BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040753
         (1271 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   286   1e-74
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   283   1e-73
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   239   2e-60
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   238   3e-60
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   237   7e-60
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   236   2e-59
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               234   4e-59
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   225   3e-56
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   224   6e-56
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                222   2e-55
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       219   1e-54
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   218   3e-54
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           218   3e-54
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   213   1e-52
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               211   4e-52
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   210   1e-51
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   209   2e-51
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   206   2e-50
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             201   5e-49
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   200   9e-49

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  286 bits (733), Expect = 1e-74
 Identities = 150/357 (42%), Positives = 224/357 (62%), Gaps = 5/357 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D FN++FFKK+W +I +++ E +LD F++  M K INCT+VTLIPK+      + +RP+ 
Sbjct: 462  DGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIA 521

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             CS LYK+ISK+LTKRLQ  ++  +D +Q  F+P R I DNIL++ ELI  Y ++ +S R
Sbjct: 522  CCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPR 581

Query: 498  CMLKLDLQKAYDSME*VFLQQV-----HCLEFISRICGVDHDVYTDSVLFYYAKWTTNSY 662
            C++K+D++KAYDS+E VFL+ +         FI  I      V    +L        ++ 
Sbjct: 582  CVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQ 641

Query: 663  LLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFYT 842
              + R+GDPLSP+LF + M++L R +  + K   F+FHPKC R+ L  L FADDLL+F  
Sbjct: 642  KGL-RQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFAR 700

Query: 843  GDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRYL 1022
             D  S+  +   F  FSKAS L  +  K+ +Y GGV +E  +++   +    G LPFRYL
Sbjct: 701  ADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYL 760

Query: 1023 GVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            GVPL++K+++  QCK L+DK+ +R + W    LSYA R  L+K +L+S+  +W Q+F
Sbjct: 761  GVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIF 817


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  283 bits (724), Expect = 1e-73
 Identities = 148/356 (41%), Positives = 228/356 (64%), Gaps = 4/356 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D FNA FFKK+W  I +++   + + F +  M + INC  VTL+PKV H + ++ FRP+ 
Sbjct: 459  DGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIA 518

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             C+++YK+ISK+LT R++G +   ++++Q+ F+PGR I DNIL++ ELI  Y +K +S R
Sbjct: 519  CCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPR 578

Query: 498  CMLKLDLQKAYDSME*VFLQQV-HCLEFISRICG-VDHDVYTDSVLFYYAKWTTNSYLLM 671
            C++K+D++KAYDS+E  FL+ + +   F SR  G +   V T S         T  +   
Sbjct: 579  CIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQAR 638

Query: 672  *--RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFYTG 845
               R+GDP+SP+LF + M++L R L++L    +F+FHPKC RLN+  L FADDLL+F   
Sbjct: 639  KGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRA 698

Query: 846  DVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRYLG 1025
            D  S+  +   FQ+FS AS L  +  K+++Y  GV +E  +E+   +    G LPFRYLG
Sbjct: 699  DKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLG 758

Query: 1026 VPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            VPL++K+++  QCK L++ + +R +TW  + LSYA R  LIK +L S+  +WA +F
Sbjct: 759  VPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIF 814


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  239 bits (609), Expect = 2e-60
 Identities = 128/263 (48%), Positives = 176/263 (66%), Gaps = 7/263 (2%)
 Frame = +3

Query: 138 DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
           D +N  FFK +WNIIG  V +A+LD F++  M K INCT +TL+PK  + +S++ FRP+ 
Sbjct: 142 DGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIA 201

Query: 318 *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
            CS++YK+ISK+LT R+QG ++  + ++Q+AFV GRVI DNI++SHEL++ Y +KGIS R
Sbjct: 202 CCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPR 261

Query: 498 CMLKLDLQKAYDSME*VFLQQV-----HCLEFISRICGVDHDVYTDSVLFYYAKWTTNSY 662
           CM+K+DLQKAY+S+E  F++ +        +F++ + G    + T S  F      T  +
Sbjct: 262 CMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGC---LTTASYTFNINGDLTRPF 318

Query: 663 LLM--*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLF 836
                 R+GDP+SPYLFVI M++L   L QL K A F FHP+C RLNLI + F DDLLLF
Sbjct: 319 AAKKGLRQGDPISPYLFVICMEYLNICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLF 378

