BLASTX nr result
ID: Atropa21_contig00040444
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040444
(604 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 89 3e-25
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 81 1e-22
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 82 2e-17
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 83 5e-14
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 58 8e-14
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 51 1e-13
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 54 2e-13
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 54 2e-13
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 55 4e-13
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 55 7e-13
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 55 9e-13
ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262... 57 2e-11
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 47 3e-11
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 54 3e-11
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 48 4e-11
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 50 4e-11
ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244... 57 6e-11
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 51 1e-10
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 50 2e-10
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A... 52 2e-10
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 88.6 bits (218), Expect(2) = 3e-25
Identities = 38/122 (31%), Positives = 72/122 (59%)
Frame = -1
Query: 370 IFQVVPSIIVWKLWKRMNTLRHGEKVSITKLIYQIMQTLVLFMRVRRKNFQYAPYRWNTM 191
I++ +P+II+W LWKR N L+H +S +++ +++ + ++ + + + W +
Sbjct: 623 IYKAIPAIIMWTLWKRRNALKHDSSISWERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAI 682
Query: 190 VEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQAQAK 11
++ L++Y + V+ K D ++K NT+G R N G SS+ FC+R+ GD+I A+AK
Sbjct: 683 IQRLNQYKRKIHVLRVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAK 742
Query: 10 EI 5
I
Sbjct: 743 GI 744
Score = 52.8 bits (125), Expect(2) = 3e-25
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGM----QCYCC*NFKVDDTFHVFLYTLVAQHVWKY 435
P KI+FFMWR+ K + DD LKK + +C+CC K + H+F + +W+Y
Sbjct: 531 PFKINFFMWRVWKRRIATDDNLKKMRINIVSRCWCCDRKKEETMTHLFPTAPITYKLWRY 590
Query: 434 FCRSVEIN 411
F IN
Sbjct: 591 FAHFAGIN 598
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 81.3 bits (199), Expect(2) = 1e-22
Identities = 38/127 (29%), Positives = 66/127 (51%)
Frame = -1
Query: 385 NYVRYIFQVVPSIIVWKLWKRMNTLRHGEKVSITKLIYQIMQTLVLFMRVRRKNFQYAPY 206
N + I + V ++I+W+LWKR N+ RHG++ + + YQ L + ++ + Y
Sbjct: 589 NKLSQILKAVLAVIMWELWKRRNSYRHGKETTYNNMYYQCQLILYQLVTIKFPWIKGLTY 648
Query: 205 RWNTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDII 26
W +V L Y P + + W+ NT+G S+ N SS+ +C+R+ NGD++
Sbjct: 649 HWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLL 708
Query: 25 QAQAKEI 5
A+A I
Sbjct: 709 YAEAHNI 715
Score = 51.2 bits (121), Expect(2) = 1e-22
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGM----QCYCC*NFKVDDTFHVFLYTLVAQHVWKY 435
PIKISFF+WR+ + K D LK+ + +CYCC +++ H+ L +AQ +WK
