BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040601
         (551 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...    99   1e-39
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255...    80   6e-33
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...    80   9e-32
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    86   2e-31
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259...    85   4e-31
ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245...    80   7e-31
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248...    80   2e-30
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260...    80   2e-30
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]    78   7e-30
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    73   2e-29
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243...    80   2e-29
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi...    74   3e-29
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    72   2e-28
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]    84   3e-28
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    79   1e-27
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    70   1e-27
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...    76   5e-27
gb|EOY25713.1| Uncharacterized protein TCM_027093 [Theobroma cacao]    75   1e-26
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    75   1e-26
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia...    75   2e-26

>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score = 98.6 bits (244), Expect(3) = 1e-39
 Identities = 52/91 (57%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -2

Query: 550 TKSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATP 371
           TKSNAF  L++ L ++ERQF+SKVK+IRSDNA +LG  +  S FL+S GIIHQT+ V TP
Sbjct: 110 TKSNAFATLKSLLSLIERQFSSKVKIIRSDNAYELGSGVIPSEFLASLGIIHQTTCVGTP 169

Query: 370 Q*N-VVKRKYTYLLEIARALLF*SQISIIYW 281
           Q N VV+RK+ +LLE  RALL+ S +   +W
Sbjct: 170 QQNGVVERKHRHLLETCRALLYQSHLPKKFW 200



 Score = 74.3 bits (181), Expect(3) = 1e-39
 Identities = 37/72 (51%), Positives = 46/72 (63%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY +L+     Y HLK F  LCF STL + R K  PRA P VFL Y   +KGYK+L+ 
Sbjct: 222 KCPYQVLFGSLPDYSHLKSFGSLCFVSTLTRHRDKLMPRAIPGVFLGYPFAQKGYKVLNL 281

Query: 36  DTKQMLVSREVK 1
            T Q++VSR+VK
Sbjct: 282 QTSQVIVSRDVK 293



 Score = 37.0 bits (84), Expect(3) = 1e-39
 Identities = 18/29 (62%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK-KYPMIF 198
           G+CLLT TYLINR PS+VL  K  Y ++F
Sbjct: 201 GDCLLTATYLINRFPSKVLNGKCPYQVLF 229


>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
           lycopersicum]
          Length = 1125

 Score = 79.7 bits (195), Expect(3) = 6e-33
 Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KSNA   ++ F+ ++E +F +K+K IRSDN L+   +  A  F  +KGIIHQ +   TPQ
Sbjct: 703 KSNALQTIKAFVSLIENEFQTKLKAIRSDNGLEFTSSE-AVHFFQTKGIIHQKTCPYTPQ 761

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ YLLE ARALLF S++ + YW
Sbjct: 762 QNGVVERKHKYLLETARALLFQSKLPLRYW 791



 Score = 73.9 bits (180), Expect(3) = 6e-33
 Identities = 35/73 (47%), Positives = 47/73 (64%)
 Frame = -3

Query: 222  RKKIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLL 43
            + K PY+ LY K  +Y HLK F CLCF + L   + KF PR  P VF+ Y  N KGYK+L
Sbjct: 811  QNKSPYETLYLKQPTYSHLKSFGCLCFPTVLKTHKDKFEPRGIPHVFVGYPFNTKGYKVL 870

Query: 42   D*DTKQMLVSREV 4
            +  TK++ +SR+V
Sbjct: 871  NLATKKVHISRDV 883



 Score = 33.5 bits (75), Expect(3) = 6e-33
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           GEC+LT  Y+INRLP+++L  K
Sbjct: 792 GECVLTAIYIINRLPTKLLQNK 813


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score = 79.7 bits (195), Expect(3) = 9e-32
 Identities = 35/71 (49%), Positives = 49/71 (69%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K P+++L +   +Y H+K F CLC++ST  + R KF+PRAK C F+ Y S  KGYKLLD 
Sbjct: 611 KCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDL 670

Query: 36  DTKQMLVSREV 4
           +T  ++VSR V
Sbjct: 671 ETHSIIVSRHV 681



 Score = 70.1 bits (170), Expect(3) = 9e-32
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KS+  TV+  F+ MVE QF + +K +RSDNA +L      + F  SKGI+   S   TPQ
Sbjct: 504 KSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN----FTQFYHSKGIVPYHSCPETPQ 559

