BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040412
         (633 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containi...   240   2e-61
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   149   5e-34
gb|ESW30051.1| hypothetical protein PHAVU_002G120500g [Phaseolus...   148   1e-33
ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containi...   137   3e-30
gb|EOY32970.1| Pentatricopeptide repeat-containing protein, puta...   136   4e-30
ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citr...   134   2e-29
ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutr...   133   5e-29
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...   133   5e-29
ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Caps...   130   3e-28
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
gb|AFK33630.1| unknown [Lotus japonicus]                              126   5e-27
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]   124   3e-26
ref|NP_174459.1| pentatricopeptide repeat-containing protein [Ar...   121   1e-25
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,...   119   6e-25
gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis]     117   2e-24
ref|XP_002893686.1| pentatricopeptide repeat-containing protein ...   116   6e-24
ref|XP_004292904.1| PREDICTED: pentatricopeptide repeat-containi...    95   2e-17
ref|XP_002461747.1| hypothetical protein SORBIDRAFT_02g007340 [S...    88   2e-15
ref|NP_001131386.1| hypothetical protein [Zea mays] gi|194691388...    80   5e-13
ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12

>ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Solanum lycopersicum]
          Length = 465

 Score =  240 bits (613), Expect = 2e-61
 Identities = 116/153 (75%), Positives = 128/153 (83%)
 Frame = -2

Query: 461 MDNLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGC 282
           MD+LG NIPVD+YVSLIKECTESRDP  AVE+  H+CKS+VIPS          LV CGC
Sbjct: 1   MDSLGFNIPVDVYVSLIKECTESRDPLNAVEVYEHVCKSDVIPSLPLLNRLLLMLVLCGC 60

Query: 281 FEHVRQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGI 102
           FE  RQLFDKMRVRNS+SWAA+IAGCVEN E  GALRLFMEMQSE GNLCKCGD+IDDGI
Sbjct: 61  FEQARQLFDKMRVRNSQSWAAMIAGCVENGECVGALRLFMEMQSEAGNLCKCGDLIDDGI 120

Query: 101 LVCVLKACVETMNLDLGKQIHGCLLKLGSCESL 3
           LVCVLKACVE MNL+ G+QIHG LLKLG+CES+
Sbjct: 121 LVCVLKACVELMNLEFGRQIHGWLLKLGNCESM 153


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  149 bits (377), Expect = 5e-34
 Identities = 81/203 (39%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
 Frame = -2

Query: 584 NTPLQFQLPLNRPHHKLHQPIKPEI-----------KKTTNPSCTISDILRLMDNLGLNI 438
           N  L+F+LPL  P H       P+            KK      T SDIL LM+ L   +
Sbjct: 36  NHQLEFRLPLRHPIHNFPNHTSPQPLTQTTTFTKKKKKKKRKGATTSDILHLMEALPFPV 95

Query: 437 PVDIYVSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFEHVRQLF 258
           P+DIY SLIKECT S DP  A+EL  HI KS + P            VSCG  E+ R +F
Sbjct: 96  PIDIYTSLIKECTVSGDPETAIELATHISKSGIKPPLPFLNRILVMFVSCGLLENARHMF 155

Query: 257 DKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGILVCVLKAC 78
           DKMRVR+  +WA +     +N++YE A  +F+ M ++ G +          I  C+L+AC
Sbjct: 156 DKMRVRDFNTWATLFVAYYDNTDYEEATNVFVNMLTQLGMM-----EFPPWIWACLLRAC 210

Query: 77  VETMNLDLGKQIHGCLLKLGSCE 9
             T+N+ LG Q+HG LLKLG+C+
Sbjct: 211 ACTVNVPLGMQVHGWLLKLGTCD 233


>gb|ESW30051.1| hypothetical protein PHAVU_002G120500g [Phaseolus vulgaris]
          Length = 420

 Score =  148 bits (374), Expect = 1e-33
 Identities = 88/212 (41%), Positives = 114/212 (53%), Gaps = 8/212 (3%)
 Frame = -2