Query: 837 YTGDVQSVQLLFHRFQQFSKASE 905
             GDV SV  LF  F  FS ASE
Sbjct: 379 SRGDVDSVSQLFEAFSLFSAASE 401


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  238 bits (608), Expect = 3e-60
 Identities = 128/283 (45%), Positives = 188/283 (66%), Gaps = 15/283 (5%)
 Frame = +3

Query: 390  IDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVRCMLKLDLQKAYDSME*VFLQQV-- 563
            I DSQA F+PGR I DNI+++HEL++ Y +K +S RCMLK+DL KAYDS+E  FL+QV  
Sbjct: 351  ISDSQAGFIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFLEQVME 410

Query: 564  -------------HCLEFISRICGVDHDVYTDSVLFYYAKWTTNSYLLM*RKGDPLSPYL 704
                          C++ ++    V+     ++  F  AK          R+GDP+SP+L
Sbjct: 411  GLGFPDLFTKWVMKCVKTVNYTIVVNGQ---NTQRFDAAKGL--------RQGDPMSPFL 459

Query: 705  FVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFYTGDVQSVQLLFHRFQ 884
            F I M++L RLLK L +  +F +HPK ++L++  L FADDLLLF  GD+ S++ L   F 
Sbjct: 460  FAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFT 519

Query: 885  QFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRYLGVPLSTKRISIVQC 1064
            +FS+AS L  N +K+S+YCGGV  E++Q+I++ LG++   LPF+YLGVPLS+K+++ +Q 
Sbjct: 520  EFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQW 579

Query: 1065 KSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
              L++K+++RI +WT + LSYA RA L+K VLF +   WAQLF
Sbjct: 580  YPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLF 622


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  237 bits (605), Expect = 7e-60
 Identities = 138/359 (38%), Positives = 210/359 (58%), Gaps = 7/359 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D + + FFK  W IIG + + A+   F    + K IN T + LIPK      ++ +RP+ 
Sbjct: 474  DGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPIS 533

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             C++LYK+ISK++  RL+  +   I  +Q+AFV  R++ +N+L++ EL+++Y K  IS R
Sbjct: 534  CCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTR 593

Query: 498  CMLKLDLQKAYDSME*VFLQQVHCL-----EFIS--RICGVDHDVYTDSVLFYYAKWTTN 656
            C +K+D+ KA+DS++  FL  V  +     EFI    IC +    ++  V    A +  +
Sbjct: 594  CAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINIC-ITTASFSVQVNGELAGYFQS 652

Query: 657  SYLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLF 836
            S  L  R+G  LSPYLFVI M  L ++L +     +F +HPKC  + L  L FADDL++ 
Sbjct: 653  SRGL--RQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVL 710

Query: 837  YTGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFR 1016
              G ++S++ +   F +F+K S L  +  K++VY  G+S   + E+     FS G LP R
Sbjct: 711  SDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVR 770

Query: 1017 YLGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            YLG+PL TKR+S   C  LL+++  RI +WT+R+LSYA R  LI  VL+SI  FW   F
Sbjct: 771  YLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAF 829


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  236 bits (601), Expect = 2e-59
 Identities = 132/355 (37%), Positives = 200/355 (56%), Gaps = 6/355 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKV-SEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPL 314
            D FN  FF+KAW +IG  V + A+ + F   ++   +N T +TL+PKV +P+++  FRP+
Sbjct: 294  DGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIITLVPKVANPTTMSDFRPI 353

Query: 315  L*CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISV 494
              C+  YK+I+K+L  RL+G +   +  SQ+ F+PGR I DNIL++ E+I +Y K     
Sbjct: 354  SCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQP 413

Query: 495  RCMLKLDLQKAYDSME*VF-LQQVHCLEFISRICGVDHDVYTDSVLFYYAKWTTNSYLLM 671
            RC   +D+ KA D++E  F +  +      S + G      + +            +   
Sbjct: 414  RCTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFAR 473

Query: 672  ---*RKGDPLSPYLFVILMKHLERLL-KQLGKLANFHFHPKCSRLNLIQLGFADDLLLFY 839
                R+GDPLSPYLFVI M+ L   + +++     F +H +C +LNL  L FADDLL+F 
Sbjct: 474  RRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFC 533