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ ++L +AR+L F S I I YW
Sbjct: 560 QNSVVERKHQHILNVARSLFFQSHIPISYW 589



 Score = 33.5 bits (75), Expect(3) = 9e-32
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           G+C+LT  YLINRLP+ +L +K
Sbjct: 590 GDCILTAVYLINRLPAPILEDK 611


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 85.5 bits (210), Expect(3) = 2e-31
 Identities = 37/69 (53%), Positives = 47/69 (68%)
 Frame = -3

Query: 210 PYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD*DT 31
           PY +L++KP +Y + K F CLCF+ST+   RGKF PRA  C+FL Y  N KGYK+LD  T
Sbjct: 713 PYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTT 772

Query: 30  KQMLVSREV 4
            +  VSR V
Sbjct: 773 XKXFVSRNV 781



 Score = 67.4 bits (163), Expect(3) = 2e-31
 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = -2

Query: 550 TKSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATP 371
           TK+    +L NFL  V   FN+ ++ + SDN    G+     TF    GIIHQ S V TP
Sbjct: 603 TKTETXAILTNFLAYVHTHFNTNIQTLXSDN----GQEFNMPTFYQEHGIIHQLSCVETP 658

Query: 370 Q*NV-VKRKYTYLLEIARALLF*SQISIIYWVN 275
             N  V+RK+ +LL +AR+L+F S++ + YW +
Sbjct: 659 XQNGRVERKHQHLLNVARSLMFQSKLPLSYWTD 691



 Score = 28.9 bits (63), Expect(3) = 2e-31
 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -1

Query: 278 ECLLTTTYLINRLPSRVL-LEKKYPMIF 198
           +C+LT T+LINR PS +L  +  Y ++F
Sbjct: 691 DCVLTXTHLINRTPSSILNNQTPYQLLF 718


>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
           lycopersicum]
          Length = 986

 Score = 85.1 bits (209), Expect(2) = 4e-31
 Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KSNA   ++ F+ ++E QF++++K IRSDN L+   N  A++F   KGIIHQ S   TPQ
Sbjct: 697 KSNALHTIKAFVSLIENQFHTRLKTIRSDNGLEFSNNE-ATSFFQEKGIIHQKSCPYTPQ 755

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ YLLE ARALLF S++ + YW
Sbjct: 756 QNGVVERKHKYLLETARALLFQSKLPMRYW 785



 Score = 75.5 bits (184), Expect(2) = 4e-31
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = -3

Query: 216  KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
            K PY++LY+K   Y HLK F CLCF +TL   + KF PR  P +F+ Y  N KGYK+L+ 
Sbjct: 807  KSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHKEKFEPRTVPHIFIGYPFNTKGYKVLNL 866

Query: 36   DTKQMLVSREV 4
             TK++ V R+V
Sbjct: 867  ATKRIHVFRDV 877


>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
           lycopersicum]
          Length = 1094

 Score = 80.5 bits (197), Expect(3) = 7e-31
 Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = -2

Query: 550 TKSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATP 371
           TKSNA   L++F+ M+E QF   VK IR+DN L+   N  ++ F  +KGI+HQ +   TP
Sbjct: 626 TKSNALQNLKSFITMIENQFEVTVKKIRTDNGLEF-VNTESTNFFKTKGIVHQKTCPYTP 684

Query: 370 Q*N-VVKRKYTYLLEIARALLF*SQISIIYW 281
           Q N VV+RK+ +LLE ARALLF S++ + YW
Sbjct: 685 QQNGVVERKHKHLLETARALLFQSKLPVKYW 715



 Score = 64.3 bits (155), Expect(3) = 7e-31
 Identities = 28/72 (38%), Positives = 42/72 (58%)
 Frame = -3

Query: 219 KKIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD 40
           +K PY++LY +   Y H++ F CLC+ +     R KF PR  P +F+ Y    KGYK+L 
Sbjct: 736 QKCPYEVLYFRKPLYSHMRSFGCLCYPTVPIPHRAKFEPRTTPHIFIGYPHETKGYKVLS 795

Query: 39  *DTKQMLVSREV 4
             T ++ V R+V
Sbjct: 796 MSTGKIHVCRDV 807



 Score = 35.4 bits (80), Expect(3) = 7e-31
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           GEC+L  TY+INRLPS VL +K
Sbjct: 716 GECILCATYIINRLPSTVLNQK 737