Query: 620 KKWLPITIHSISNTPLQFQLPLNRPHHKLHQPIKP--------EIKKTTNPSCTISDILR 465
           K   P T+ S S+  L+   PL  P H   +P+ P        EIKK      T  DIL 
Sbjct: 25  KNHKPRTLSSPSHQ-LELLPPLRYPIHTFPRPLIPQTTTFTKKEIKKKKRKEATTLDILH 83

Query: 464 LMDNLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCG 285
           LMD L   I +DIY SLIKECT S DP  A+EL  HI KS++ P            VSCG
Sbjct: 84  LMDALPFPITIDIYTSLIKECTVSGDPETAIELYTHISKSDIKPPLPFLNRILIMFVSCG 143

Query: 284 CFEHVRQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDG 105
             E+ R +F+KMRVR+  SWA +     +N+EYE A  +F+ M  + G L          
Sbjct: 144 MLENARHMFEKMRVRDFNSWATLFVAYYDNAEYEEATAVFVNMLGQLGML-----QFPPW 198

Query: 104 ILVCVLKACVETMNLDLGKQIHGCLLKLGSCE 9
           I  C+L+AC  T+N+ LG Q+HG LLKLG+C+
Sbjct: 199 IWACLLRACACTLNVPLGLQVHGWLLKLGACD 230


>ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Cicer arietinum]
          Length = 418

 Score =  137 bits (345), Expect = 3e-30
 Identities = 85/213 (39%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
 Frame = -2

Query: 587 SNTPLQFQLP------LNRPHHKLHQPIK---PEIKKTTN-------PSCTISDILRLMD 456
           SN  L  +LP      +N PHH   QP+    P  K  T         S T S IL LMD
Sbjct: 23  SNHQLHLRLPFRNPKLINFPHHPSSQPLTVTPPRNKNNTKNKNNNKRKSATTSHILPLMD 82

Query: 455 NLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFE 276
            L   IP+DIY SL+KECT S DP  A EL +HI +S + P            VSCG  +
Sbjct: 83  ALHFPIPIDIYTSLVKECTLSGDPETATELHSHITRSGIGPPLTLLNRILIMFVSCGLLQ 142

Query: 275 HVRQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGIL- 99
             R +FD+M VRN  SWA +     ENS+YE A+ +FM M  + G       +++   L 
Sbjct: 143 SARHVFDEMPVRNFHSWAILFVAYYENSDYENAIDVFMRMLRQLG-------VMEFPFLP 195

Query: 98  ---VCVLKACVETMNLDLGKQIHGCLLKLGSCE 9
               C+L AC  T+N+ LG Q+HG L KLG+C+
Sbjct: 196 WFWSCLLTACACTVNVPLGMQVHGSLTKLGACD 228


>gb|EOY32970.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 413

 Score =  136 bits (343), Expect = 4e-30
 Identities = 83/194 (42%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
 Frame = -2

Query: 575 LQFQLPLNRPHHKLHQPIKPEIKKTTNP-------SCTISDILRLMDNLGLNIPVDIYVS 417
           L  QLPL         P  P    T+ P       S T SDILRLMD+L L IP DIY S
Sbjct: 39  LHSQLPLRITKQSSKTPPPPTPISTSKPISSNPCSSHTTSDILRLMDSLSLPIPPDIYAS 98

Query: 416 LIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRVRN 237
           L+KECT +R   +A+EL +HI  S + PS           VSCG  +  R LFD+M +R+
Sbjct: 99  LVKECTVTRHSRRALELHSHIRNSRIKPSLPLLNRLLLMHVSCGHLDIARHLFDQMLLRD 158

Query: 236 SKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGILVCVLKACVETMNLD 57
             SWA +I  C+   + E A+  F+ M+     L KC       I+VC+LK+CV T N+ 
Sbjct: 159 FNSWAIMIVACLHAGDSEQAIAYFVRMERH-NLLFKC----PSWIIVCLLKSCVVTKNMG 213

Query: 56  LGKQIHGCLLKLGS 15
           LGKQ+HG LLKLG+
Sbjct: 214 LGKQVHGQLLKLGA 227


>ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citrus clementina]
           gi|557539679|gb|ESR50723.1| hypothetical protein
           CICLE_v10033975mg [Citrus clementina]
          Length = 425

