BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040665
         (992 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...   116   3e-33
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...   116   1e-26
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...   110   2e-24
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...   103   4e-23
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...    91   3e-20
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    81   4e-15
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253...    78   8e-13
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...    79   4e-12
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    62   5e-12
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    75   5e-11
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    64   6e-11
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    73   2e-10
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...    68   2e-10
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...    72   4e-10
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    69   6e-10
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A...    71   7e-10
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...    69   3e-09
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    67   1e-08
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...    67   1e-08
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...    63   8e-08

>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score =  116 bits (290), Expect(3) = 3e-33
 Identities = 59/158 (37%), Positives = 99/158 (62%), Gaps = 3/158 (1%)
 Frame = -3

Query: 987  LQQLIVKWWQAPVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSGGRVIYQVFAKIQR 808
            LQQLI+ WW+     +L+ I++A+PAII+  LWKRRN +KH    S  R++  V   +++
Sbjct: 604  LQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSISWERMVEMVIEVVRK 663

Query: 807  LVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPGRS 637
            +V+ +   I+ +      +++ +   + ++++ +V WK P    +  NTDGA   +PG S
Sbjct: 664  MVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVKSNTDGACRGNPGLS 723

Query: 636  AYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEAL 523
            ++ FC+RD +G LI+A+++ IG ATN EAE +AI  AL
Sbjct: 724  SFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTAL 761



 Score = 41.2 bits (95), Expect(3) = 3e-33
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -2

Query: 514 RFNNIIFQTDSKMVQKILSEGWKPPWNIAIWVDEAKEISSNMKVIFT 374
           +   +I +TDS  ++KI+ + W+ PW IA  V+E +EI   +K   T
Sbjct: 768 KMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKIT 814



 Score = 32.7 bits (73), Expect(3) = 3e-33
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = -1

Query: 329 KRRILNSDKSQVPYLRIRTK 270
           +RRILN DK+Q+P LRIRT+
Sbjct: 850 ERRILNIDKAQIPTLRIRTR 869


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score =  116 bits (291), Expect(2) = 1e-26
 Identities = 61/160 (38%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
 Frame = -3

Query: 987  LQQLIVKWWQAPVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSGGRVIYQVFAKIQR 808
            LQQLI KWW    + +L QI +AV A+I+ ELWKRRN  +HG++ +   + YQ    + +
Sbjct: 575  LQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTYNNMYYQCQLILYQ 634

Query: 807  LVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGASPGR---S 637
            LV I+   I+ +     ++V +++  +  L+   V W+ P    + CNTDGAS G    S
Sbjct: 635  LVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMS 694

Query: 636  AYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNF 517
            +Y +C+RD  G L++A++ +IG  TN EAE   + +AL F
Sbjct: 695  SYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQF 734



 Score = 31.2 bits (69), Expect(2) = 1e-26
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -2

Query: 493 QTDSKMVQKILSEGWKPPWNIAIWVDEAKEISSNMKV 383
           +TDS  +Q +++  WK PW +   ++E  EI   + V
Sbjct: 746 ETDSLALQNMITRSWKIPWELVEKLEEIHEIMQQIDV 782


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score =  110 bits (274), Expect(2) = 2e-24
 Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 3/159 (1%)
 Frame = -3

Query: 990 QLQQLIVKWWQAPVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSGGRVIYQVFAKIQ 811
           QL Q+++KWW +     LK + + VP +++  LWKRRN +KHG   S   ++Y+V + + 
Sbjct: 63  QLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSYNNLVYRVNSDLW 122

Query: 810 RLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGAS---PGR 640
           +L +     ++  P +  ++V  +E  + +L    V WK PP   L CNTD AS   P  
Sbjct: 123 KLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTCNTDVASRCNPEI 181

Query: 639 SAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEAL 523
           S+Y FCLR+S G L++ Q ++I   TN E E +AI E L
Sbjct: 182 SSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAIREDL 220



