BLASTX nr result

ID: Atropa21_contig00040402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040402
         (551 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]            56   7e-06

>emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]
          Length = 1448

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
 Frame = +1

Query: 322 HHGSR------VDFPYFDGISGADPY*WLRKCERYFHYNNITDLEQKLEMGILHLNGKTE 483
           HH  R      +DFP +DG S  DP  ++ +CE YFH   I + E+K+ M   +L    +
Sbjct: 53  HHNDRPPKFQKLDFPRYDGKS--DPLIFINRCESYFHQQRIME-EEKVWMASYNLEDGAQ 109

Query: 484 AWYFSFHLCRGNISWKEFKE 543
            WY   H   G  SW+ FK+
Sbjct: 110 LWYIQVHTDEGTPSWRRFKD 129


Top