 Score =  134 bits (337), Expect = 2e-29
 Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 11/199 (5%)
 Frame = -2

Query: 566 QLPLNRPHHKLHQPIKPEIKKTTN--------PSCTIS-DILRLMDNLGLNIPVDIYVSL 414
           QLPL  P     +P KP +K ++N        P+ T S +IL LMDNL L I  D+Y  L
Sbjct: 38  QLPLRSP-----KPTKP-LKTSSNWRETTQSIPANTSSANILHLMDNLCLPITTDMYTCL 91

Query: 413 IKECTESRDPSKAVELCNHICKS-NVIPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRVRN 237
           IKECT  +D + A EL NHI K  N+ P+           VSCG  +  RQLFD+M +R+
Sbjct: 92  IKECTFQKDSAGAFELLNHIRKRVNIKPTLLFLNRLLLMHVSCGQLDTARQLFDEMPLRD 151

Query: 236 SKSWAAIIAGCVENSEYEGALRLFMEMQS-ETGNLCKCGDIIDDGILVCVLKACVETMNL 60
             SWA +I G V+ ++Y+  + LF EM   + G++     +    I+VCVLKACV TMN+
Sbjct: 152 FNSWAVMIVGYVDVADYQECITLFAEMMKRKKGHMLL---VFPAWIIVCVLKACVCTMNM 208

Query: 59  DLGKQIHGCLLKLGSCESL 3
           +LGKQ+HG L KLGS  ++
Sbjct: 209 ELGKQVHGLLFKLGSSRNI 227


>ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutrema salsugineum]
           gi|557093074|gb|ESQ33656.1| hypothetical protein
           EUTSA_v10009456mg [Eutrema salsugineum]
          Length = 400

 Score =  133 bits (334), Expect = 5e-29
 Identities = 82/198 (41%), Positives = 107/198 (54%), Gaps = 7/198 (3%)
 Frame = -2

Query: 581 TPLQFQLPLNRPHHKLHQP---IKPEIK----KTTNPSCTISDILRLMDNLGLNIPVDIY 423
           T    QL L RP H++ +P   I+P+I+      +NP C+ SDILRLMD+L L    D+Y
Sbjct: 33  TNFDVQLFLRRPKHQISEPVVVIQPQIQIDRAPKSNPRCSTSDILRLMDSLSLPGNEDLY 92

Query: 422 VSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRV 243
             L KE T   D   A +L  HI  S+V P            VSCG  +  RQ+FDKM  
Sbjct: 93  SCLAKESTTECDQRGAYDLQVHIMNSSVRPRTTFLNRLLLMHVSCGRLDITRQMFDKMPQ 152

Query: 242 RNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGILVCVLKACVETMN 63
           R+  SWA +I GC+E  +Y+ A+ LF+ M      + K    I   I+ CVLKAC    +
Sbjct: 153 RDFHSWAIVILGCIEMGDYQDAVFLFVSMLKNQNRVSK----IPPWIMGCVLKACGMIRD 208

Query: 62  LDLGKQIHGCLLKLGSCE 9
           LDLGKQ+HG   KLG  E
Sbjct: 209 LDLGKQVHGLCQKLGFIE 226


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  133 bits (334), Expect = 5e-29
 Identities = 82/202 (40%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
 Frame = -2

Query: 587 SNTPLQFQLPLNRPH--------HKLHQPIKPEIKKTTNPSC-TISDILRLMDNLGLNIP 435
           ++ P   +LPL R          H   QPI P  K      C T S IL LMD L   I 
Sbjct: 30  NHQPHLLRLPLRRNPKPKNLSLIHPSSQPITPPKKSKRRRKCDTTSHILPLMDALHFPIT 89

Query: 434 VDIYVSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFEHVRQLFD 255
           +DIY SL+KECT S DP  A+EL   I    +              VSCG  E+ R++FD
Sbjct: 90  IDIYTSLVKECTLSTDPETAIELHTQIITRGIELPLTLLNRILIMFVSCGLLENARRVFD 149