 Score = 30.4 bits (67), Expect(2) = 2e-24
 Identities = 10/27 (37%), Positives = 21/27 (77%)
 Frame = -2

Query: 493 QTDSKMVQKILSEGWKPPWNIAIWVDE 413
           +TDS+++ KIL+  W+ PW+I + +++
Sbjct: 234 ETDSQVLIKILTRIWEVPWSIVVIIED 260


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score =  103 bits (257), Expect(2) = 4e-23
 Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
 Frame = -3

Query: 990 QLQQLIVKWWQAPVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSGGRVIYQVFAKIQ 811
           QL+  I KWW A  + +L+ +  A+P  IL E WK RN +KHG K S   ++ ++   I 
Sbjct: 34  QLKDTIFKWWNANCSAKLRPLFNAIPGFILWESWKGRNTVKHGGKISRYNMLAEITRNIH 93

Query: 810 RLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLF-CNTDGASPGR-- 640
            L  +R   +R IP     +VK  E   + L  TKV++ +PP   ++ CNTD AS G   
Sbjct: 94  NLAMVRYPWLRNIPKDWSMMVKFFENYISVL-ATKVIYWVPPNMGVYKCNTDCASKGNPR 152

Query: 639 -SAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNFLDSTTL 499
            SA  FC+R+  G  I+  S+++G  T+ EAE+IA    L F  S  L
Sbjct: 153 PSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSHNL 200



 Score = 32.3 bits (72), Expect(2) = 4e-23
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 502 IIFQTDSKMVQKILSEGWKPPWNIAIWV 419
           +I +TDS +V KIL   W+ PW+I++ +
Sbjct: 203 VILETDSLIVSKILDGIWETPWSISLLI 230


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score = 90.9 bits (224), Expect(2) = 3e-20
 Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
 Frame = -3

Query: 843  RVIYQVFAKIQRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCN 664
            +++YQV   + +  +    S+++ P    ++VK +E  + ++   K++W  P  +   CN
Sbjct: 686  KLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYYKKIIWMPPNSNTRKCN 745

Query: 663  TDGAS---PGRSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNFLDSTTLFS 493
            TDGAS   PG+S+Y +CLRD EG LI+AQ+E+I   TN EAE +AI EA+ +  +T  FS
Sbjct: 746  TDGASKGNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAI-YHCTTRGFS 804

Query: 492  RQT 484
            R T
Sbjct: 805  RVT 807



 Score = 35.0 bits (79), Expect(2) = 3e-20
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 511 FNNIIFQTDSKMVQKILSEGWKPPWNIAIWVDE 413
           F+ +  +TDS +++ IL   W+ PWNI I V++
Sbjct: 803 FSRVTIETDSLLLKNILQGNWEIPWNIRIIVED 835


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 80.9 bits (198), Expect(2) = 4e-15
 Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
 Frame = -3

Query: 987  LQQLIVKWWQAPVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSGGRVIYQVFAKIQR 808
            LQQLI+ WW+   N +LK + +A+P II+  LWKRRN  KH    +   V+ QV  +   
Sbjct: 981  LQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFKHRGTTTYSEVVMQVQEE--- 1037

Query: 807  LVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGASPGRS--- 637
                                   + GR ++                CNTDGA+ G S   
Sbjct: 1038 -----------------------KPGRNKVK---------------CNTDGAARGNSGAS 1059

Query: 636  AYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEAL 523
            +  F +RD EG LI+A+++ IG ATN EAE +A+ EA+
Sbjct: 1060 STSFVVRDEEGDLIYARAKGIGIATNMEAEALALLEAV 1097



 Score = 27.7 bits (60), Expect(2) = 4e-15
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 499  IFQTDSKMVQKILSEGWKPPWNI 431
            I +TDS +++K++   WK PW +
Sbjct: 1109 IIETDSLVLKKMVDNQWKIPWEL 1131


>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
            lycopersicum]
          Length = 13995

 Score = 78.2 bits (191), Expect(2) = 8e-13
 Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
 Frame = -3

Query: 852  SGGRVIYQVFAKIQRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCL 673
            S  R+I+Q+ A    L++ R  S + +P     +V+ +     +  +TKV+WK P    +
Sbjct: 3122 SSSRLIFQIIAYSGLLIKTRRRSRKHVPYNWRIVVEALNNYNLKAKVTKVIWKAPDTGQI 3181

Query: 672  FCNTDGASPGRSAYEFCLRDSEGGLIHAQSEDIG--TATNTEAEIIAITEALNFLDSTTL 499
               TD   P RS++ FC+RD +G ++ AQ+++IG    TNT+AE +AI +AL F+++T +
Sbjct: 3182 KIKTD---PRRSSWVFCVRDEQGDILQAQAQEIGELACTNTQAEAMAILQALKFIEATQM 3238



 Score = 22.7 bits (47), Expect(2) = 8e-13
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -2

Query: 523  EFFRFNNIIFQTDSKMVQKILSEGWK 446
            E  + + ++ +TDS +   I+ + WK
Sbjct: 3234 EATQMDRVVIKTDSLLTNNIVDKSWK 3259


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
 Frame = -3

Query: 987  LQQLIVKWWQAPVNERL-KQIHQAVPAIIL*ELWKRRNCIKHGEKR-SGGRVIYQVFAKI 814
            L+ L++ W   PV+ ++ K ++Q +P  I   LWK R  +KHG K+ S  RV Y +F   
Sbjct: 736  LRSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWKNRCAVKHGSKQCSTQRVQYAIFKDT 795

Query: 813  QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPG 643
             + V +   +I R  N  D L+ + E  + Q+ +TKV+W+ P       NTDG+   +  
Sbjct: 796  MQAVMVAFPNISR-QNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNIN 854

Query: 642  RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNFLDSTTLFSRQTQRWFKRF 463
            +      LRD  G LI+A +   G  TN  AE+ A    L++ +         Q  +KR 
Sbjct: 855  KIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCE---------QHGYKRI 905

Query: 462  YLRVGNPHGTLLFGWM 415
             L V +    LL  W+
Sbjct: 906  ILEVDS---ELLSKWI 918


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 143

 Score = 61.6 bits (148), Expect(2) = 5e-12
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = -3

Query: 753 LVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGAS---PGRSAYEFCLRDSEGGLIHAQS 583
           +V +++  +  L    V WK P    + CNTDGAS   P +S+Y FC+R+  G L++A+ 
Sbjct: 1   MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEV 60

Query: 582 EDIGTATNTEAEIIAITEALNF 517
           + IG  TN +AE +AI +AL +
Sbjct: 61  QSIGVTTNMDAESMAIWKALQY 82



 Score = 37.0 bits (84), Expect(2) = 5e-12
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 511 FNNIIFQTDSKMVQKILSEGWKPPWNIAIWVDEAKEISSNMKV 383
           F  +  +TDS  ++ IL   WK PW +   V++  EI S+M V
Sbjct: 88  FQQVSLETDSLTLKNILVRNWKTPWELVERVEDILEIMSHMDV 130


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 198

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
 Frame = -3

Query: 753 LVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGAS---PGRSAYEFCLRDSEGGLIHAQS 583
           +++ +   +++L    V W  P  D + CNTDGAS   PG SAY +CLR+S G LIH  +
Sbjct: 1   MIRRLGANKSRLYHCTVRWDAPHEDVIKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTA 60

Query: 582 EDIGTATNTEAEIIAITEALNFL------------DSTTLFSRQTQRWFKRFYLRVGNPH 439
           E+IG  TN EAE+ AI EA+ +             DS  +     + W   + +      
Sbjct: 61  ENIGITTNVEAEMRAILEAIRYCVNKKMRKIILESDSLLMVKIINEAWKVLWVIAEE--- 117