Sbjct: 502 PIKISFFLWRVWRRKIATYDNLKRMKIPVVSKCYCCKEGEMETMTHLLLTAPIAQKLWKQ 561
Query: 434 F 432
F
Sbjct: 562 F 562
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 81.6 bits (200), Expect(2) = 2e-17
Identities = 42/123 (34%), Positives = 66/123 (53%)
Frame = -1
Query: 370 IFQVVPSIIVWKLWKRMNTLRHGEKVSITKLIYQIMQTLVLFMRVRRKNFQYAPYRWNTM 191
+ +VVP++++W LWKR N L+HG S L+Y++ L R Q P +W+ +
Sbjct: 83 LMRVVPTVVIWNLWKRRNNLKHGRPSSYNNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDI 142
Query: 190 VEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQAQAK 11
V L K+ P + + K + + NT+ SR N SS+ FC+RN GD++ Q K
Sbjct: 143 VACLEKHKPKLYYLPVCWKPPE-GILTCNTDVASRCNPEISSYGFCLRNSVGDLVYVQGK 201
Query: 10 EIE 2
EI+
Sbjct: 202 EIQ 204
Score = 33.1 bits (74), Expect(2) = 2e-17
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3
Query: 581 MWRL*KSKFPLDDTLKKWGM----QCYCC*NFKVDDTFHVFLYTLVAQHVWKYFCRSVEI 414
MW K K P+D+ ++ G+ +C+CC K + H+FL A +W F I
Sbjct: 1 MW---KFKVPVDEVVQSMGINLVSRCWCCIQSKSETMSHLFLTFYTAAKLWILFANVAGI 57
Query: 413 N 411
+
Sbjct: 58 S 58
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 83.2 bits (204), Expect = 5e-14
Identities = 43/98 (43%), Positives = 64/98 (65%)
Frame = -1
Query: 298 KVSITKLIYQIMQTLVLFMRVRRKNFQYAPYRWNTMVEALSKYNPVVRVINAILKSIDTR 119
++S ++LI+QI+ L ++ RR++ ++ PY W +VEAL+ YN +V I K+ DT
Sbjct: 3120 EMSSSRLIFQIIAYSGLLIKTRRRSRKHVPYNWRIVVEALNNYNLKAKVTKVIWKAPDTG 3179
Query: 118 WIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQAQAKEI 5
IK+ T + RSSWVFCVR+ GDI+QAQA+EI
Sbjct: 3180 QIKIKT------DPRRSSWVFCVRDEQGDILQAQAQEI 3211
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 57.8 bits (138), Expect(2) = 8e-14
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWG---MQCYCC*NFKVDDTFHVFLYTLVAQHVWKYF 432
P KISFF+WR + K P D L+K+G CYCC +DD H+ + A ++WKY+
Sbjct: 609 PFKISFFIWRALRGKLPTYDYLQKFGSNATDCYCCNRKGIDDINHILITGNFANYIWKYY 668
Query: 431 CRSVEIN*RTCNLVS*LCQ 375
+ I +L S L Q
Sbjct: 669 APTFGITQINIDLRSLLLQ 687
Score = 45.1 bits (105), Expect(2) = 8e-14
Identities = 23/103 (22%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEKV-SITKLIYQIMQTLVLFMRVRRKNFQYAPYRW 200
+ + ++P+ I W LWK M +++G K+ SI ++ Y I + ++ +++ N + + W
Sbjct: 699 KLLISILPNFICWHLWKNMCAVKYGNKISSIQRVQYGIFKDVMQTIKIVFPNIPW-QHSW 757
Query: 199 NTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGR 71
++ + + ++VI + K+NT+G++ SG+
Sbjct: 758 YRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGK 800
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 51.2 bits (121), Expect(2) = 1e-13
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ----CYCC*NFKVDDTFHVFLYTLVAQHVWKY 435
P K++FF+WRL K + DD LK+ +Q C+CC + + H+FL +A +W+
Sbjct: 908 PFKMNFFLWRLWKRRIATDDNLKRMKIQIVSRCWCCSETEEETMTHIFLTAPIANRLWRQ 967
Query: 434 F 432
F
Sbjct: 968 F 968
Score = 50.8 bits (120), Expect(2) = 1e-13
Identities = 33/125 (26%), Positives = 54/125 (43%)
Frame = -1
Query: 379 VRYIFQVVPSIIVWKLWKRMNTLRHGEKVSITKLIYQIMQTLVLFMRVRRKNFQYAPYRW 200
++ + + +P+II+W LWKR N +H + ++++ Q+ + P R
Sbjct: 997 LKVVMRAMPTIIMWTLWKRRNNFKHRGTTTYSEVVMQVQEE--------------KPGR- 1041
Query: 199 NTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQA 20