Query: 254 KMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGILVCVLKACV 75
            M VR+  SWA +     EN EYE A+ +F+ M  +   L   G      I  C+LKAC 
Sbjct: 150 VMSVRDFHSWATLFVSYYENGEYENAIDVFVSMLCQ---LDVMGFSFPPWIWSCLLKACA 206

Query: 74  ETMNLDLGKQIHGCLLKLGSCE 9
            TMN+ LG Q+HGCLLKLG+C+
Sbjct: 207 CTMNVPLGMQVHGCLLKLGACD 228


>ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Capsella rubella]
           gi|482572368|gb|EOA36555.1| hypothetical protein
           CARUB_v10011695mg [Capsella rubella]
          Length = 411

 Score =  130 bits (327), Expect = 3e-28
 Identities = 81/196 (41%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
 Frame = -2

Query: 581 TPLQFQLPLNRPHHKLHQPI----KPEIKKT--TNPSCTISDILRLMDNLGLNIPVDIYV 420
           T    QL L +P H+  +P+    +P+I+ T  ++P C+ISDILRLMD L L    D+Y 
Sbjct: 34  TSFDVQLLLRKPKHQKSEPVVVIQQPQIQTTQKSSPRCSISDILRLMDTLSLPGNEDLYS 93

Query: 419 SLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRVR 240
            L KE     D   A EL  HI KS++ PS           VSCG  +  R +FDKM  R
Sbjct: 94  CLAKESARENDRRGAYELQVHIMKSSIRPSTTFVNRLLLMHVSCGRLDITRNMFDKMPHR 153

Query: 239 NSKSWAAIIAGCVENSEYEGALRLFMEM--QSETGNLCKCGDIIDDGILVCVLKACVETM 66
           +  SWA +  GC+E  +YE A  LF+ M   S+ G   K    I   I+ CVLKAC    
Sbjct: 154 DFHSWAIVFLGCIEMGDYEDAALLFVAMLKHSKNGGAFK----IPSWIMGCVLKACAMIR 209

Query: 65  NLDLGKQIHGCLLKLG 18
           +L LGKQ+HG   KLG
Sbjct: 210 DLALGKQVHGLCQKLG 225


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  127 bits (320), Expect = 2e-27
 Identities = 76/175 (43%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
 Frame = -2

Query: 521 KPEIKKTTNPSCTISDILRLMDNLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSN 342
           K      T  + T +DILRLMD LGL IP DIY SLIKE + + D ++A +L  HI +S 
Sbjct: 48  KKSNSNATPTTSTPTDILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRSG 107

Query: 341 VIPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRV--RNSKSWAAIIAGCVENSEYEGALRL 168
           +  S           VSCG     R +FDKM V  +NS SWA ++A  ++N  YE A+ L
Sbjct: 108 LPLSSALLNRILLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFL 167

Query: 167 FMEMQSETGNLCKCGDIIDDGILVCVLKACVETMNLDLGKQIHGCLLKLGSCESL 3
           F++M      +      +   I +CVLKACV TMNL LGKQ+HG LLK+G   +L
Sbjct: 168 FVQMMELHSTIML---ELPAWIFICVLKACVHTMNLTLGKQVHGWLLKVGYATNL 219


>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  126 bits (317), Expect = 5e-27
 Identities = 70/167 (41%), Positives = 89/167 (53%)
 Frame = -2

Query: 509 KKTTNPSCTISDILRLMDNLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSNVIPS 330
           KK      T S IL LMD L   IP+DIY SLIKECT S DP  A+EL  HI  S + P 
Sbjct: 5   KKRKRKGATTSHILHLMDVLPFPIPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGIKPP 64

Query: 329 XXXXXXXXXXLVSCGCFEHVRQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQS 150
                      VSCG  ++  QLFD M V++  SWA +     +N++YE A+ +F+ M  
Sbjct: 65  LSFINRILVMFVSCGLLDYACQLFDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAMLH 124

Query: 149 ETGNLCKCGDIIDDGILVCVLKACVETMNLDLGKQIHGCLLKLGSCE 9
           + G            I  C LKAC    N+ LG Q+HG LLKLG+C+
Sbjct: 125 QLGM-----SEFPPWICACFLKACACIENIPLGMQVHGWLLKLGTCD 166