Query: 438 GTLLFGWMKPRKSAAT*KSFSHNLKECNKLADALAN 331
               F  +K   +    K+  H  +E NKLAD LAN
Sbjct: 118 ----FDELKQEMTKIEVKT-QHIYREGNKLADYLAN 148


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score = 63.5 bits (153), Expect(2) = 6e-11
 Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
 Frame = -3

Query: 987 LQQLIVKWWQA-PVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
           L  LI +WW   P N   K + QA P  I   LWK R   K+G K +   RV Y ++   
Sbjct: 194 LPALIKQWWTTKPNNAGHKLLLQATPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDT 253

Query: 813 QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPG 643
            ++++    SI   P     L+   E     + + KV W  PP   +  NTDG+   + G
Sbjct: 254 FKMLKNSFPSI-NWPANWTTLILTSEKCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEG 312

Query: 642 RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIA 538
           +      +RD EG +I A S  +G  +N +AEI A
Sbjct: 313 KIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEA 347



 Score = 31.2 bits (69), Expect(2) = 6e-11
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 511 FNNIIFQTDSKMVQKILSEGWKPPWNIAIWVDEAKEI 401
           F NI+ + DS++V + +S    PPWN+   ++  ++I
Sbjct: 360 FKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQQI 396


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
 Frame = -3

Query: 987  LQQLIVKWWQAPVN-ERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSGGRVIYQVFAKIQ 811
            L+ +I++WW AP N E  K I  + P  I   LWK R  +K+G K+S         A+++
Sbjct: 973  LRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYGGKQSN-------IARVK 1025

Query: 810  RLVQIRNLSIRRI-------PNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDG- 655
             LV + N  +          P R ++   ++E       +T V W  PP   +  NTDG 
Sbjct: 1026 HLVILDNFKLLHTVFPYISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGS 1085

Query: 654  --ASPGRSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIA 538
              ++PG       +R+  G +I A S  +GT TN +AE+ A
Sbjct: 1086 ALSNPGSIGAGDVIRNHLGEIILAYSTPLGTGTNNQAEVEA 1126


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 67.8 bits (164), Expect(2) = 2e-10
 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
 Frame = -3

Query: 987 LQQLIVKWWQA-PVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
           LQ  + +WW A P NE  + + QA P  I   LWK R   K+G K +   RV Y V+   
Sbjct: 34  LQARVQQWWTARPQNEGHQLLLQATPTFICWNLWKNRCACKYGAKATNISRVKYAVYKDT 93

Query: 813 QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPG 643
            ++++I    I + P     L++  E  + ++ +  V W  PP   +  NTDG+   + G
Sbjct: 94  FKMLKIAFPHI-KWPASWTALIQTSEKCKHEIKVCMVAWNRPPEQWIKINTDGSALTNLG 152

Query: 642 RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNF 517
           +      LRD EG ++ A +  +G  +N +AE  A    L++
Sbjct: 153 QIGAGGILRDREGKMVLAFATPLGEGSNNKAETAAALFGLSW 194



 Score = 25.0 bits (53), Expect(2) = 2e-10
 Identities = 8/37 (21%), Positives = 22/37 (59%)
 Frame = -2

Query: 511 FNNIIFQTDSKMVQKILSEGWKPPWNIAIWVDEAKEI 401
           + NI+ + DS++V + +S+   P W++   ++  + +
Sbjct: 200 YRNILIELDSQLVVQWISKKTAPHWSVTKQIERIQHL 236


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 655

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
 Frame = -3

Query: 987 LQQLIVKWWQAPVNERL-KQIHQAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
           L+  ++ W    VN  + K +   +P +I   LWK R  +K+G+KRS   RV Y +F ++
Sbjct: 441 LRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWKNRCAVKYGKKRSNVHRVKYGIFKEV 500

Query: 813 QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPG 643
            +++++   SI    N  + LV I+E    Q  I  V W  P       NTDG+   + G
Sbjct: 501 MQIIKLVFPSIPWQANW-NNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSG 559