Query: 840  TGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRY 1019
             GD  SV+ L   F  F   S L  N S++ ++  GV       +L+V  FS G  P RY
Sbjct: 534  NGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRY 593

Query: 1020 LGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWA 1184
            LG+PL T ++ +  C  LLD++ +RIK+W  + LS+A R  LI+ VL SI ++WA
Sbjct: 594  LGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWA 648


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  234 bits (598), Expect = 4e-59
 Identities = 135/363 (37%), Positives = 204/363 (56%), Gaps = 11/363 (3%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D + + F+K  W+IIG++ +  +   FQ   + K IN   + LIPK      +R +RP+ 
Sbjct: 121  DGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPIS 180

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             C++LYK+ISK++  RL+  +   I ++Q+AFV  R++ +N+L++ EL+++Y K  IS R
Sbjct: 181  CCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISAR 240

Query: 498  CMLKLDLQKAYDSME*VFLQQ-----------VHCLEFISRICGVDHDVYTDSVLFYYAK 644
            C +K+D+ KA+DS++  FL             +H +            V  D V ++ +K
Sbjct: 241  CAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSK 300

Query: 645  WTTNSYLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADD 824
                      R+G  LSPYLFVI M  L ++L +   +  F FHPKC RL L  L FADD
Sbjct: 301  RGL-------RQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADD 353

Query: 825  LLLFYTGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGI 1004
            L++   G  +S++ +   F +F K S L  +  K+++Y  GVS  I+QEI     F  G 
Sbjct: 354  LMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQ 413

Query: 1005 LPFRYLGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWA 1184
            LP RYLG+PL TKR++      LL+++  RI TWT R+ S+A R  LIK VL+SI  FW 
Sbjct: 414  LPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWL 473

Query: 1185 QLF 1193
              F
Sbjct: 474  AAF 476


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  225 bits (573), Expect = 3e-56
 Identities = 129/361 (35%), Positives = 205/361 (56%), Gaps = 9/361 (2%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D + + FFKK W+I+G  +  A+ + F+S  +    N T+VT++PK P+   I  FRP+ 
Sbjct: 467  DGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPIS 526

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             C+ +YK+ISK+L +RL+  +   I  SQ+AFV GR++T+N+L++ EL++ +G+  IS R
Sbjct: 527  CCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSR 586

Query: 498  CMLKLDLQKAYDSME*VFLQQV--------HCLEFISR-ICGVDHDVYTDSVLFYYAKWT 650
             +LK+DL+KA+DS+   F+ +           + +I + I      +     L  Y K +
Sbjct: 587  GVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGS 646

Query: 651  TNSYLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLL 830
                    R+GDPLSP LFVI M+ L RLL+      +  +HPK S + +  L FADDL+
Sbjct: 647  KGL-----RQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLM 701

Query: 831  LFYTGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILP 1010
            +FY G   S++ +    + F   S L  N+ K++VY  G+ +  +++ L   GF  G  P
Sbjct: 702  IFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTL-AFGFVNGTFP 760

Query: 1011 FRYLGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQL 1190
            FRYLG+PL  +++       L+DK+ +R   W T+ LS+A R  LI  V++S   FW   
Sbjct: 761  FRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSS 820

Query: 1191 F 1193
            F
Sbjct: 821  F 821


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  224 bits (571), Expect = 6e-56
 Identities = 123/352 (34%), Positives = 205/352 (58%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D +   FF++ W++IG++V+ A+   F    + K +N T + LIPK  +   ++ +RP+ 
Sbjct: 740  DGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKDYRPIS 799

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             C++LYK ISK+L  RL+  +   I  +Q+AF+  R++ +N+L++ EL+++Y K G+S R
Sbjct: 800  CCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPR 859

Query: 498  CMLKLDLQKAYDSME*VFLQQVHCLEFISRICGVDHDVYTDSVLFYYAKWTTNSYLLM*R 677
            C +K+DL KA+DS++  FL     L  ++ +   +  ++  ++    A ++     L  R
Sbjct: 860  CAMKIDLSKAFDSVQWPFL-----LNTLAALDIPEKFIHWINLCISTASFSVQVNGL--R 912

Query: 678  KGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFYTGDVQS 857
            +G  LSPYLFVI M  L  +L +      F +HP+C  + L  L FADD+++F  G   S
Sbjct: 913  QGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHS 972