>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
           lycopersicum]
          Length = 729

 Score = 80.5 bits (197), Expect(2) = 2e-30
 Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KSNA   ++ F+ ++E QF +++K IRSDN L+   +  A+ F   KGIIHQ S   TPQ
Sbjct: 354 KSNALHTIKAFISLIENQFQTRLKTIRSDNGLEF-TSTEATCFFQEKGIIHQKSCPYTPQ 412

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+ K+ YLLE ARALLF S+I + YW
Sbjct: 413 QNGVVEMKHKYLLETARALLFQSKIPVRYW 442



 Score = 78.2 bits (191), Expect(2) = 2e-30
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY++LY+K   Y HLK F CLCF +TL   + KF PR  P +F+ Y  N KGYK+L+ 
Sbjct: 464 KSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHKDKFEPRTVPHIFIGYPFNTKGYKVLNL 523

Query: 36  DTKQMLVSREV 4
            TK++ VSR+V
Sbjct: 524 ATKRIHVSRDV 534


>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
           lycopersicum]
          Length = 924

 Score = 80.5 bits (197), Expect(2) = 2e-30
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY++LY+K   Y HL+ F CLCF +TL   + KF PR  P +F+ Y  N KGYK+L+ 
Sbjct: 642 KSPYELLYQKKPFYSHLRNFGCLCFPTTLKTHKDKFEPRTMPHIFIGYPFNTKGYKVLNW 701

Query: 36  DTKQMLVSREV 4
           DTK++ VSR+V
Sbjct: 702 DTKRIHVSRDV 712



 Score = 77.8 bits (190), Expect(2) = 2e-30
 Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KSNA   ++ F+ ++E QF++++K IRSDN L+      A+ F   K IIHQ S   T Q
Sbjct: 532 KSNALHTIKAFISLIENQFHTRLKTIRSDNGLEFSSTE-ATCFFQEKSIIHQQSCPCTQQ 590

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYWV 278
            N +V+RK+ YLLE ARALLF S++ + YWV
Sbjct: 591 QNGLVERKHKYLLETARALLFQSKMPMRYWV 621


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score = 78.2 bits (191), Expect(3) = 7e-30
 Identities = 36/69 (52%), Positives = 47/69 (68%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K P++IL++K   Y HL+ F CLC+ STL   R KF+PRAK  VFL Y    KGYKLLD 
Sbjct: 618 KTPFEILHDKLPDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDI 677

Query: 36  DTKQMLVSR 10
           +T+ + +SR
Sbjct: 678 ETRSISISR 686



 Score = 70.5 bits (171), Expect(3) = 7e-30
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KS     + +F   V++QF  +VK IRSDNA +L      S F  S G+IH  S V TPQ
Sbjct: 511 KSEVQKYIPDFFAFVKKQFGKEVKAIRSDNAPELF----LSNFYHSLGVIHYRSCVETPQ 566

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ ++L +ARALLF S + + YW
Sbjct: 567 QNSVVERKHQHILNVARALLFXSSLPVCYW 596



 Score = 28.1 bits (61), Expect(3) = 7e-30
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 278 ECLLTTTYLINRLPSRVLLEK 216
           +C+LT  YLINR PS  L  K
Sbjct: 598 DCILTAVYLINRTPSPFLNNK 618


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 72.8 bits (177), Expect(3) = 2e-29
 Identities = 33/72 (45%), Positives = 47/72 (65%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY+IL      Y+ L+ F CLC+SST  + R KF PR++ C+FL Y S  KGYKL+D 
Sbjct: 762 KTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDL 821

Query: 36  DTKQMLVSREVK 1
           ++  + +SR V+
Sbjct: 822 ESNTVFISRNVQ 833



 Score = 69.7 bits (169), Expect(3) = 2e-29
 Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = -2

Query: 550 TKSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATP 371
           TKS   TV   F+Q VE Q+  KVK +RSDNA +L      ++F + KGI+   S   TP
Sbjct: 654 TKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPELK----FTSFYAEKGIVSFHSCPETP 709

Query: 370 Q*N-VVKRKYTYLLEIARALLF*SQISIIYW 281
           + N VV+RK+ ++L +ARAL+F SQ+ +  W
Sbjct: 710 EQNSVVERKHQHILNVARALMFQSQVPLSLW 740



 Score = 33.1 bits (74), Expect(3) = 2e-29
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -1

