BLASTX nr result
ID: Atropa21_contig00040487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040487
(709 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261... 110 4e-38
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 97 2e-31
ref|XP_004240821.1| PREDICTED: uncharacterized protein LOC101254... 89 8e-31
ref|XP_004250685.1| PREDICTED: uncharacterized protein LOC101254... 77 2e-28
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 130 5e-28
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 85 8e-26
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 85 8e-26
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 73 1e-25
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 78 3e-25
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 78 3e-25
gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indi... 85 5e-25
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 74 8e-25
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 86 1e-24
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 80 1e-24
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 80 1e-24
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 80 1e-24
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786... 79 1e-24
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar... 77 2e-24
gb|ABF95850.1| retrotransposon protein, putative, unclassified [... 85 2e-24
gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japo... 85 2e-24
>ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261795 [Solanum
lycopersicum]
Length = 413
Score = 110 bits (274), Expect(2) = 4e-38
Identities = 52/91 (57%), Positives = 68/91 (74%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDF 612
NFF +GK+ K NCT V+LIPKV+ P+++KEY PI+CC+ LYKII KVIT R+ +V+ D
Sbjct: 284 NFFTTGKLFKPFNCTLVSLIPKVQCPKTVKEYTPIACCTVLYKIISKVITRRMHDVIHDV 343
Query: 613 LDNCQSAFVPDRII*DNIIMGHELVKGYGRK 705
+ Q+ F+P R I DNII+ HELVK Y RK
Sbjct: 344 ICESQAGFIPGRKIADNIILAHELVKTYTRK 374
Score = 75.1 bits (183), Expect(2) = 4e-38
Identities = 36/78 (46%), Positives = 48/78 (61%)
Frame = +3
Query: 207 VASSIPAINPQVVKDGPILSRVQQLALIQPVTSEEVQLALNSIDDVKAPGCDGLNSCFFK 386
+ S +PAIN QV+K GP+ SR Q++ L +T +E+ L S + KAPG DG N+ FFK
Sbjct: 209 IRSKLPAINAQVMKRGPVSSRQQRIQLCTDITEQEIYSTLQSYGNDKAPGIDGYNALFFK 268
Query: 387 KVWPIIGRDTTAAVLQFF 440
W II +D AV FF
Sbjct: 269 HTWKIIKKDVIEAVKNFF 286
>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
lycopersicum]
Length = 421
Score = 96.7 bits (239), Expect(3) = 2e-31
Identities = 46/91 (50%), Positives = 66/91 (72%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDF 612
+FF+ GK+ K NCT V+LIPKV+SP+++KEY I+CC+ LYKII KVIT R+ +V+ +
Sbjct: 151 SFFKPGKLFKPFNCTLVSLIPKVQSPKNVKEYRTITCCTVLYKIISKVITNRMHDVIHNV 210
Query: 613 LDNCQSAFVPDRII*DNIIMGHELVKGYGRK 705
+ + Q F+ R I +NI++ HELV Y RK
Sbjct: 211 ICDSQVGFILGRKISENILLAHELVNSYTRK 241
Score = 53.5 bits (127), Expect(3) = 2e-31
Identities = 35/108 (32%), Positives = 48/108 (44%)
Frame = +3
Query: 117 NIEILSRDMVHSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPILSRVQQLALIQP 296
NI + M++ Q+I+ E+ FY+ L+G+ A
Sbjct: 74 NILSIHGRMLYEPQEIQDEVVLFYKSLMGTSA---------------------------- 105
Query: 297 VTSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
VT E++ AL SI + KAPG DG N+ FFK W II D V FF