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score =  124 bits (310), Expect = 3e-26
 Identities = 86/229 (37%), Positives = 117/229 (51%), Gaps = 37/229 (16%)
 Frame = -2

Query: 599 IHSISNTPLQFQLPLNRP--HH-----------------------------KLHQPIKPE 513
           I ++S+  +QF+LP+ +P  HH                             K  +  K E
Sbjct: 150 ISNVSSHCIQFRLPMPKPQAHHPGTITIIQPPKINSTAFNDDDDCKGSNKKKKKKEKKKE 209

Query: 512 IKKT----TNPSCTISDILRLMDNLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICKS 345
            KK+    T  + T +DILRLMD LGL IP DIY SLIKE + + D ++A +L  HI +S
Sbjct: 210 KKKSNSNATPTTSTPTDILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRS 269

Query: 344 NVIPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRV--RNSKSWAAIIAGCVENSEYEGALR 171
            +  S           VSCG     R +FDKM V  +NS SWA ++A  ++N  YE A+ 
Sbjct: 270 GLPLSSALLNRILLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIF 329

Query: 170 LFMEMQSETGNLCKCGDIIDDGILVCVLKACVETMNLDLGKQIHGCLLK 24
           LF++M      +      +   I +CVLKACV TMNL LGKQ+HG L K
Sbjct: 330 LFVQMMELHSTIML---ELPAWIFICVLKACVHTMNLTLGKQVHGWLTK 375


>ref|NP_174459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169166|sp|Q9C6R9.1|PPR66_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g31790 gi|12321298|gb|AAG50719.1|AC079041_12
           hypothetical protein [Arabidopsis thaliana]
           gi|111074348|gb|ABH04547.1| At1g31790 [Arabidopsis
           thaliana] gi|332193272|gb|AEE31393.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 409

 Score =  121 bits (304), Expect = 1e-25
 Identities = 81/204 (39%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
 Frame = -2

Query: 602 TIHSISN---TPLQFQLPLNRPHHKLHQPI----KPEIKKTTNPS--CTISDILRLMDNL 450
           T  S+ N   T    QL L +P H+  +P+    +P+I+   NPS  C+ SDILRLMD+L
Sbjct: 24  TARSVGNDVRTNFDVQLFLRKPKHQKSEPVVVIQQPQIQPQ-NPSSRCSTSDILRLMDSL 82

Query: 449 GLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFEHV 270
            L    DIY  L KE     D   A EL  HI KS++ P+           VSCG  +  
Sbjct: 83  SLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDIT 142

Query: 269 RQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGILVCV 90
           RQ+FD+M  R+  SWA +  GC+E  +YE A  LF+ M   +    K    I   IL CV
Sbjct: 143 RQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQ---KGAFKIPSWILGCV 199

Query: 89  LKACVETMNLDLGKQIHGCLLKLG 18
           LKAC    + +LGKQ+H    KLG
Sbjct: 200 LKACAMIRDFELGKQVHALCHKLG 223


>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  119 bits (299), Expect = 6e-25
 Identities = 73/191 (38%), Positives = 111/191 (58%), Gaps = 11/191 (5%)
 Frame = -2

Query: 557 LNRPHHKLHQPIK-PEIKKTTN----PSCTISDILRLMDNLGLNIPVDIYVSLIKECTES 393
           +  P+H    P++ P IK   +     SC+ SDI+RLMD+L   IP DIY SLIKECT +
Sbjct: 27  ITAPNHTKLPPLRTPNIKPINHLPAKKSCSSSDIMRLMDSLCHPIPPDIYTSLIKECTLT 86

Query: 392 RDPSKAVELCNH-ICKSNVIPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRVRNS-KSWAA 219
            D ++A+ L +H I ++N+  +           VSCG  +  R LFDKM ++    SW  
Sbjct: 87  SDSTEALCLHSHLISQTNLKLTPPLVHRLLLMHVSCGQLDIARNLFDKMPLKKDFISWVI 146