Query: 287 LLGECLLTTTYLINRLPSRVLLEK 216
           L G+C+LT  +LINR PS++L+ K
Sbjct: 739 LWGDCVLTAVFLINRTPSQLLMNK 762


>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
           lycopersicum]
          Length = 957

 Score = 79.7 bits (195), Expect(2) = 2e-29
 Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KSNA   ++ F+ ++E QF +K+K IRSDN L+   +  A  F  +KGIIHQ +   TPQ
Sbjct: 696 KSNALQTIKAFVSLIENQFQTKLKAIRSDNGLEFTSSE-AVHFFQTKGIIHQKTCPYTPQ 754

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ YLLE AR+LLF S++ + YW
Sbjct: 755 QNGVVERKHKYLLETARSLLFQSKLPLRYW 784



 Score = 75.5 bits (184), Expect(2) = 2e-29
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = -3

Query: 222  RKKIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLL 43
            + K PY+ILY K  +Y HLK F CLCF + L   + KF PR  P +F+ Y  N KGYK+L
Sbjct: 804  QNKSPYEILYLKQPTYSHLKSFGCLCFPTVLKTHKDKFEPRTIPHIFVGYPFNTKGYKVL 863

Query: 42   D*DTKQMLVSREV 4
            +  TK++ +SR+V
Sbjct: 864  NLATKKVHISRDV 876


>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 74.3 bits (181), Expect(3) = 3e-29
 Identities = 34/71 (47%), Positives = 46/71 (64%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY+IL      Y  L+ F CLC+SST  + R KF PR+K C+FL Y+S  KGYKL+D 
Sbjct: 621 KTPYEILSGTAPQYGQLRTFGCLCYSSTSPKQRHKFQPRSKACIFLGYSSGYKGYKLMDL 680

Query: 36  DTKQMLVSREV 4
           ++  + +SR V
Sbjct: 681 ESNAIFISRNV 691



 Score = 67.4 bits (163), Expect(3) = 3e-29
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = -2

Query: 550 TKSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATP 371
           TKS   T+  +F+Q VE Q+  KVK +RSDNA +L      ++    KGI+   S   TP
Sbjct: 513 TKSEVLTIFHDFIQQVENQYKVKVKAVRSDNAPELR----FTSLYQRKGIMAFHSCPETP 568

Query: 370 Q*N-VVKRKYTYLLEIARALLF*SQISIIYW 281
           + N VV+RK+ ++L +ARAL+F SQ+ +  W
Sbjct: 569 EQNSVVERKHQHILNVARALMFQSQVPLFLW 599



 Score = 32.7 bits (73), Expect(3) = 3e-29
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -1

Query: 287 LLGECLLTTTYLINRLPSRVLLEK 216
           L GEC+LT  +LINR PS++L  K
Sbjct: 598 LWGECVLTAVFLINRTPSQLLSNK 621


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 72.0 bits (175), Expect(3) = 2e-28
 Identities = 34/72 (47%), Positives = 47/72 (65%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K P+++L  K   Y  LK F CLC+SST ++ R KF PR++ CVFL Y    KGYKLLD 
Sbjct: 773 KTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDL 832

Query: 36  DTKQMLVSREVK 1
           ++  + +SR V+
Sbjct: 833 ESNVVHISRNVE 844



 Score = 70.1 bits (170), Expect(3) = 2e-28
 Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = -2

Query: 550 TKSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATP 371
           +KS+  TV   F+ +VE Q++++VK +RSDNA    K L  + F  +KGI+   S   TP
Sbjct: 665 SKSDVLTVFPAFIDLVENQYDTRVKSVRSDNA----KELAFTEFYKAKGIVSFHSCPETP 720

Query: 370 Q*N-VVKRKYTYLLEIARALLF*SQISIIYW 281
           + N VV+RK+ ++L +ARAL+F S +S+ YW
Sbjct: 721 EQNSVVERKHQHILNVARALMFQSNMSLPYW 751



 Score = 30.0 bits (66), Expect(3) = 2e-28
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           G+C+LT  +LINR PS +L  K
Sbjct: 752 GDCVLTAVFLINRTPSALLSNK 773


>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
          Length = 1128

 Score = 83.6 bits (205), Expect(2) = 3e-28
 Identities = 36/69 (52%), Positives = 47/69 (68%)
 Frame = -3