Sbjct: 106 VTEEKIFAALQSIGNDKAPGIDGYNAFFFKYTWKIIKNDIIEVVQSFF 153
Score = 32.7 bits (73), Expect(3) = 2e-31
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 1 IRESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQG 138
I ES +QK+R + ++L D N+ YF + +K R + I + S G
Sbjct: 35 IEESAQRQKARAKWIQLGDANNKYFSSVIKERTQNKHIRNILSIHG 80
>ref|XP_004240821.1| PREDICTED: uncharacterized protein LOC101254905 [Solanum
lycopersicum]
Length = 224
Score = 89.4 bits (220), Expect(3) = 8e-31
Identities = 47/90 (52%), Positives = 60/90 (66%)
Frame = +1
Query: 436 FFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDFL 615
FF +GKM K NCT V+L PKV+SP+++KEY I+CC+ L +II KVIT R+ EV+ +
Sbjct: 120 FFTTGKMCKPFNCTLVSLFPKVQSPKTVKEYRAIACCTILCQIISKVITKRMHEVIHTVV 179
Query: 616 DNCQSAFVPDRII*DNIIMGHELVKGYGRK 705
C S P R I D II+ HEL K Y RK
Sbjct: 180 --CDSQAAPGRKIADYIILAHELGKAYTRK 207
Score = 59.3 bits (142), Expect(3) = 8e-31
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 126 ILSRD--MVHSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPILSRVQQLALIQPV 299
ILS D M++ Q+I++E FY+ L+GS A +
Sbjct: 42 ILSIDGRMLYEPQEIQEEFGMFYKSLIGSSAD---------------------------I 74
Query: 300 TSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
T +E+ AL SI + KAPG DG N+ FFK W II +D AV +FF
Sbjct: 75 TEQEIYTALQSIGNDKAPGIDGYNAFFFKHTWKIIKKDVIEAVKRFF 121
Score = 32.3 bits (72), Expect(3) = 8e-31
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 1 IRESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQG 138
I S +QK+R + ++L D N+ YF + +K R N I ++ S G
Sbjct: 2 IEGSALRQKARARWIKLGDANNKYFSSVIKERTQKNHIRSILSIDG 47
>ref|XP_004250685.1| PREDICTED: uncharacterized protein LOC101254263 [Solanum
lycopersicum]
Length = 140
Score = 77.0 bits (188), Expect(2) = 2e-28
Identities = 38/81 (46%), Positives = 48/81 (59%)
Frame = +3
Query: 198 LGSVASSIPAINPQVVKDGPILSRVQQLALIQPVTSEEVQLALNSIDDVKAPGCDGLNSC 377
+G+ A +P IN QV+K GP+LSR ++ L +T E+ AL SI KAPG DG N+
Sbjct: 1 MGTAADRLPTINTQVMKRGPVLSRQHRIKLCATITDHEIVKALKSIGSDKAPGIDGYNAL 60
Query: 378 FFKKVWPIIGRDTTAAVLQFF 440
FFK W II D AV FF
Sbjct: 61 FFKHTWKIIEHDVIDAVKSFF 81
Score = 75.5 bits (184), Expect(2) = 2e-28
Identities = 32/57 (56%), Positives = 47/57 (82%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVM 603
+FF +G + K+ NCT V+LIPKV+SP+++KE+ PI+CC+ +YKII KVIT R+ EV+
Sbjct: 79 SFFNTGNLFKSFNCTLVSLIPKVQSPKNVKEFRPIACCTVMYKIISKVITQRMHEVI 135
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 130 bits (326), Expect = 5e-28
Identities = 81/235 (34%), Positives = 123/235 (52%)
Frame = +1
Query: 1 IRESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTWFTLNKTLRRRSL 180
I ESI KQKSR+Q L L D+NS +F +K R + N I+ L++ +G T N ++
Sbjct: 342 IDESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEIC 401
Query: 181 DSIKSF*DLLLVQFLPLIPRWLRMVLYCQGSNS*HLYNQ*QVKRYNWHLTP*MT*KLQAV 360
+ + Q + +R+ ++ L ++ + L K +
Sbjct: 402 NFYRRLLGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGL 461
Query: 361 MG*TLASLKKFGPXXXXXXXXXYYNFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PIS 540
G KK +FFE+G M K INCT+VTLIPK+ + K+Y PI+
Sbjct: 462 DGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIA 521
Query: 541 CCSTLYKIICKVITMRLQEVMDDFLDNCQSAFVPDRII*DNIIMGHELVKGYGRK 705
CCSTLYKII K++T RLQ V+ + +D Q+ F+P+R I DNI++ EL++GY R+