Query: 858  VQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRYLGVPLS 1037
            ++ +   F+ F+  S L  +  K++++   +S+E    IL    F  G LP RYLG+PL 
Sbjct: 973  LEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLM 1032

Query: 1038 TKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            TKR+++  C  LL+K+ SRI +W  R+LSYA R  L+  V+ S+  FW   F
Sbjct: 1033 TKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAF 1084


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  222 bits (566), Expect = 2e-55
 Identities = 129/358 (36%), Positives = 203/358 (56%), Gaps = 6/358 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D + + FFK  W+I G+    A+   F    + K +N T + LIPK    + +R +RP+ 
Sbjct: 47   DGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPIS 106

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             C+++YK+ISK++  RL+  +   I  +Q+AFV  R++ +N+L++ EL+++Y K  IS R
Sbjct: 107  CCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPR 166

Query: 498  CMLKLDLQKAYDSME*VFL-QQVHCLEFISRICG-----VDHDVYTDSVLFYYAKWTTNS 659
            C +K+D+ KA+DS++  FL   +  L F    C      +    ++  V    A +  + 
Sbjct: 167  CAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSK 226

Query: 660  YLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFY 839
              L  R+G  LSPYLFVI M  L  ++       N  +HPKC +L+L  L FADDL++F 
Sbjct: 227  RGL--RQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFI 284

Query: 840  TGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRY 1019
             G  +SV+ + + F++F+  S L  +  K+++Y  GVS   +  IL    F+ G LP RY
Sbjct: 285  DGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRY 344

Query: 1020 LGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            LG+PL TK+++      LLDK+ S+I +WT R LSYA R  LI  V+ S+  FW   +
Sbjct: 345  LGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAY 402


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  219 bits (559), Expect = 1e-54
 Identities = 128/358 (35%), Positives = 207/358 (57%), Gaps = 6/358 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D F A FF  +W+I+G +V++A+ + F S  + K  N T++ LIPK+ +P+    FRP+ 
Sbjct: 468  DGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPIS 527

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
              + LYK+I+++LT RLQ  +S  I  +Q+AF+PGR + +N+L++ +L+  Y    IS R
Sbjct: 528  CLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPR 587

Query: 498  CMLKLDLQKAYDSME*VF-LQQVHCL----EFISRICG-VDHDVYTDSVLFYYAKWTTNS 659
             MLK+DL+KA+DS+   F +  +  L    +FI+ I   +    +T S+      +  ++
Sbjct: 588  GMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKST 647

Query: 660  YLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFY 839
              L  R+GDPLSPYLFV+ M+    LL    +    H+HPK S L++  L FADD+++F+
Sbjct: 648  KGL--RQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFF 705

Query: 840  TGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRY 1019
             G   S+  +      F+  S L  N  K+ +Y  G+ N+++       GF  G LP RY
Sbjct: 706  DGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGL-NQLESNANAAYGFPIGTLPIRY 764

Query: 1020 LGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            LG+PL  +++ I + + LL+K+ +R ++W  + LS+A R  LI  V+F    FW   F
Sbjct: 765  LGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTF 822


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  218 bits (556), Expect = 3e-54
 Identities = 126/357 (35%), Positives = 197/357 (55%), Gaps = 5/357 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D ++  FF+  W+IIG +V  A+ + F S  + K  N T++ LIPK  +  +I  FRP+ 
Sbjct: 328  DGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPIS 387

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
              + LYK+ISK+LT RLQG +S  I  SQ+AF+PGR + +N+L++ E++  Y +  IS R
Sbjct: 388  CLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPR 447

Query: 498  CMLKLDLQKAYDSME*VFL-QQVHCLEFISRICGVDHDVYTDSVLFYYAKWTTNSYLLM- 671
             MLK+DL+KA+DS++  F+   +  L    R     H   T           T  +    
Sbjct: 448  GMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRST 507

Query: 672  --*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFYTG 845
               R+GDPLSPYLFV+ M+   +LL         H+HPK   L++  L FADD+++F+ G
Sbjct: 508  KGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDG 567

Query: 846  DVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILK-VLGFSKGILPFRYL 1022
               S+  +      F+  S L  N  K+ ++  G+  ++ + I     GF  G  P RYL
Sbjct: 568  GSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL--DLSERITSAAYGFPAGTFPIRYL 625