Query: 218 IIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIID----DGILVCVLKACVETMNLDLG 51
           +I GC  NS+YE  + LF++M  +  +    G + D    + I++C++K C+ +MN+ LG
Sbjct: 147 VIVGCFSNSKYEAGINLFIDMLLQ--HSVYDGLMFDLNTWNIIILCIIKCCIYSMNISLG 204

Query: 50  KQIHGCLLKLG 18
           KQ+HG L K+G
Sbjct: 205 KQVHGILFKVG 215


>gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis]
          Length = 453

 Score =  117 bits (294), Expect = 2e-24
 Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
 Frame = -2

Query: 494 PSCTISDILRLMDNLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSNVIP-SXXXX 318
           P+C+ SD+LRLMD L L I  D+Y+S +KECT S D   A +L NHI ++++   +    
Sbjct: 102 PACSTSDVLRLMDALCLPISPDMYISFMKECTISADFCGAEDLHNHISRNSLQHLALPLL 161

Query: 317 XXXXXXLVSCGCFEHVRQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGN 138
                  VSCG  +    LF +M  ++ KSWA +I   V NS+YE A  LF++M      
Sbjct: 162 NRLLFMNVSCGRLDLACDLFYRMPFKDFKSWATMIVANVNNSDYEEATSLFLKMLHHINM 221

Query: 137 LCKCGDIIDDGILVCVLKACVETMNLDLGKQIHGCLLKLGSCESL 3
           L          I+VC+LK CV T N++LGKQ+H C LKLG   SL
Sbjct: 222 L-----EFPSWIIVCLLKTCVCTRNMELGKQVHACALKLGHANSL 261


>ref|XP_002893686.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339528|gb|EFH69945.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 410

 Score =  116 bits (290), Expect = 6e-24
 Identities = 74/194 (38%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
 Frame = -2

Query: 581 TPLQFQLPLNRPHHKLHQPI----KPEIK-KTTNPSCTISDILRLMDNLGLNIPVDIYVS 417
           T    QL L +P H+  +P+    +P+I+ +  +P C+ SDILRLMD+L L    D+Y  
Sbjct: 34  TNFDVQLFLRKPKHQKSEPVVVIQQPQIQPQKPSPRCSTSDILRLMDSLSLPGNEDLYSC 93

Query: 416 LIKECTESRDPSKAVELCNHICKSNVI-PSXXXXXXXXXXLVSCGCFEHVRQLFDKMRVR 240
           L KE     D   A EL  HI KS++  P+           VSCG  +  R +FDKM  R
Sbjct: 94  LAKESARENDRRGAYELQVHIMKSSIRRPTTTFVNRLLLMHVSCGRLDITRHMFDKMPHR 153

Query: 239 NSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGILVCVLKACVETMNL 60
           +  SWA +  GC+E  +YE A  LF+ M   + N       I   I+ CVLKAC    + 
Sbjct: 154 DFHSWAIVFLGCIEMGDYEDAALLFVSMLKHSQN---GAFKIPSWIMGCVLKACAMIRDF 210

Query: 59  DLGKQIHGCLLKLG 18
           +LGKQ+H    KLG
Sbjct: 211 ELGKQVHALCHKLG 224


>ref|XP_004292904.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Fragaria vesca subsp. vesca]
          Length = 421

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
 Frame = -2

Query: 611 LPITIHSISNTPLQFQLPLNRPHHKLHQPIKPEIKKTTNPSCTISDILRLMDNLGLNIPV 432
           LP+   S SN      L  N    K +   K   K      C+ SDILRLMD  GL +PV
Sbjct: 40  LPLPRSSKSNP-----LTSNNTTRKKNNTRKKRKKNENGSRCSTSDILRLMD--GLQVPV 92

Query: 431 D--------IYVSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFE 276
                    +Y SLI +C++S     A+ L  H+ + +  P            V  G  +
Sbjct: 93  TSTTLSDNHMYASLINDCSDS---GAALHLQAHLTRKSPPPPLHLLNRLLLRHVCNGRLD 149

Query: 275 HVRQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDD---G 105
           +  QLFD+M +++  SWA +I    +N++Y  ALRLF+ M     +L  C   I +    
Sbjct: 150 NAHQLFDEMPLKDFNSWATLIVAYAQNADYAEALRLFLSML----HLQDCHVDISEFPAW 205