Sbjct: 522 CCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRR 576
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 84.7 bits (208), Expect(3) = 8e-26
Identities = 38/91 (41%), Positives = 63/91 (69%)
Frame = +1
Query: 430 YNFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDD 609
+ FF+SG++ K N T++ LIPK + ++ E+ PISC +TLYK+I K++T RLQ ++
Sbjct: 351 HEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSA 410
Query: 610 FLDNCQSAFVPDRII*DNIIMGHELVKGYGR 702
+ + QSAF+P R + +N+++ E+V GY R
Sbjct: 411 VIGHSQSAFLPGRSLAENVLLATEMVHGYNR 441
Score = 46.6 bits (109), Expect(3) = 8e-26
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +3
Query: 141 MVHSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPIL-----SRVQQLALIQPVTS 305
++ S+Q I +Y+ LLGS+ S +D +L S+ Q L + T
Sbjct: 254 LIDSQQGILDHCVTYYERLLGSIESPFSMEQ----EDMNLLLTYRCSQDQCSELEKSFTD 309
Query: 306 EEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
+E++ A S+ K G DG + FF+ W IIG + AA+ +FF
Sbjct: 310 DEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFF 354
Score = 32.7 bits (73), Expect(3) = 8e-26
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQG 138
ES + Q+SRV D+N+ YFH + +R S N+I +L G
Sbjct: 209 ESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNG 252
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 84.7 bits (208), Expect(3) = 8e-26
Identities = 38/91 (41%), Positives = 63/91 (69%)
Frame = +1
Query: 430 YNFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDD 609
+ FF+SG++ K N T++ LIPK + ++ E+ PISC +TLYK+I K++T RLQ ++
Sbjct: 351 HEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSA 410
Query: 610 FLDNCQSAFVPDRII*DNIIMGHELVKGYGR 702
+ + QSAF+P R + +N+++ E+V GY R
Sbjct: 411 VIGHSQSAFLPGRSLAENVLLATEMVHGYNR 441
Score = 46.6 bits (109), Expect(3) = 8e-26
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +3
Query: 141 MVHSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPIL-----SRVQQLALIQPVTS 305
++ S+Q I +Y+ LLGS+ S +D +L S+ Q L + T
Sbjct: 254 LIDSQQGILDHCVTYYERLLGSIESPFSMEQ----EDMNLLLTYRCSQDQCSELEKSFTD 309
Query: 306 EEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
+E++ A S+ K G DG + FF+ W IIG + AA+ +FF
Sbjct: 310 DEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFF 354
Score = 32.7 bits (73), Expect(3) = 8e-26
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQG 138
ES + Q+SRV D+N+ YFH + +R S N+I +L G
Sbjct: 209 ESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNG 252
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 72.8 bits (177), Expect(3) = 1e-25
Identities = 31/73 (42%), Positives = 52/73 (71%)
Frame = +1
Query: 463 AINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDFLDNCQSAFVP 642
++N T + LIPKV+ P + E+ PIS C+ +Y+I+ K I RL+ +++ + QSAF+P
Sbjct: 578 SLNHTFIALIPKVEKPRKVMEFRPISLCNVVYRIVAKAIANRLKPILNHIISPNQSAFIP 637
Query: 643 DRII*DNIIMGHE 681
+R+I DN+I+G+E
Sbjct: 638 NRLITDNVIIGYE 650
Score = 57.4 bits (137), Expect(3) = 1e-25
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = +3
Query: 144 VHSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPILSRVQQLALIQPVTSEEVQLA 323
V + IE E GF+Q+L S S I+ + P +S+ L +P T E++ A
Sbjct: 472 VDDPEGIEGEFCGFFQQLFTSSNPSQTQISEALKGLLPKVSQEMNTHLEEPFTPEDITRA 531
Query: 324 LNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVL 431