+K NT+G +R NSG SS F VR+ GD+I A
Sbjct: 1042 --------------------------NKVKCNTDGAARGNSGASSTSFVVRDEEGDLIYA 1075
Query: 19 QAKEI 5
+AK I
Sbjct: 1076 RAKGI 1080
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 53.9 bits (128), Expect(2) = 2e-13
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ---CYCC*NFKVDDTFHVFLYTLVAQHVWKYF 432
P K+SFF+WR + K P ++ L++ G CYCC N DD H+ + A+++WK +
Sbjct: 1108 PFKVSFFIWRALRGKLPTNENLQRIGKNLSDCYCCYNKGKDDINHILINGNFAKYIWKIY 1167
Query: 431 CRSVEI 414
+V +
Sbjct: 1168 SSAVGV 1173
Score = 47.4 bits (111), Expect(2) = 2e-13
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEK-VSITKLIYQIMQTLVLFMRVRRKNFQYAPYR- 203
+ + ++P+ I W LWK +++G K SI ++ Y I + + M+V F P++
Sbjct: 1198 KLLIHILPNFICWNLWKNRCAVKYGLKNSSIYRVQYGIFKNI---MQVITIVFPSIPWQT 1254
Query: 202 -WNTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDII 26
WN ++ + + +++ D K+NT+G++ +NSG+ +R+ G II
Sbjct: 1255 SWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKII 1314
Query: 25 QA 20
A
Sbjct: 1315 YA 1316
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 53.9 bits (128), Expect(2) = 2e-13
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWG---MQCYCC*NFKVDDTFHVFLYTLVAQHVWK 438
P KI+FF+WR K K P ++ L+++G +CYCC + DD H+ + A+H+WK
Sbjct: 915 PFKIAFFIWRALKGKLPTNELLQRFGSAISKCYCCYSKGKDDINHILINGNFAKHIWK 972
Score = 47.4 bits (111), Expect(2) = 2e-13
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEK-VSITKLIYQIMQTLVLFMRVRRKNFQYAPYR- 203
+ + ++P++I W LWK +++G K SI ++ Y I + + M+V + F P++
Sbjct: 1005 KLLIHILPNVICWNLWKNRCAVKYGNKSSSIHRVQYGIFKDV---MQVIKIVFPSIPWQS 1061
Query: 202 -WNTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDII 26
WN ++ + +++ K+NT+G++ +NSG+ +R+ G I+
Sbjct: 1062 SWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIV 1121
Query: 25 QA 20
A
Sbjct: 1122 YA 1123
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 55.5 bits (132), Expect(2) = 4e-13
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGM---QCYCC*NFKVDDTFHVFLYTLVAQHVWKYF 432
P K+SFF+W+ ++K P +D+L +GM +CYCC DD H+ + A+++WK
Sbjct: 664 PFKVSFFIWKALRNKLPTNDSLMNFGMDEQECYCCFRKGKDDILHILITGNFAKYIWKIH 723
Query: 431 CRSVEIN*RTCNLVS 387
+ ++ NL S
Sbjct: 724 ATRLGVHQDHANLRS 738
Score = 45.1 bits (105), Expect(2) = 4e-13
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEKVSITKLI-YQIMQ-----TLVLFMRVRRKNFQY 215
+ ++Q++P+ I W LWK ++HG K T+ + Y I + +V F + R+N
Sbjct: 754 KLLYQILPNFICWNLWKNRCAVKHGSKQCSTQRVQYAIFKDTMQAVMVAFPNISRQN--- 810
Query: 214 APYRWNTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNG 35
+ ++ V+V + + K+NT+G++ N + +R+ NG
Sbjct: 811 ---NLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNG 867
Query: 34 DIIQAQA 14
+I A A
Sbjct: 868 KLIYAFA 874
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 55.1 bits (131), Expect(2) = 7e-13
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = -1
Query: 370 IFQVVPSIIVWKLWKRMNTLRHGEKVS-ITKLIYQIMQTLVLFMRVRRKNFQYAPYRWNT 194
+ Q P I W LWK ++G K + I+++ Y + + M+ + Q+ P W
Sbjct: 521 LLQATPIFICWNLWKNRCACKYGGKATNISRVKYVVYKDNFKMMKNAFPHIQW-PAHWTA 579
Query: 193 MVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQAQA 14