Query: 1023 GVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            G+PL  +++ I     LL+K+ +R+++W ++ LS+A R  LI  V+F +  FW   F
Sbjct: 626  GLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTF 682


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  218 bits (556), Expect = 3e-54
 Identities = 126/357 (35%), Positives = 197/357 (55%), Gaps = 5/357 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D ++  FF+  W+IIG +V  A+ + F S  + K  N T++ LIPK  +  +I  FRP+ 
Sbjct: 328  DGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPIS 387

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
              + LYK+ISK+LT RLQG +S  I  SQ+AF+PGR + +N+L++ E++  Y +  IS R
Sbjct: 388  CLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPR 447

Query: 498  CMLKLDLQKAYDSME*VFL-QQVHCLEFISRICGVDHDVYTDSVLFYYAKWTTNSYLLM- 671
             MLK+DL+KA+DS++  F+   +  L    R     H   T           T  +    
Sbjct: 448  GMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRST 507

Query: 672  --*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFYTG 845
               R+GDPLSPYLFV+ M+   +LL         H+HPK   L++  L FADD+++F+ G
Sbjct: 508  KGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDG 567

Query: 846  DVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILK-VLGFSKGILPFRYL 1022
               S+  +      F+  S L  N  K+ ++  G+  ++ + I     GF  G  P RYL
Sbjct: 568  GSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL--DLSERITSAAYGFPAGTFPIRYL 625

Query: 1023 GVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            G+PL  +++ I     LL+K+ +R+++W ++ LS+A R  LI  V+F +  FW   F
Sbjct: 626  GLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTF 682


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  213 bits (543), Expect = 1e-52
 Identities = 127/360 (35%), Positives = 207/360 (57%), Gaps = 8/360 (2%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D F+  FF   W IIG +V+EA+ + F S  + K  N T++ LIPK+ + SS+  FRP+ 
Sbjct: 365  DGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPIS 424

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
              + +YK+ISK+LT RL+  +   I  SQ+AF+PGR+  +N+L++ EL+  Y KK I+  
Sbjct: 425  CLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPS 484

Query: 498  CMLKLDLQKAYDSME*VFL-QQVHCLEFISRI-CGVDHDVYTDS---VLFYYAK---WTT 653
             MLK+DL+KA+DS+   F+   +  L    +  C +   + T S   +L  ++    W++
Sbjct: 485  SMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSS 544

Query: 654  NSYLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLL 833
                   R+GDP+SPYLFV+ M+    LL+         +HPK S+L +  L FADD+++
Sbjct: 545  KGL----RQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMI 600

Query: 834  FYTGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPF 1013
            F+ G   S+  +    + F+  S L  N++K  +Y  G+S + + + +   GF  G LP 
Sbjct: 601  FFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLS-QSESDSMASYGFKLGSLPV 659

Query: 1014 RYLGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            RYLG+PL +++++I +   L++K+ +R  +W  R LS+A R  L+  V+  I  FW   F
Sbjct: 660  RYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSF 719


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  211 bits (538), Expect = 4e-52
 Identities = 124/359 (34%), Positives = 206/359 (57%), Gaps = 7/359 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D F + FFK++W I+G +   A+   F    + K +N T + LIPK      ++ +RP+ 
Sbjct: 27   DGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPIS 86

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             C+++YK+ISK+L  RL+  +   I  +Q++FV  R++ +N+L++ +L+++Y K  IS R
Sbjct: 87   CCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISER 146

Query: 498  CMLKLDLQKAYDSME*VFL----QQVHCLEFIS---RICGVDHDVYTDSVLFYYAKWTTN 656
            C +K+D+ KA DS++  FL      +H  E      R+C +    ++  V    A +  +
Sbjct: 147  CAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLC-ITTPSFSVQVNGELAGFFQS 205

Query: 657  SYLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLF 836
            S  L  R+G  LSPYLFVI M  L +LL ++  +    +HP C R+ L  L FADDL++ 
Sbjct: 206  SRGL--RQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMIL 263

Query: 837  YTGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFR 1016
              G  +S++ +   F  FSK S L  +  K++++  G+S+  + ++     F  G LP R
Sbjct: 264  TDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIR 323

