BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040430
         (516 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006657175.1| PREDICTED: putative ribonuclease H protein A...    57   3e-06
ref|XP_006360398.1| PREDICTED: uncharacterized protein LOC102602...    57   3e-06
ref|NP_001176619.1| Os11g0573700 [Oryza sativa Japonica Group] g...    56   4e-06
ref|NP_001045695.2| Os02g0118800 [Oryza sativa Japonica Group] g...    56   4e-06
gb|EEE56186.1| hypothetical protein OsJ_05139 [Oryza sativa Japo...    56   4e-06
gb|EEE52314.1| hypothetical protein OsJ_34329 [Oryza sativa Japo...    56   4e-06
gb|ABA94403.2| retrotransposon protein, putative, unclassified [...    56   4e-06

>ref|XP_006657175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Oryza
           brachyantha]
          Length = 523

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +3

Query: 282 LIWSRILQPKPMFVLWLAAQGKLLTKDRMVAMGM-HCDGIGCVLCELDSI*DTHHLFLHC 458
           LIW      +  F +WLA +G++LT + +   G  H D   CVLC      D HHLFL C
Sbjct: 368 LIWRSKAPGRVKFFIWLAVRGRVLTSNNLCKRGWTHQDR--CVLCNAHQE-DGHHLFLGC 424

Query: 459 TWSNKLWNGMQGWT 500
           T++ ++WN  + WT
Sbjct: 425 TYTRRVWNKTRNWT 438


>ref|XP_006360398.1| PREDICTED: uncharacterized protein LOC102602440 [Solanum tuberosum]
          Length = 170

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +3

Query: 285 IWSRILQPKPMFVLWLAAQGKLLTKDRMVAMGMHCDGIGCVLCELDSI*DTHHLFLHCTW 464
           ++  + +PK +F  WL   G+LLT DR++  GM  D    + C+ +      HLF+HC +
Sbjct: 1   MYKNVARPKAIFTTWLLMWGRLLTTDRLIKWGMQIDPKCPLCCKHEE--TKEHLFVHCDY 58

Query: 465 SNKLWNGMQGWT 500
           + ++W  M  WT
Sbjct: 59  AKQIWIKMDNWT 70


>ref|NP_001176619.1| Os11g0573700 [Oryza sativa Japonica Group]
           gi|255680204|dbj|BAH95347.1| Os11g0573700 [Oryza sativa
           Japonica Group]
          Length = 700

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = +3

Query: 276 SVLIWSRILQPKPMFVLWLAAQGKLLTKDRMVAMGMHCDGIGCVLCELDSI*DTHHLFLH 455
           S LIW      +  F LWLAA+G+ LT D +   G   +   C LC+ ++  D  HLF+ 
Sbjct: 540 SELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDC-CSLCQSEAE-DCLHLFVT 597

Query: 456 CTWSNKLWNGMQGWTGMH 509
           C ++ ++W  MQGW G++
Sbjct: 598 CAFTRRVWRMMQGWIGIN 615


>ref|NP_001045695.2| Os02g0118800 [Oryza sativa Japonica Group]
           gi|255670550|dbj|BAF07609.2| Os02g0118800 [Oryza sativa
           Japonica Group]
          Length = 212

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = +3

Query: 276 SVLIWSRILQPKPMFVLWLAAQGKLLTKDRMVAMGMHCDGIGCVLCELDSI*DTHHLFLH 455
           S LIW      +  F LWLAA+G+ LT D +   G   +   C LC+ ++  D  HLF+ 
Sbjct: 52  SELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDC-CSLCQSEAE-DCLHLFVT 109

Query: 456 CTWSNKLWNGMQGWTGMH 509
           C ++ ++W  MQGW G++
Sbjct: 110 CAFTRRVWRMMQGWIGIN 127


>gb|EEE56186.1| hypothetical protein OsJ_05139 [Oryza sativa Japonica Group]
          Length = 1394

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = +3

Query: 276 SVLIWSRILQPKPMFVLWLAAQGKLLTKDRMVAMGMHCDGIGCVLCELDSI*DTHHLFLH 455
           S LIW      +  F LWLAA+G+ LT D +   G   +   C LC+ ++  D  HLF+ 
Sbjct: 512 SELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDC-CSLCQSEAE-DCLHLFVT 569

Query: 456 CTWSNKLWNGMQGWTGMH 509
           C ++ ++W  MQGW G++
Sbjct: 570 CAFTRRVWRMMQGWIGIN 587


>gb|EEE52314.1| hypothetical protein OsJ_34329 [Oryza sativa Japonica Group]
          Length = 366

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = +3

Query: 276 SVLIWSRILQPKPMFVLWLAAQGKLLTKDRMVAMGMHCDGIGCVLCELDSI*DTHHLFLH 455
           S LIW      +  F LWLAA+G+ LT D +   G   +   C LC+ ++  D  HLF+ 
Sbjct: 206 SELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDC-CSLCQSEAE-DCLHLFVT 263

Query: 456 CTWSNKLWNGMQGWTGMH 509
           C ++ ++W  MQGW G++
Sbjct: 264 CAFTRRVWRMMQGWIGIN 281


>gb|ABA94403.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 933

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = +3

Query: 276  SVLIWSRILQPKPMFVLWLAAQGKLLTKDRMVAMGMHCDGIGCVLCELDSI*DTHHLFLH 455
            S LIW      +  F LWLAA+G+ LT D +   G   +   C LC+ ++  D  HLF+ 
Sbjct: 773  SELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDC-CSLCQSEAE-DCLHLFVT 830

Query: 456  CTWSNKLWNGMQGWTGMH 509
            C ++ ++W  MQGW G++
Sbjct: 831  CAFTRRVWRMMQGWIGIN 848