Query: 642 RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNFLDSTTLFSRQTQRWFKRF 463
           ++     LRD +G +++A S   G  TN  AEI A    + + +         Q  +K+ 
Sbjct: 560 KTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMQWCE---------QHGYKKV 610

Query: 462 YLRVGNPHGTLLFGWMK 412
            L V +    LLF W+K
Sbjct: 611 ELEVDS---ELLFNWIK 624


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score = 69.3 bits (168), Expect(2) = 6e-10
 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
 Frame = -3

Query: 987 LQQLIVKWWQAPVNERLKQIH-QAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
           LQ  + +WW A       Q+  QA P  +   LWK R   K+G K +   RV Y ++   
Sbjct: 42  LQARLRQWWSATATNAGHQLLLQATPTFVCWNLWKNRCACKYGGKATNISRVKYAIYKDT 101

Query: 813 QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGAS---PG 643
            +++Q     I+  P+    L +  E  +  + + KV W  PP + +  NTDG++   PG
Sbjct: 102 FKMLQNTFPHIKW-PSNWTALYQTSEKCKHDIKVCKVAWNRPPEEWIKINTDGSAINNPG 160

Query: 642 RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNF 517
           +      LRD+EG L+ A +  +G  +N +AE+ A    L++
Sbjct: 161 KIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEAAQFGLSW 202



 Score = 21.9 bits (45), Expect(2) = 6e-10
 Identities = 7/37 (18%), Positives = 24/37 (64%)
 Frame = -2

Query: 511 FNNIIFQTDSKMVQKILSEGWKPPWNIAIWVDEAKEI 401
           + NII + DS++V + +++     W+++  +++ +++
Sbjct: 208 YRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQL 244


>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 15/233 (6%)
 Frame = -3

Query: 987 LQQLIVKWWQA-PVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
           LQ  + KWW A P NE  + + QA P  I   LWK R   K+G K +   RV Y ++   
Sbjct: 34  LQARLEKWWTANPRNEGHQLLLQATPIFICWNLWKNRCASKYGGKATYISRVKYAIYKDN 93

Query: 813 QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPG 643
            ++++     I   P     L+   E  + ++ + KV W  PP + +  NTDG+   +PG
Sbjct: 94  FKMMKNAFPHI-NWPAHWTALITTSERCKHEIKVCKVTWNRPPEEWIKINTDGSALTNPG 152

Query: 642 RSAYEFCLRDSEGGLIHAQSEDIGTATN----TEAEIIAITEALNFLDSTTLFSRQTQ-- 481
           +      +RD +G LI A +  +G  +N    TEA +  + +AL       +    +Q  
Sbjct: 153 KIGAGGIIRDKDGKLILAFATSLGEGSNNKAETEAALFGLVKALELGFKNIIMELDSQLV 212

Query: 480 -RWFKR---FYLRVGNPHGTLLFGWMKPRKSAAT*KSFSHNLKECNKLADALA 334
             W  +    +  V N    + F  ++ +          H L+E N +AD+L+
Sbjct: 213 VHWINKKSAHHWSVANEIAKIQFLILQTQNFKC-----QHTLREANWVADSLS 260


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
 Frame = -3

Query: 987  LQQLIVKWWQAPVNERL-KQIHQAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
            L+  ++ W    VN  + K +   +P II   LWK R  +K+G+KRS   RV Y +F ++
Sbjct: 1059 LRAQLLHWRNQQVNNEVHKLLIHILPNIICWNLWKNRCAVKYGKKRSSIHRVKYGIFKEV 1118

Query: 813  QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPG 643
             +++++   SI    N  + LV I+E    Q  I  V W  P       NTDG+   + G
Sbjct: 1119 MQVIKLVFPSIPWQSNW-NNLVNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSG 1177

Query: 642  RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNFLDSTTLFSRQTQRWFKRF 463
            +      LRD +G +++A S   G  TN  AEI A    + + +         Q  +K+ 
Sbjct: 1178 KIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMEWCE---------QHGYKKV 1228