L+ + KAPG DGL + FF+K W I+G T L
Sbjct: 532 LSEMCPTKAPGPDGLPAAFFQKHWQIVGEGLTKTCL 567
Score = 33.1 bits (74), Expect(3) = 1e-25
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTW 144
E +KQ+SR L+ D N+ +FH+ R N I ++ QG W
Sbjct: 426 EVYWKQRSRADWLKEGDKNTKFFHSKASARRRKNKIWGVEDDQGNW 471
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 77.8 bits (190), Expect(3) = 3e-25
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +1
Query: 436 FFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDFL 615
FF G M N T + LIPK + P M + PIS CS LYKII K++ RLQ + + +
Sbjct: 437 FFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIV 496
Query: 616 DNCQSAFVPDRII*DNIIMGHELV 687
+ QSAFV +R+I DNI++ HELV
Sbjct: 497 SDTQSAFVSERLITDNILVAHELV 520
Score = 48.9 bits (115), Expect(3) = 3e-25
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +3
Query: 255 PILSRVQQLALIQPVTSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQ 434
P +S V +L+ V+++E++ A+ SI APG DG+++ FF+ W +G T+ V +
Sbjct: 377 PRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKK 436
Query: 435 FF 440
FF
Sbjct: 437 FF 438
Score = 35.4 bits (80), Expect(3) = 3e-25
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTWFT 150
E+ +KQKSR + LR + NS YFHA +K I LK G T
Sbjct: 296 EAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQT 343
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 77.8 bits (190), Expect(3) = 3e-25
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +1
Query: 436 FFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDFL 615
FF G M N T + LIPK + P M + PIS CS LYKII K++ RLQ + + +
Sbjct: 440 FFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIV 499
Query: 616 DNCQSAFVPDRII*DNIIMGHELV 687
+ QSAFV +R+I DNI++ HELV
Sbjct: 500 SDTQSAFVSERLITDNILVAHELV 523
Score = 48.9 bits (115), Expect(3) = 3e-25
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +3
Query: 255 PILSRVQQLALIQPVTSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQ 434
P +S V +L+ V+++E++ A+ SI APG DG+++ FF+ W +G T+ V +
Sbjct: 380 PRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKK 439
Query: 435 FF 440
FF
Sbjct: 440 FF 441
Score = 35.4 bits (80), Expect(3) = 3e-25
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTWFT 150
E+ +KQKSR + LR + NS YFHA +K I LK G T
Sbjct: 299 EAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQT 346
>gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indica Group]
Length = 1059
Score = 84.7 bits (208), Expect(3) = 5e-25
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDF 612
NFF G M +N TS+ LIPKV PE +KE+ PIS C+ +YK++ K + RL+ ++ D
Sbjct: 231 NFFLQGVMLAGVNDTSIVLIPKVSKPEQLKEFRPISLCNVIYKVVSKCMVNRLRPILKDI 290
Query: 613 LDNCQSAFVPDRII*DNIIMGHELV 687
+ QSAF+P+R+I DN ++ E +
Sbjct: 291 ISVTQSAFIPERLITDNALIAFECI 315
Score = 47.4 bits (111), Expect(3) = 5e-25
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +3
Query: 144 VHSEQDIEKEIAGFYQELLGSVASSIP-----AINPQVVKDGPILSRVQQLALIQPVTSE 308
V +++++E F+Q L S P A+ P+V DG L +P + +
Sbjct: 137 VENKEEMEHMAREFFQTLYLKDNSVDPRELIDALTPRV-DDG------MNAGLCKPFSDD 189
Query: 309 EVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
E+ AL I +KAPG DG + FF++ W ++ ++ T AV FF
Sbjct: 190 EIAYALFQIGPLKAPGPDGFPARFFQRNWAVLKKEVTTAVRNFF 233
Score = 29.3 bits (64), Expect(3) = 5e-25