++ K +V + WIK+NT+G++ N G+ +RN G ++ A A
Sbjct: 580 LIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKIGAGGIIRNKEGKLVMAFA 639
Query: 13 KEI 5
+
Sbjct: 640 TSL 642
Score = 44.7 bits (104), Expect(2) = 7e-13
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ---CYCC*N-FKVDDTFHVFLYTLVAQHVWKY 435
P K SF +WR+ K K P ++ L +G++ CYCC + +D H+F A VWK
Sbjct: 428 PFKTSFLLWRILKGKIPTNEKLTNFGIEPSPCYCCVDRAGMDSINHIFNTGNFAGRVWKS 487
Query: 434 F 432
F
Sbjct: 488 F 488
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 54.7 bits (130), Expect(2) = 9e-13
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = -1
Query: 370 IFQVVPSIIVWKLWKRMNTLRHGEKVS-ITKLIYQIMQTLVLFMRVRRKNFQYAPYRWNT 194
+ Q P I W LWK ++G K + I+++ Y + + M+ + Q+ P W
Sbjct: 521 LLQATPIFICWNLWKNRCACKYGGKATNISRVKYAVYKDNFKMMKNAFPHIQW-PAHWTA 579
Query: 193 MVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQAQA 14
++ K +V + WIK+NT+G++ N G +RN G ++ A A
Sbjct: 580 LIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIGAGGIIRNKEGKLVMAFA 639
Query: 13 KEI 5
+
Sbjct: 640 TSL 642
Score = 44.7 bits (104), Expect(2) = 9e-13
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ---CYCC*N-FKVDDTFHVFLYTLVAQHVWKY 435
P K SF +WR+ K K P ++ L +G++ CYCC + +D H+F A VWK
Sbjct: 428 PFKTSFLLWRILKGKIPTNEKLTNFGIEPSPCYCCVDRAGMDSINHIFNTGNFAGRVWKS 487
Query: 434 F 432
F
Sbjct: 488 F 488
>ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum
lycopersicum]
Length = 764
Score = 57.4 bits (137), Expect(2) = 2e-11
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGM---QCYCC*NFKVDDTFHVFLYTLVAQHVWKYF 432
P KISFF+WR K K P +D L+ +G +CYCC DD H+ A ++WKY+
Sbjct: 596 PFKISFFIWRAIKGKLPTNDNLQIFGKPAEECYCCYKQGKDDINHILSTGHFANYIWKYY 655
Query: 431 CRSVEI 414
R + +
Sbjct: 656 ARKLGV 661
Score = 37.4 bits (85), Expect(2) = 2e-11
Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = -1
Query: 379 VRYIFQVVPSIIVWKLWKRMNTLRHGEK-VSITKLIYQIMQTLVLFMRV 236
++ +FQ++P+II W LWK +++G K SI ++ Y I + ++ ++V
Sbjct: 685 LKTLFQILPNIICWNLWKNRCAVKYGNKRSSINRVQYGIYKDVMQIIKV 733
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 47.4 bits (111), Expect(2) = 3e-11
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEKVSITKLIYQIMQTLVLFMRVRRKNFQYA--PYR 203
+ I P I W LWK +++G K S + ++ ++ ++ F Y P R
Sbjct: 991 KLILHSTPIFICWNLWKNRCAVKYGGKQSNIARVKHLV--ILDNFKLLHTVFPYISWPLR 1048
Query: 202 WNTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQ 23
WN + + +V RW+K+NT+G++ N G +RN G+II
Sbjct: 1049 WNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIIL 1108
Query: 22 A 20
A
Sbjct: 1109 A 1109
Score = 47.0 bits (110), Expect(2) = 3e-11
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ---CYCC*NFKVDDTFHVFLYTLVAQHVWKYF 432
P K SF +WR + K P ++ L +G++ C+CC + +D H A++VWKYF
Sbjct: 901 PFKCSFLLWRAIRGKLPTNEKLLSFGIEPSDCHCCHSPGIDTIEHTLNSGDFAKNVWKYF 960
Query: 431 CRSVEI 414
S+ I
Sbjct: 961 AISLGI 966
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEKVS-ITKLIYQIMQTLVLFMRVRRKNFQYAPYRW 200
R I Q P I W LWK ++G K S I+++ Y I + M ++ P W
Sbjct: 695 RLILQATPIFICWNLWKNRCASKYGGKQSNISRVKYAIYKDNYKLMTTTFPQIKW-PSNW 753
Query: 199 NTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGR 71