Query: 104 ILVCVLKACVETMNLDLGKQIHGCLLKLG 18
           I+ CVL A   TM++ LG+Q+HGC LKLG
Sbjct: 206 IMACVLDA---TMDVGLGEQLHGCCLKLG 231


>ref|XP_002461747.1| hypothetical protein SORBIDRAFT_02g007340 [Sorghum bicolor]
           gi|241925124|gb|EER98268.1| hypothetical protein
           SORBIDRAFT_02g007340 [Sorghum bicolor]
          Length = 442

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
 Frame = -2

Query: 521 KPEIKKTTNPSCT--ISDILRLMDNLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICK 348
           KP  + T +  C+    D+LRLMD LG+    DIY+SL++EC ++ + +         C 
Sbjct: 84  KPPPEATDSHPCSSGAGDVLRLMDALGIPPDEDIYISLLRECADAAEVASVHAHMTACCA 143

Query: 347 SNVIPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRL 168
           S+ +PS            +CG  E  R++FD M  RN  +WA +++   +   +  A+RL
Sbjct: 144 SDALPS-PVANRVLLSYAACGDIEAARRVFDGMPDRNGMAWATMVSAYSDGCFHHEAMRL 202

Query: 167 FMEMQSETGNLCKCGDIIDDGILVCVLKACVETMNLDLGKQIHGCLLKLG 18
           F  M   T  L   GD     IL  VL++C+    L LG+Q+H  ++K G
Sbjct: 203 FAHMCHRT--LVLDGDCCSHAIL-AVLRSCIRAGELRLGEQVHALVIKKG 249


>ref|NP_001131386.1| hypothetical protein [Zea mays] gi|194691388|gb|ACF79778.1| unknown
           [Zea mays] gi|414884126|tpg|DAA60140.1| TPA:
           hypothetical protein ZEAMMB73_895402 [Zea mays]
          Length = 438

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 53/167 (31%), Positives = 81/167 (48%)
 Frame = -2

Query: 518 PEIKKTTNPSCTISDILRLMDNLGLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSNV 339
           PE   +  PS    D+LRLMD LG+    DIY+SL++EC ++ + +           S+ 
Sbjct: 83  PEATDSHPPSSGAGDVLRLMDALGIPPDEDIYISLLRECADAAEVASVHAHITARRASDG 142

Query: 338 IPSXXXXXXXXXXLVSCGCFEHVRQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFME 159
           +PS            +CG  E  R++FD M   N  +WA +++   +   +  A+RLF  
Sbjct: 143 LPS-PVANRLLLSYAACGDIEAARRVFDGMPTTNGMAWATMVSAYSDGCLHHEAMRLFAH 201

Query: 158 MQSETGNLCKCGDIIDDGILVCVLKACVETMNLDLGKQIHGCLLKLG 18
           M   T  L   GD     I V VL++C     L LG+Q+H  ++K G
Sbjct: 202 MCHGTPVL--DGDCYSHAI-VAVLRSCTRAGELRLGEQVHALVVKKG 245


>ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 48/145 (33%), Positives = 70/145 (48%)
 Frame = -2

Query: 449 GLNIPVDIYVSLIKECTESRDPSKAVELCNHICKSNVIPSXXXXXXXXXXLVSCGCFEHV 270
           G ++   +YV L+  C E+     A  L  H+ K+  I             + CG  +  
Sbjct: 73  GQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDA 132

Query: 269 RQLFDKMRVRNSKSWAAIIAGCVENSEYEGALRLFMEMQSETGNLCKCGDIIDDGILVCV 90
           R LFD+M  +N  +W A+I G   NS+   AL +F+EM        K G    D  L  +
Sbjct: 133 RNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEM-------LKLGRYPSDYTLGGM 185

Query: 89  LKACVETMNLDLGKQIHGCLLKLGS 15
           L ACV + N+DLGKQ+HG  +K G+
Sbjct: 186 LSACVASHNIDLGKQVHGYTIKYGA 210