Query: 210 PYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD*DT 31
           PY +L++KP +Y + + FDCLCF+ST+   RGKF PRA  C+FL Y  N KGYK+LD  T
Sbjct: 407 PYQLLFQKPPNYNYFEVFDCLCFASTITNNRGKFHPRATKCIFLGYPPNIKGYKVLDLTT 466

Query: 30  KQMLVSREV 4
            +  VS  V
Sbjct: 467 LKTFVSXNV 475



 Score = 67.4 bits (163), Expect(2) = 3e-28
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -2

Query: 544 SNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ* 365
           S    +L NFL  V   FN+ ++ +RSDN    G+     TF    GIIHQ S V TP+ 
Sbjct: 299 SKTRAILTNFLAYVHTHFNTNIQTLRSDN----GQEFNMPTFYQEHGIIHQLSCVETPEQ 354

Query: 364 NV-VKRKYTYLLEIARALLF*SQISIIYWVN 275
           N  V+RK+ +LL +AR+L+F S++ + +W N
Sbjct: 355 NGRVERKHQHLLNVARSLMFQSKLPLSHWTN 385


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 79.0 bits (193), Expect(3) = 1e-27
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = -3

Query: 216  KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
            K P+++L+ K   Y  LK F CLC+ ST  Q R KFAPRA+ CVFL Y S  KGYKLLD 
Sbjct: 790  KSPFELLHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDL 849

Query: 36   DTKQMLVSREV 4
            +T  + +SR V
Sbjct: 850  ETNTIHISRHV 860



 Score = 61.2 bits (147), Expect(3) = 1e-27
 Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           K++   +  +FL+MVE Q+ + VK +RSDNA +L           +KGII   S   TPQ
Sbjct: 683 KNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPELR----FEALYQAKGIISYHSCPETPQ 738

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ ++L +ARAL+F + + + +W
Sbjct: 739 QNSVVERKHQHILNVARALMFEANMPLEFW 768



 Score = 29.3 bits (64), Expect(3) = 1e-27
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           G+C+L+  +LINRLP+ +L  K
Sbjct: 769 GDCILSAVFLINRLPTPLLSNK 790


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 69.7 bits (169), Expect(3) = 1e-27
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KS+  T+  +F+ MVE Q+++KVK +RSDNA +L            KGI+   S   TP+
Sbjct: 631 KSDVLTIFPDFITMVETQYDTKVKAVRSDNAPELK----FEELYRRKGIVAYHSCPETPE 686

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ ++L +ARALLF SQI + YW
Sbjct: 687 QNSVVERKHQHILNVARALLFQSQIPLSYW 716



 Score = 69.7 bits (169), Expect(3) = 1e-27
 Identities = 33/71 (46%), Positives = 45/71 (63%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K  +++L +K   Y HLK F CLC++ST  + R KF  RA+ C FL Y S  KGYKLLD 
Sbjct: 738 KTLFEMLTKKVPDYTHLKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDL 797

Query: 36  DTKQMLVSREV 4
           ++  + +SR V
Sbjct: 798 ESHTIFISRNV 808



 Score = 29.6 bits (65), Expect(3) = 1e-27
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           G+C+LT  ++INR PS V+  K
Sbjct: 717 GDCILTAVFIINRTPSPVISNK 738


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
           gi|7268152|emb|CAB78488.1| retrovirus-related like
           polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score = 76.3 bits (186), Expect(2) = 5e-27
 Identities = 37/71 (52%), Positives = 45/71 (63%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY+++  K   Y  LK F CLCF ST A  R KF PRA+ CVFL Y S  KGYK+LD 
Sbjct: 781 KSPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDL 840

Query: 36  DTKQMLVSREV 4
           ++  + VSR V
Sbjct: 841 ESHSVTVSRNV 851



 Score = 70.9 bits (172), Expect(2) = 5e-27
 Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           K +  +V   F+++V  QFN+K+K IRSDNA +LG     +  +   G++H  S   TPQ
Sbjct: 674 KKDVSSVFPEFIKLVSTQFNAKIKAIRSDNAPELG----FTEIVKEHGMLHHFSCAYTPQ 729

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ ++L +ARALLF S I + YW
Sbjct: 730 QNSVVERKHQHILNVARALLFQSNIPMQYW 759


>gb|EOY25713.1| Uncharacterized protein TCM_027093 [Theobroma cacao]
          Length = 994

