BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040788
         (611 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353005.1| PREDICTED: pentatricopeptide repeat-containi...   143   3e-32
ref|XP_004233156.1| PREDICTED: pentatricopeptide repeat-containi...   132   1e-28

>ref|XP_006353005.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01860-like [Solanum tuberosum]
          Length = 509

 Score =  143 bits (361), Expect = 3e-32
 Identities = 83/155 (53%), Positives = 97/155 (62%), Gaps = 11/155 (7%)
 Frame = +2

Query: 179 MLTRNCCMFSTTYESFPWSTSTYPIFQDSC----------DFGRRGARVVSMAVSSNKAN 328
           ML+R+ CMFS TYES  WS+ TY I Q S            FGRR  RVV MAVS+N+AN
Sbjct: 1   MLSRSYCMFSATYESSTWSSPTYSISQSSSASTAASGTPLSFGRRKGRVVFMAVSNNRAN 60

Query: 329 HTXXXXXXXXXXXXXXXXDMDYTFKRVLYKDDEKTTQKPNIDDEIECEASSDGIDQELEL 508
           H                 DMDY+F RVLY++DE           +  EA SDG+D+ELEL
Sbjct: 61  HRKLPKNLRNPRRPKLPPDMDYSFNRVLYEEDEG----------VATEACSDGMDEELEL 110

Query: 509 QVEKERIYDDEG-IIWESDEMEAISSLFKGRIPQK 610
           +VEK R+ DD+G IIWESDEMEAISSLFKGRIPQK
Sbjct: 111 EVEKGRMCDDDGGIIWESDEMEAISSLFKGRIPQK 145


>ref|XP_004233156.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01860-like [Solanum lycopersicum]
          Length = 507

 Score =  132 bits (331), Expect = 1e-28
 Identities = 80/156 (51%), Positives = 92/156 (58%), Gaps = 12/156 (7%)
 Frame = +2

Query: 179 MLTRNCCMFSTTYESFPWSTSTYPIFQDSCD----------FGRRGARVVSMAVSSNKAN 328
           M +R+ CMFS TYESF WS+ TY I   S            F RR  RVV MAVS+N+AN
Sbjct: 1   MFSRSYCMFSATYESFTWSSCTYSISLASSASIASSVTSLCFRRRKGRVVFMAVSNNRAN 60

Query: 329 HTXXXXXXXXXXXXXXXXDMDYTFKRVLYKDDEKTTQKPNIDDEIECEASSDGIDQELEL 508
           H                 DMDY+FKRVLY+              +  EA SDGID+ELE+
Sbjct: 61  HRKLPKNLRNPRRPKLPPDMDYSFKRVLYEG-------------VVSEACSDGIDEELEM 107

Query: 509 QVEKERIYDD--EGIIWESDEMEAISSLFKGRIPQK 610
            VEK R+ DD  EGI+WESDEMEAISSLFKGRIPQK
Sbjct: 108 GVEKGRMCDDDDEGIMWESDEMEAISSLFKGRIPQK 143