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTWFTLNK 159
E ++ Q+SRV L+ D N+ +FH R N I LK+ + + F NK
Sbjct: 91 EMMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLKA-EDSRFVENK 140
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 73.9 bits (180), Expect(3) = 8e-25
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +1
Query: 436 FFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDFL 615
FF S + +N T + LIPK P + +Y PI+ C+ YKI+ K++T R+Q ++ +
Sbjct: 369 FFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLI 428
Query: 616 DNCQSAFVPDRII*DNIIMGHELV 687
QSAFVP R+I DN+++ HE++
Sbjct: 429 SENQSAFVPGRVISDNVLITHEVL 452
Score = 48.9 bits (115), Expect(3) = 8e-25
Identities = 29/98 (29%), Positives = 51/98 (52%)
Frame = +3
Query: 147 HSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPILSRVQQLALIQPVTSEEVQLAL 326
H E I + I+G++Q++ S + ++ + ++ P++S+ L + EEV+ A+
Sbjct: 275 HEEHQISQIISGYFQQIFTSESDGDFSVVDEAIE--PMVSQGDNDFLTRIPNDEEVKDAV 332
Query: 327 NSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
SI+ KAPG DG + F+ W II D + FF
Sbjct: 333 FSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFF 370
Score = 37.7 bits (86), Expect(3) = 8e-25
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 1 IRESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQG 138
+ E +KQ+SRV L D N+ YFHA +NR + N + ++ G
Sbjct: 226 LEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMEDING 271
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 85.9 bits (211), Expect(2) = 1e-24
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDF 612
+FF G + K +N T + LIPK K +K+Y PISCC+ LYK I K++ RL+ ++ F
Sbjct: 219 SFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKF 278
Query: 613 LDNCQSAFVPDRII*DNIIMGHELVKGY 696
+ QSAFV DR++ +N+++ ELVK Y
Sbjct: 279 IVGNQSAFVKDRLLIENVLLATELVKDY 306
Score = 54.3 bits (129), Expect(2) = 1e-24
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +3
Query: 123 EILSRD--MVHSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDG-PI-LSRVQQLALI 290
EI++RD +V S+QDI+ E ++Q+ L ++ + + + +++ P S L
Sbjct: 112 EIVTRDGLVVTSQQDIQTEAVNYFQDFLQTIPADYEGMCVEELENLLPFRCSEDDHRLLT 171
Query: 291 QPVTSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
+ VT EE++ + S+ K+PG DG S F+K W IIG + A+ FF
Sbjct: 172 RVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFF 221
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 80.5 bits (197), Expect(3) = 1e-24
Identities = 33/84 (39%), Positives = 60/84 (71%)
Frame = +1
Query: 436 FFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDFL 615
FF + M ++IN T++ +IPK+ +PE++ +Y PI+ C+ LYKII K + RL+ +D +
Sbjct: 856 FFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIV 915
Query: 616 DNCQSAFVPDRII*DNIIMGHELV 687
+ Q+AF+P R++ DN+++ HE++
Sbjct: 916 SDSQAAFIPGRLVNDNVMIAHEMM 939
Score = 42.0 bits (97), Expect(3) = 1e-24
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 255 PILSRVQQLALIQPVTSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQ 434
PI++ L + ++ E+ A+ I D KAPG DGL + F+K W I+G D V
Sbjct: 796 PIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKI 855
Query: 435 FF 440
FF
Sbjct: 856 FF 857
Score = 37.7 bits (86), Expect(3) = 1e-24
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTWFTLNKTL 165
E ++QKSR Q ++ D N+ +FHA K R S N ++T+K +G + +K +
