At1g49610-like [Solanum
           lycopersicum]
          Length = 544

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 51/101 (50%), Positives = 63/101 (62%)
 Frame = -2

Query: 475 LSVDNSLSLHENVSEGSLQNLKHAEITPNCCSCLDSADTTELLAEFLKSFLEQAKSLEKQ 296
           L  D  LSL EN+ +  LQNLK+ ++ P  CS    +D TEL  +FLK  LE A +LEK 
Sbjct: 438 LPEDKYLSLEENIFKDFLQNLKNVKVMP-FCSPKRRSDATEL-HQFLKFLLEHAINLEKL 495

Query: 295 VIAPVHKGCNISSTNISKVIKNLLAFPRASNIAVVSLGSVS 173
           VI P HK CN  STN S ++K LL FP  S  A++SLG VS
Sbjct: 496 VIVPEHKECNSCSTNTSCLMKYLLDFPTFSISAIISLGPVS 536


>ref|XP_006340586.1| PREDICTED: putative F-box/LRR-repeat protein At3g28410-like
           [Solanum tuberosum]
          Length = 381

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 47/92 (51%), Positives = 59/92 (64%)
 Frame = -2

Query: 457 LSLHENVSEGSLQNLKHAEITPNCCSCLDSADTTELLAEFLKSFLEQAKSLEKQVIAPVH 278
           LSL EN+ +  LQNLK  ++ P   S  D+ D T+L  +FLK  LE A +LEK VI P H
Sbjct: 270 LSLEENIFKVVLQNLKDVKVMP-LYSHTDTNDATKL-DQFLKFLLEHAINLEKLVIVPEH 327

Query: 277 KGCNISSTNISKVIKNLLAFPRASNIAVVSLG 182
           K CN  ST+ S + KNLLAFP  S  A++SLG
Sbjct: 328 KECNNCSTDTSNLKKNLLAFPTTSISAIISLG 359


>ref|XP_006340124.1| PREDICTED: uncharacterized protein LOC102595376 [Solanum tuberosum]
          Length = 117

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 46/94 (48%), Positives = 58/94 (61%)
 Frame = -2

Query: 457 LSLHENVSEGSLQNLKHAEITPNCCSCLDSADTTELLAEFLKSFLEQAKSLEKQVIAPVH 278
           LS  EN+ + SL NLK+ ++ P C   + S D T+L  +FLK  LE A +LEK VI P H
Sbjct: 17  LSFEENIFKVSLHNLKNVKVMPLCGGMVTS-DVTKL-DQFLKFLLEHAINLEKLVIVPEH 74

Query: 277 KGCNISSTNISKVIKNLLAFPRASNIAVVSLGSV 176
           K CN  STN S + KNLLAFP     A++SL  V
Sbjct: 75  KECNSCSTNTSNLKKNLLAFPTR---AIISLRPV 105


Top