Query: 1017 YLGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            YLG+PL TKR+S V    L++++  RI +W++R+LS+A R  LI  +++S   FW   F
Sbjct: 324  YLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAF 382


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  210 bits (534), Expect = 1e-51
 Identities = 121/361 (33%), Positives = 206/361 (57%), Gaps = 9/361 (2%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D + + FFK  W++ G     A+   F    + K +N T + LIPK      ++ +RP+ 
Sbjct: 771  DGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPIS 830

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
             C++LYK+ISK+L  RL+  +   I  +Q+AFV  R++ +N+L++ EL+++Y K+ ++ R
Sbjct: 831  CCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPR 890

Query: 498  CMLKLDLQKAYDSME*VFLQQVHCLEFIS---------RICGVDHDVYTDSVLFYYAKWT 650
            C +K+D+ KA+DS++  FL  ++ LE ++         ++C +    ++  V    A + 
Sbjct: 891  CAMKIDISKAFDSVQWQFL--LNTLEALNFPETFRHWIKLC-ISTATFSVQVNGELAGFF 947

Query: 651  TNSYLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLL 830
             +S  L  R+G  LSPYLFVI M  L  ++ +     N  +HPKC ++ L  L FADDL+
Sbjct: 948  GSSRGL--RQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLM 1005

Query: 831  LFYTGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILP 1010
            +F  G   S++ + + F++F+  S L  +  K+++Y  GVS   + + L    F+ G LP
Sbjct: 1006 VFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLP 1065

Query: 1011 FRYLGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQL 1190
             RYLG+PL TK+++      L++ + ++I +WT R LSYA R  L+  V+ SI  FW   
Sbjct: 1066 VRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSA 1125

Query: 1191 F 1193
            +
Sbjct: 1126 Y 1126


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  209 bits (532), Expect = 2e-51
 Identities = 122/359 (33%), Positives = 207/359 (57%), Gaps = 7/359 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D +++ FFK  W ++G +V+EA+ + F+S  + K  N T++ LIPK+ + S +  FRP+ 
Sbjct: 469  DGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPIS 528

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
              + LYK+I+K+LT RL+  ++  I  SQ+AF+PGR++++N+L++ E++  Y  K IS R
Sbjct: 529  CLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSR 588

Query: 498  CMLKLDLQKAYDSME*VFLQQVHCLEFISR--ICGVDHDVYTD--SVLFYYAK---WTTN 656
             MLK+DL+KA+DS+   F+        +    +C ++  + T   SV+   +    + +N
Sbjct: 589  GMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSN 648

Query: 657  SYLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLF 836
              L   R+GDPLSPYLFV+ M+    LLK        H+HPK + L++  L FADD+++F
Sbjct: 649  KGL---RQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVF 705

Query: 837  YTGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFR 1016
            + G   S+  +      F+  S L  N  K ++Y  G ++E++   +   GF    LP R
Sbjct: 706  FDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAG-TDEVEALAISHYGFPISTLPIR 764

Query: 1017 YLGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            YLG+PL ++++ I +      +++ R ++W  + LS+A R  LI  V+  +  FW   F
Sbjct: 765  YLGLPLMSRKLKISEY-----ELVKRFRSWAVKSLSFAGRVQLITSVITGLVNFWMSTF 818


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  206 bits (524), Expect = 2e-50
 Identities = 121/359 (33%), Positives = 206/359 (57%), Gaps = 7/359 (1%)
 Frame = +3

Query: 138  DDFNALFFKKAWNIIGKKVSEAMLDIFQSKTMSKTINCTSVTLIPKVPHPSSIRGFRPLL 317
            D +++ FFK  W ++G +V+EA+ + F+S  + K  N T++ LIPK+ + S +  FRP+ 
Sbjct: 469  DGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPIS 528

Query: 318  *CSILYKLISKVLTKRLQGDMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVR 497
              + LYK+I+K+LT RL+  ++  I  SQ+AF+PGR++++N+L++ E++  Y  K IS R
Sbjct: 529  CLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSR 588

Query: 498  CMLKLDLQKAYDSME*VFLQQVHCLEFISR--ICGVDHDVYTD--SVLFYYAK---WTTN 656
             MLK+DL+KA+DS+   F+        +    +C ++  + T   SV+   +    + +N
Sbjct: 589  GMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSN 648