Sbjct: 715 ERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEI 767
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 80.5 bits (197), Expect(3) = 1e-24
Identities = 33/84 (39%), Positives = 60/84 (71%)
Frame = +1
Query: 436 FFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDFL 615
FF + M ++IN T++ +IPK+ +PE++ +Y PI+ C+ LYKII K + RL+ +D +
Sbjct: 836 FFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIV 895
Query: 616 DNCQSAFVPDRII*DNIIMGHELV 687
+ Q+AF+P R++ DN+++ HE++
Sbjct: 896 SDSQAAFIPGRLVNDNVMIAHEMM 919
Score = 42.0 bits (97), Expect(3) = 1e-24
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 255 PILSRVQQLALIQPVTSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQ 434
PI++ L + ++ E+ A+ I D KAPG DGL + F+K W I+G D V
Sbjct: 776 PIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKI 835
Query: 435 FF 440
FF
Sbjct: 836 FF 837
Score = 37.7 bits (86), Expect(3) = 1e-24
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTWFTLNKTL 165
E ++QKSR Q ++ D N+ +FHA K R S N ++T+K +G + +K +
Sbjct: 695 ERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEI 747
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 79.7 bits (195), Expect(2) = 1e-24
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDF 612
+FF++GK+ K IN T V LIPKV P++M + PIS C+ KI KV+ L+ ++
Sbjct: 356 HFFKTGKLLKKINFTHVALIPKVHEPKNMTQLRPISLCNVFNKIGAKVLATHLKAILPTL 415
Query: 613 LDNCQSAFVPDRII*DNIIMGHELV-----KGYGRKG 708
+ + QSAF PDR I DN I+ EL+ K +GR+G
Sbjct: 416 ISDTQSAFAPDRAISDNSIVAFELLHMMHKKNHGRQG 452
Score = 60.1 bits (144), Expect(2) = 1e-24
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Frame = +3
Query: 114 NNIEILSRDMVH---SEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPILSRVQQLA 284
N I L + H +EQ + + + ++Q L S+ SS V+ G + + Q A
Sbjct: 249 NTISALEDEHGHWQTTEQGLTQTVVNYFQHLFSSIGSSDYTEVVDGVR-GRVTEEMNQ-A 306
Query: 285 LIQPVTSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
L+ T EE+++AL + KAPG D + F++K W I+G D AAVL FF
Sbjct: 307 LLAEFTPEEIKIALFQMHPSKAPGPDDFSPFFYQKYWQIVGEDMVAAVLHFF 358
>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
Length = 720
Score = 79.0 bits (193), Expect(2) = 1e-24
Identities = 38/84 (45%), Positives = 56/84 (66%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDF 612
NF G M N T V LIPKV++PE +K+ PIS C+ +YKI KV++ RL+ ++ +
Sbjct: 482 NFLNDGSMPAKWNETVVVLIPKVQNPERLKDLRPISLCNVIYKITSKVLSNRLKLILPEI 541
Query: 613 LDNCQSAFVPDRII*DNIIMGHEL 684
+ QSAFVP R+I DNI++ +E+
Sbjct: 542 ISQNQSAFVPGRLISDNILIAYEM 565
Score = 60.8 bits (146), Expect(2) = 1e-24
Identities = 35/99 (35%), Positives = 54/99 (54%)
Frame = +3
Query: 141 MVHSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPILSRVQQLALIQPVTSEEVQL 320
+V + ++E I +Y+ L + A Q VK ++S L++ T EEV+
Sbjct: 387 VVEEDGELETLITNYYRNLFTTNAGDRMDELLQHVKQ--VVSNEMNDQLLRDFTEEEVRQ 444
Query: 321 ALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQF 437
L++I D+KAPG DG++S F+KK W I+G D VL F
Sbjct: 445 GLDAIGDLKAPGADGMSSLFYKKHWNIVGADVVREVLNF 483
>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
thaliana] gi|7267156|emb|CAB77868.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 1077
Score = 77.0 bits (188), Expect(3) = 2e-24
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 436 FFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDFL 615