+++ + +V +W+K+NT+G++ N GR
Sbjct: 754 MELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGR 796
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ---CYCC*NFKVDDTF-HVFLYTLVAQHVWKY 435
P K SF +WR + K P ++ L +G + C+CC N DT H F A ++WK
Sbjct: 604 PFKTSFLLWRTLRGKLPTNEKLISFGNEPANCFCCCNRSGLDTIEHTFNKGQFATYLWKS 663
Query: 434 FCRSVEI 414
F + I
Sbjct: 664 FAAAAGI 670
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 53.5 bits (127), Expect(2) = 3e-11
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWG---MQCYCC*NFKVDDTFHVFLYTLVAQHVWKYF 432
P K SFF+WR +SK P ++ L K+G ++CYCC DD H+ + A+++WK
Sbjct: 43 PFKTSFFIWRALRSKLPTNENLLKFGKEELECYCCYRKGKDDLKHILITGNFAKYIWKIH 102
Query: 431 CRSVEIN*RTCNLVS 387
+ + I NL S
Sbjct: 103 TKRLGIAIVNTNLRS 117
Score = 40.4 bits (93), Expect(2) = 3e-11
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEKVSITKLIYQIMQTLVL-FMRVRRKNFQYAPYR- 203
+ I ++P+II W LWK + ++G K S IY++ + M++ + + P++
Sbjct: 133 KLILHILPNIICWNLWKNRCSAKYGNKPS---SIYRVESGIFKDIMQIIKAVYPNIPWQS 189
Query: 202 -WNTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDII 26
W + + + ++V + K+NT+G+++ N+G+ +R+ G +I
Sbjct: 190 SWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLI 249
Query: 25 QAQA 14
A A
Sbjct: 250 YAFA 253
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 47.8 bits (112), Expect(2) = 4e-11
Identities = 28/122 (22%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEKVS-ITKLIYQIMQTLVLFMRVRRKNFQYAPYR- 203
+ + ++P++I W LWK +++G+K S + ++ Y I + + M++ + F P++
Sbjct: 459 KLLIHILPNLICWNLWKNRCAVKYGKKRSNVHRVKYGIFKEV---MQIIKLVFPSIPWQA 515
Query: 202 -WNTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDII 26
WN +V + + +++ K+NT+G++ +NSG++ +R+ G I+
Sbjct: 516 NWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQGKIV 575
Query: 25 QA 20
A
Sbjct: 576 YA 577
Score = 45.8 bits (107), Expect(2) = 4e-11
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWG---MQCYCC*NFKVDDTFHVFLYTLVAQHVWKYF 432
P KI+FF+WR K K P ++ L++ G C CC DD H+ + A+++WK
Sbjct: 369 PFKIAFFIWRALKGKLPTNEFLQRIGSNISDCSCCYRKGKDDINHILINGNFAKYIWKIH 428
Query: 431 CRSVEI 414
++ I
Sbjct: 429 AATLGI 434
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 50.4 bits (119), Expect(2) = 4e-11
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEK-VSITKLIYQIMQTLVLFMRVRRKNFQYAPYRW 200
+ + Q P I W LWK ++G K +I+++ Y I + ++ + + P W
Sbjct: 212 KLLLQATPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNSFPSINW-PANW 270
Query: 199 NTMVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQA 20
T++ K ++V +WIK+NT+G++ N G+ +R+ G +I A
Sbjct: 271 TTLILTSEKCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMA 330
Score = 43.1 bits (100), Expect(2) = 4e-11
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ---CYCC*NFKVDDTF-HVFLYTLVAQHVWKY 435
P K SF +WR K K P ++ L +G++ C+CC + DT H+F A VW +
Sbjct: 121 PFKTSFLLWRTLKGKLPTNEKLSNFGIEPLPCFCCFDRAGMDTIEHIFNSGPFATIVWNF 180
Query: 434 FCRSVEI 414
F + I
Sbjct: 181 FAATAGI 187
>ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244169 [Solanum
lycopersicum]
Length = 764
Score = 56.6 bits (135), Expect(2) = 6e-11