Query: 462  YLRVGNPHGTLLFGWMK 412
             L V   +  LL+ W+K
Sbjct: 1229 ELEV---NSELLYNWIK 1242


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 5/197 (2%)
 Frame = -3

Query: 987  LQQLIVKWWQAPVNERL-KQIHQAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
            L+  ++ W    VN  + K +   +P +I   LWK R  +K+G K S   RV Y +F  +
Sbjct: 987  LRDQLLHWRNQQVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSSIHRVQYGIFKDV 1046

Query: 813  QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPG 643
             ++++I   SI    +  ++L+ I+E  + Q  I  V W  P       NTDG+   + G
Sbjct: 1047 MQVIKIVFPSI-PWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSG 1105

Query: 642  RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNFLDSTTLFSRQTQRWFKRF 463
            +      LRD +G +++A S   G  TN  AEI A    L + D         Q  +KR 
Sbjct: 1106 KIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCD---------QHGYKRV 1156

Query: 462  YLRVGNPHGTLLFGWMK 412
             L V +    LL  W+K
Sbjct: 1157 ELEVDS---QLLCNWIK 1170


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 338

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
 Frame = -3

Query: 987 LQQLIVKWWQA-PVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
           LQ  + +WW A P NE  + + QA P  I+  LWK     K+G   +   RV Y V+   
Sbjct: 64  LQAKLRQWWTARPRNEGHQLLLQATPVFIVWNLWKNICACKYGGTSTNISRVKYAVYKDT 123

Query: 813 QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGAS---PG 643
            +++++    I   P     LV+  E  + ++ ++ V W  P    +  NTDG++   PG
Sbjct: 124 FKMLKMAFPHINW-PGSWAALVQKAENCKHEIQVSMVTWNRPSEQWIKINTDGSALTNPG 182

Query: 642 RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNF---LDSTTLFSRQTQRWF 472
           ++     LRD EG ++ A +  +G  TN  AE  A+   L++   L    +      +  
Sbjct: 183 QTGAGGILRDKEGKMVMAFATPLGEGTNNTAEAEAVLFGLSWALELGHRNIQIELDAQLV 242

Query: 471 KRFYLRVGNPHGTLLFGWMKPRKSAAT*KSF--SHNLKECNKLADALA 334
            ++  R   PH +++    + +      ++F  +H  +E N +ADAL+
Sbjct: 243 VKWITRKEVPHWSVINQIERIQHLIMQTQNFMCTHIFREANWVADALS 290


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 375

 Score = 63.2 bits (152), Expect(2) = 8e-08
 Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
 Frame = -3

Query: 987 LQQLIVKWWQA-PVNERLKQIHQAVPAIIL*ELWKRRNCIKHGEKRSG-GRVIYQVFAKI 814
           +Q  + +WW A P N   + + QA+P  I+  LWK R   K+G K +   RV Y V+   
Sbjct: 126 VQARLRQWWTARPRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAVYKDT 185

Query: 813 QRLVQIRNLSIRRIPNR*DELVKIMEGGRAQLNITKVLWKLPPPDCLFCNTDGA---SPG 643
            ++++I    +   P     L++  E  + ++ +    W  PP   +  NTDG+   + G
Sbjct: 186 FKMLKIAFPRV-NWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTG 244

Query: 642 RSAYEFCLRDSEGGLIHAQSEDIGTATNTEAEIIAITEALNF 517
                  +RD EG ++ A +  +G  TN +AE  A    L++
Sbjct: 245 HCGAGGIIRDKEGKMVLAFATPLGDGTNNKAEAEAALFGLSW 286



 Score = 20.8 bits (42), Expect(2) = 8e-08
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 505 NIIFQTDSKMVQKILSEGWKPPWNIAIWVDEA 410
           NI+ + DS++V   +S+   P    A WV +A
Sbjct: 294 NILIELDSQLVVHWISKKEPPIGMEANWVADA 325