FF S + + IN T V LIPK+ +P+ + +Y PI+ CS YKII K++ RLQ ++ +
Sbjct: 450 FFISEILPQKINHTHVRLIPKIPAPQKVSDYRPIALCSVYYKIIAKLLAKRLQPILHSCI 509
Query: 616 DNCQSAFVPDRII*DNIIMGHE 681
QSAFVP R I DN+++ HE
Sbjct: 510 SENQSAFVPQRAISDNVLITHE 531
Score = 46.6 bits (109), Expect(3) = 2e-24
Identities = 29/107 (27%), Positives = 52/107 (48%)
Frame = +3
Query: 120 IEILSRDMVHSEQDIEKEIAGFYQELLGSVASSIPAINPQVVKDGPILSRVQQLALIQPV 299
IE + V+ + +I + I+ ++Q++ S ++ + + P ++ LI
Sbjct: 347 IENSAGTSVYEDSEIIETISDYFQDIFTSQEGDRTSVVAEALS--PCITTDMNNTLISLP 404
Query: 300 TSEEVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
T E++ A SI KAPG DG ++ FF+ W + + TA V FF
Sbjct: 405 TVAEIKQACLSIHPDKAPGRDGFSASFFQSNWSTVSEEITAEVQAFF 451
Score = 35.8 bits (81), Expect(3) = 2e-24
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGT 141
E+ +KQ+SR L L D NS +FHA +R + N+I +++ GT
Sbjct: 309 ETFWKQRSRNLWLALGDKNSCFFHAATNSRRAINTISVIENSAGT 353
>gb|ABF95850.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 84.7 bits (208), Expect(3) = 2e-24
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDF 612
NFF G M +N TS+ LIPKV PE +KE+ PIS C+ +YK++ K + RL+ ++ D
Sbjct: 196 NFFLQGVMLAGVNDTSIVLIPKVSKPEQLKEFRPISLCNVIYKVVSKCMVNRLRPILKDI 255
Query: 613 LDNCQSAFVPDRII*DNIIMGHELV 687
+ QSAF+P+R+I DN ++ E +
Sbjct: 256 ISVTQSAFIPERLITDNALIAFECI 280
Score = 45.4 bits (106), Expect(3) = 2e-24
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +3
Query: 144 VHSEQDIEKEIAGFYQELLGSVASSIP-----AINPQVVKDGPILSRVQQLALIQPVTSE 308
V +++++E F+Q L S P A+ P+V DG L +P + +
Sbjct: 102 VENKEEMEHMAREFFQTLYLKDNSVDPRELIDALTPRV-DDG------MNAGLCKPFSYD 154
Query: 309 EVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
E+ AL I +KAPG DG + FF++ W ++ ++ T AV FF
Sbjct: 155 EIADALFQIGPLKAPGPDGFPARFFQRNWAVLKKEVTTAVRNFF 198
Score = 28.9 bits (63), Expect(3) = 2e-24
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTWFTLNK 159
E ++ Q+SRV L+ D N+ +FH R N I LK+ + + F NK
Sbjct: 56 EIMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLKA-EDSRFVENK 105
>gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japonica Group]
Length = 850
Score = 84.7 bits (208), Expect(3) = 2e-24
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +1
Query: 433 NFFESGKMAKAINCTSVTLIPKVKSPESMKEY*PISCCSTLYKIICKVITMRLQEVMDDF 612
NFF G M +N TS+ LIPKV PE +KE+ PIS C+ +YK++ K + RL+ ++ D
Sbjct: 196 NFFLQGVMLAGVNDTSIVLIPKVSKPEQLKEFRPISLCNVIYKVVSKCMVNRLRPILKDI 255
Query: 613 LDNCQSAFVPDRII*DNIIMGHELV 687
+ QSAF+P+R+I DN ++ E +
Sbjct: 256 ISVTQSAFIPERLITDNALIAFECI 280
Score = 45.4 bits (106), Expect(3) = 2e-24
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +3
Query: 144 VHSEQDIEKEIAGFYQELLGSVASSIP-----AINPQVVKDGPILSRVQQLALIQPVTSE 308
V +++++E F+Q L S P A+ P+V DG L +P + +
Sbjct: 102 VENKEEMEHMAREFFQTLYLKDNSVDPRELIDALTPRV-DDG------MNAGLCKPFSYD 154
Query: 309 EVQLALNSIDDVKAPGCDGLNSCFFKKVWPIIGRDTTAAVLQFF 440
E+ AL I +KAPG DG + FF++ W ++ ++ T AV FF
Sbjct: 155 EIADALFQIGPLKAPGPDGFPARFFQRNWAVLKKEVTTAVRNFF 198
Score = 28.9 bits (63), Expect(3) = 2e-24
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 7 ESIYKQKSRVQ*LRLRDTNSAYFHANMKNRCSHNSIITLKSCQGTWFTLNK 159
E ++ Q+SRV L+ D N+ +FH R N I LK+ + + F NK
Sbjct: 56 EIMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLKA-EDSRFVENK 105