BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040587
         (582 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    44   4e-07
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]      47   5e-07
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    39   5e-06
gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]      42   6e-06

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 43.9 bits (102), Expect(2) = 4e-07
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +2

Query: 233 KRGRGRPKTTCKIIITINLKYLKILADLAKDRKQWKLKIRTGD 361
           ++GRGRP+ T +  +  +L+YL ++ D+ +DR QW+ KI   D
Sbjct: 577 RKGRGRPRKTLEETLRKDLEYLDLMEDMTQDRAQWRSKIHVAD 619



 Score = 36.2 bits (82), Expect(2) = 4e-07
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +1

Query: 124 IEDKIRESRLRWFRSVLRRPLNAPVFR*D 210
           IE K+RE+ LRWF  V RRP +AP+ R D
Sbjct: 541 IEGKMRENWLRWFGHVQRRPTDAPIRRCD 569


>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
          Length = 1413

 Score = 47.0 bits (110), Expect(2) = 5e-07
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = +1

Query: 124  IEDKIRESRLRWFRSVLRRPLNAPVFR*DNMMIENVKK 237
            IEDK+RE RLRWF  V RRPL APV   ++++I N ++
Sbjct: 1018 IEDKVREGRLRWFGHVQRRPLEAPVRAWEDILIPNTRR 1055



 Score = 32.7 bits (73), Expect(2) = 5e-07
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 17   NKMNVVNMGMLQWMCSLTRLNKIRNDHIHLLEGTS 121
            +KM+V  M ML+WM   TR+++I+N+ I    G +
Sbjct: 982  SKMSVAEMRMLRWMSGQTRMDRIKNEVIRSKVGVA 1016


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 39.3 bits (90), Expect(2) = 5e-06
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = +1

Query: 124 IEDKIRESRLRWFRSVLRRPLNAPVFR*DNMMIE 225
           + DK+RE+RLRWF  V RR  +APV R + M++E
Sbjct: 145 VVDKLREARLRWFGHVKRRSADAPVRRCEVMVVE 178



 Score = 37.0 bits (84), Expect(2) = 5e-06
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = +2

Query: 17  NKMNVVNMGMLQWMCSLTRLNKIRNDHIHLLEGTST 124
           +KM+V  M ML+WMC  TR +KIRN+ I    G ++
Sbjct: 109 HKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVAS 144


>gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]
          Length = 714

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = +1

Query: 124 IEDKIRESRLRWFRSVLRRPLNAPVFR*DNMMIENVKK 237
           IEDK+ E  LRW+  V RRPL APV   ++++I N ++
Sbjct: 529 IEDKVGEGHLRWYEHVQRRPLEAPVCAWEDILIPNTRR 566



 Score = 33.5 bits (75), Expect(2) = 6e-06
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +2

Query: 17  NKMNVVNMGMLQWMCSLTRLNKIRNDHIHLLEGTS 121
           +KM+V  M ML+WM   TR+++IRN+ I    G +
Sbjct: 493 SKMSVAEMRMLRWMSGHTRMDRIRNEVIRSKVGVA 527