Query: 657  SYLLM*RKGDPLSPYLFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLF 836
              L   R+GDPLSPYLFV+ M+    LLK         +HPK + L++  L FADD+++F
Sbjct: 649  KGL---RQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVF 705

Query: 837  YTGDVQSVQLLFHRFQQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFR 1016
            + G   S+  +      F+  S L  N  K ++Y  G ++E++   +   GF    LP R
Sbjct: 706  FDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAG-TDEVEALAISHYGFPISTLPIR 764

Query: 1017 YLGVPLSTKRISIVQCKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
            YLG+PL ++++ I +      +++ R ++W  + LS+A R  LI  V+  +  FW   F
Sbjct: 765  YLGLPLMSRKLKISEY-----ELVKRFRSWAVKSLSFAGRVQLITSVITGLVNFWMSTF 818


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  201 bits (511), Expect = 5e-49
 Identities = 123/344 (35%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
 Frame = +3

Query: 210  DIFQSKTMSKTINCTSVTLIPKVPHPSSIRG-----FRPLL*CSILYKLISKVLTKRLQG 374
            D+ Q+ T       TS   I  +P  SS  G     +RPL  C+++YK+ISK++  RL+ 
Sbjct: 20   DLTQTSTCIVVFMLTSYICIHFLPLLSSPTGHFISHYRPLSCCNVIYKIISKIIANRLKM 79

Query: 375  DMSYTIDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVRCMLKLDLQKAYDSME*VFL 554
             +   I  +Q AFV  R++ +N+L++ EL+++Y K+ +S RC +K+D+ KA++S++  F+
Sbjct: 80   VLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFI 139

Query: 555  QQ-----------VHCLEFISRICGVDHDVYTDSVLFYYAKWTTNSYLLM*RKGDPLSPY 701
            +            VH +            V  + V F+ +K          R+G  LSPY
Sbjct: 140  RNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGL-------RQGCSLSPY 192

Query: 702  LFVILMKHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFYTGDVQSVQLLFHRF 881
            LFV+ M  L +LL Q      F +H +C  L+L  L FADDL++   G V+S+  +   F
Sbjct: 193  LFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVF 252

Query: 882  QQFSKASELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRYLGVPLSTKRISIVQ 1061
              F+K S L  +  K+++Y  GV+ ++  EI     F  G LP RYLG+PL TKR++   
Sbjct: 253  DIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATD 312

Query: 1062 CKSLLDKMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQLF 1193
               LL+ +  +I TWTTRYLSYA R  LI  VL+SI  FW   F
Sbjct: 313  YSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAF 356


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  200 bits (509), Expect = 9e-49
 Identities = 106/276 (38%), Positives = 172/276 (62%), Gaps = 10/276 (3%)
 Frame = +3

Query: 390  IDDSQAAFVPGRVITDNILVSHELIEEYGKKGISVRCMLKLDLQKAYDSME*VFLQQVHC 569
            +  +QAAFVPG+ + D+++++ EL+  Y +K  + +CML++D+QKAYD++          
Sbjct: 371  VGKNQAAFVPGQQLHDHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVH------WDA 424

Query: 570  LEFISRICGVDHD------VYTDSVLFYY---AKWTTNSYLLM*-RKGDPLSPYLFVILM 719
            LE I R  G          +   SV + +    ++T         R+GDP+SP LF+++M
Sbjct: 425  LEHILRELGFPDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVM 484

Query: 720  KHLERLLKQLGKLANFHFHPKCSRLNLIQLGFADDLLLFYTGDVQSVQLLFHRFQQFSKA 899
            ++L R+L QL K+ NF++H KC ++ +  L FADDLLLF  GD+ SVQ++  +F  F ++
Sbjct: 485  EYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRS 544

Query: 900  SELTTNSSKNSVYCGGVSNEIQQEILKVLGFSKGILPFRYLGVPLSTKRISIVQCKSLLD 1079
              L  N SK ++YCG V   +++++L + GF +G +PFRYLG+PLS+K+++I   + L+D
Sbjct: 545  MGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLID 604

Query: 1080 KMLSRIKTWTTRYLSYAFRA*LIKFVLFSIHIFWAQ 1187
            K++ RI  W+   LSYA R  LI+ V+F+   FW Q
Sbjct: 605  KIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQ 640