 Score = 75.5 bits (184), Expect(3) = 1e-26
 Identities = 35/71 (49%), Positives = 43/71 (60%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY++L+ K  SY HL+ F CLCF  TL Q R K   RA  C+FL Y +N KGYK+ D 
Sbjct: 523 KTPYELLHHKLPSYDHLRVFGCLCFMFTLTQNRKKLDKRATKCIFLGYPNNMKGYKVYDL 582

Query: 36  DTKQMLVSREV 4
               +L SR V
Sbjct: 583 SANNVLKSRNV 593



 Score = 61.2 bits (147), Expect(3) = 1e-26
 Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KS    ++ +F   V++QFNS +K I +DNA +LG       F  + GI+HQ S V   Q
Sbjct: 416 KSEVSIIIPSFNAFVQKQFNSAIKSIGTDNAKELG----LLYFFENTGIVHQLSCVEAHQ 471

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N +V+RK+ ++L +AR LL  S + I +W
Sbjct: 472 QNGIVERKHQHILVVARGLLHQSNVPIYFW 501



 Score = 29.3 bits (64), Expect(3) = 1e-26
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           G+ +LT  ++INRLPS+VL  K
Sbjct: 502 GDAVLTAVHIINRLPSKVLHNK 523


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
          Length = 1131

 Score = 75.1 bits (183), Expect(3) = 1e-26
 Identities = 34/71 (47%), Positives = 46/71 (64%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY++L  K   Y  L+ F CLC+ ST  + R KF PR++ CVFL Y S  KGYKLLD 
Sbjct: 722 KSPYEVLMGKAPQYDQLRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDL 781

Query: 36  DTKQMLVSREV 4
           ++ ++ +SR V
Sbjct: 782 ESNKIYISRNV 792



 Score = 60.5 bits (145), Expect(3) = 1e-26
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -2

Query: 550 TKSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATP 371
           +KS+   +   F+  +E Q+N+K+K +R DNA +L      +     KGI+   S   T 
Sbjct: 614 SKSDVLHIFPTFVNQIETQYNTKIKSVRRDNAPELS----FTELFKEKGIVSYHSCPETL 669

Query: 370 Q*N-VVKRKYTYLLEIARALLF*SQISIIYW 281
           + N V++RK+ +LL +ARAL+F SQ+ + YW
Sbjct: 670 EQNSVLERKHQHLLNVARALMFQSQVPLQYW 700



 Score = 30.0 bits (66), Expect(3) = 1e-26
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           G+C+LT  +LINR PS +L  K
Sbjct: 701 GDCVLTAAFLINRTPSPLLANK 722


>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268497|emb|CAB78748.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1433

 Score = 75.5 bits (184), Expect(3) = 2e-26
 Identities = 37/71 (52%), Positives = 46/71 (64%)
 Frame = -3

Query: 216 KIPYDILYEKPSSYQHLKYFDCLCFSSTLAQGRGKFAPRAKPCVFLNYTSNKKGYKLLD* 37
           K PY+ L   P +Y+ LK F CLC+SST  + R KF PRA+ CVFL Y    KGYKLLD 
Sbjct: 748 KSPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDI 807

Query: 36  DTKQMLVSREV 4
           +T  + +SR V
Sbjct: 808 ETHAVSISRHV 818



 Score = 58.5 bits (140), Expect(3) = 2e-26
 Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -2

Query: 547 KSNAFTVLQNFLQMVERQFNSKVKVIRSDNALKLGKNL*ASTFLSSKGIIHQTSYVATPQ 368
           KS+   V   F+ MV  Q+ +K+K +RSDNA +L      +   ++ GI+   S   TP+
Sbjct: 641 KSDVLHVFPAFINMVHTQYQTKLKSVRSDNAHELK----FTDLFAAHGIVAYHSCPETPE 696

Query: 367 *N-VVKRKYTYLLEIARALLF*SQISIIYW 281
            N VV+RK+ ++L +ARALLF S I + +W
Sbjct: 697 QNSVVERKHQHILNVARALLFQSNIPLEFW 726



 Score = 31.2 bits (69), Expect(3) = 2e-26
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -1

Query: 281 GECLLTTTYLINRLPSRVLLEK 216
           G+C+LT  +LINRLP+ VL  K
Sbjct: 727 GDCVLTAVFLINRLPTPVLNNK 748