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGM---QCYCC*NFKVDDTFHVFLYTLVAQHVWKYF 432
P KISFF+WR + K P +D+L+ +G +CYCC DD H+ A ++WKY+
Sbjct: 596 PFKISFFIWRAIRGKLPTNDSLQIFGKPAEECYCCYKQGKDDINHILSTGHFANYIWKYY 655
Query: 431 CRSVEI 414
R + +
Sbjct: 656 ARKLGV 661
Score = 36.6 bits (83), Expect(2) = 6e-11
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -1
Query: 379 VRYIFQVVPSIIVWKLWKRMNTLRHGEK-VSITKLIYQIMQTLVLFMRV 236
++ +FQ++P+II W LWK +++G K SI + Y I + ++ ++V
Sbjct: 685 LKTLFQILPNIICWNLWKNRCAVKYGNKRSSINRAQYGIYKDVMQIIKV 733
>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
lycopersicum]
Length = 1531
Score = 51.2 bits (121), Expect(2) = 1e-10
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGM---QCYCC*NFKVDDTFHVFLYTLVAQHVWKY 435
P K++FF+WR + K P ++ + ++G+ CYCC DD H+ L A ++WKY
Sbjct: 1284 PFKVAFFIWRALRGKLPTNEGVHRFGIAAEDCYCCYQQGKDDINHILLTRNFANYIWKY 1342
Score = 40.8 bits (94), Expect(2) = 1e-10
Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = -1
Query: 376 RYIFQVVPSIIVWKLWKRMNTLRHGEKV-SITKLIYQIMQTLVLFMRVRRKNFQYAPYRW 200
+ I Q++P+ I W LWK +++G K SI ++ Y I + + M+V R + P++
Sbjct: 1374 KLIMQILPNYICWNLWKNRCGVKYGHKTSSIKRVQYGIFKDI---MQVIRLVYPIIPWQS 1430
Query: 199 NT--MVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDII 26
+ +++ + ++I + K+NT+G++ +++G+ +R+ G II
Sbjct: 1431 SLYHLIKTAEHCHQQYKIIMVSWQKPKEGIYKLNTDGSAIQDTGKIGGGGILRDHTGKII 1490
Query: 25 QA 20
A
Sbjct: 1491 YA 1492
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 50.4 bits (119), Expect(2) = 2e-10
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = -1
Query: 370 IFQVVPSIIVWKLWKRMNTLRHGEK-VSITKLIYQIMQTLVLFMRVRRKNFQYAPYRWNT 194
+ Q +P IVW LWK ++G K +I+++ Y I + ++ + P W
Sbjct: 417 LLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCINW-PGNWAA 475
Query: 193 MVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQAQA 14
+++ + ++V +WIK+NT+G++ N+G +R+ G I+ A A
Sbjct: 476 LIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFA 535
Score = 41.2 bits (95), Expect(2) = 2e-10
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ---CYCC*N-FKVDDTFHVFLYTLVAQHVWKY 435
P K SF +WR+ K K P ++ L +G++ C+CC + +D H F A VW+
Sbjct: 324 PFKSSFLLWRVLKGKLPTNEKLSNFGIEPSSCFCCVDRTGMDSIEHTFNSGSFATRVWRA 383
Query: 434 F 432
F
Sbjct: 384 F 384
>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 375
Score = 51.6 bits (122), Expect(2) = 2e-10
Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = -1
Query: 370 IFQVVPSIIVWKLWKRMNTLRHGEK-VSITKLIYQIMQTLVLFMRVRRKNFQYAPYRWNT 194
+ Q +P IVW LWK ++G K +I+++ Y + + +++ + P W
Sbjct: 146 LLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAVYKDTFKMLKIAFPRVNW-PGNWAA 204
Query: 193 MVEALSKYNPVVRVINAILKSIDTRWIKVNTNGTSRKNSGRSSWVFCVRNPNGDIIQAQA 14
+++ + ++V +WIK+NT+G++ N+G +R+ G ++ A A
Sbjct: 205 LIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKMVLAFA 264
Score = 40.0 bits (92), Expect(2) = 2e-10
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = -3
Query: 602 PIKISFFMWRL*KSKFPLDDTLKKWGMQ---CYCC*N-FKVDDTFHVFLYTLVAQHVWKY 435
P K SF +WR+ K K P ++ L + ++ C+CC + ++D H F A VW+
Sbjct: 53 PFKSSFLLWRVLKGKLPTNEKLSNFSIEPSSCFCCVDRTRMDSIEHTFNSGSFATKVWRA 112
Query: 434 F 432
F
Sbjct: 113 F 113