BLASTX nr result
ID: Atropa21_contig00040342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040342
(498 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 122 6e-26
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 121 8e-26
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 109 4e-22
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 108 7e-22
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 107 2e-21
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 107 2e-21
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 107 2e-21
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 106 4e-21
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 106 4e-21
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 104 1e-20
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 104 1e-20
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 103 2e-20
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 103 2e-20
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 103 2e-20
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 103 3e-20
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 103 3e-20
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 101 9e-20
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 101 9e-20
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 101 1e-19
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta... 101 1e-19
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 122 bits (305), Expect = 6e-26
Identities = 52/105 (49%), Positives = 75/105 (71%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
F FFK++WNI+G+ +AV EFF +G++LKQ+NH II L+P V FRPISCC
Sbjct: 832 FNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQVNHFRPISCC 891
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQE 16
N+ YK+++KI+A+RI P L+++I Q+ FI+ R M++NI L QE
Sbjct: 892 NLLYKIVSKILANRIAPVLETIIGETQTAFIKNRKMMDNIFLVQE 936
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 121 bits (304), Expect = 8e-26
Identities = 52/105 (49%), Positives = 75/105 (71%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
F FFK++WNI+G+ AV EFF +G++LKQ+NH IIAL+P V FRPISCC
Sbjct: 284 FNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQVNHFRPISCC 343
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQE 16
N+ YK+++KI+A+RI P L+++I Q+ FI+ + M++NI L QE
Sbjct: 344 NLLYKIVSKILANRIAPVLETIIGETQTAFIKNKKMMDNIFLIQE 388
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 109 bits (272), Expect = 4e-22
Identities = 52/122 (42%), Positives = 79/122 (64%)
Frame = -1
Query: 381 RNKLYSLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVP 202
+++ ++L N +T+ FFK++W+I+G +AV+EFFRSGRLL Q N T + +VP
Sbjct: 452 KSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVP 511
Query: 201 NSSHCPTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLA 22
+ + +FRPISCCN YKVI+K++A R+ L I +QS F++GR + EN+ LA
Sbjct: 512 KKPNADRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLA 571
Query: 21 QE 16
E
Sbjct: 572 TE 573
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 108 bits (270), Expect = 7e-22
Identities = 54/127 (42%), Positives = 80/127 (62%)
Frame = -1
Query: 381 RNKLYSLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVP 202
R L+S+ + +T+ F+KR+W+I+G +F AVK FF G L K +N TI+AL+P
Sbjct: 874 RGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIP 933
Query: 201 NSSHCPTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLA 22
+ D+RPISCCN+ YKVI+KIIA+R+ L + I QS F++ R +IEN+ LA
Sbjct: 934 KKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLA 993
Query: 21 QEKTSNH 1
E ++
Sbjct: 994 TELVKDY 1000
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 107 bits (267), Expect = 2e-21
Identities = 52/124 (41%), Positives = 78/124 (62%)
Frame = -1
Query: 372 LYSLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSS 193
L+++ N +T+ FFK +W+I G+ F +A+K FF G L K +N TI+AL+P
Sbjct: 35 LFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKD 94
Query: 192 HCPTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQEK 13
+ D+RPISCCN+ YKVI+KIIA+R+ L + I + QS F+ R +IEN+ LA E
Sbjct: 95 EATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATEL 154
Query: 12 TSNH 1
++
Sbjct: 155 VKDY 158
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 107 bits (266), Expect = 2e-21
Identities = 51/117 (43%), Positives = 78/117 (66%)
Frame = -1
Query: 366 SLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHC 187
SL +N ++ FF+ +W+I+G + +A+ EFF SG+LLKQ N T + L+P +S+
Sbjct: 318 SLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNA 377
Query: 186 PTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQE 16
T+ +FRPISC N YKVI+K++ SR+ L ++I +QS F+ GRS+ EN+ LA E
Sbjct: 378 CTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATE 434
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 107 bits (266), Expect = 2e-21
Identities = 51/117 (43%), Positives = 78/117 (66%)
Frame = -1
Query: 366 SLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHC 187
SL +N ++ FF+ +W+I+G + +A+ EFF SG+LLKQ N T + L+P +S+
Sbjct: 318 SLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNA 377
Query: 186 PTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQE 16
T+ +FRPISC N YKVI+K++ SR+ L ++I +QS F+ GRS+ EN+ LA E
Sbjct: 378 CTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATE 434
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 106 bits (264), Expect = 4e-21
Identities = 51/110 (46%), Positives = 73/110 (66%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
+T+ FFK +W I+G++F AV+ FF G L K IN TI+AL+P + + D+RPISCC
Sbjct: 476 YTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCC 535
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQEKTSNH 1
N+ YKVI+KIIA+R+ L I QS F++ R +IEN+ LA E ++
Sbjct: 536 NVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDY 585
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 106 bits (264), Expect = 4e-21
Identities = 51/105 (48%), Positives = 70/105 (66%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
+TA F+K +WNI+G +F A++ FF G L K IN TI+AL+P + D+RPISCC
Sbjct: 364 YTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCC 423
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQE 16
N+ YKVI+KIIA+R+ L I QS F++ R +IEN+ LA E
Sbjct: 424 NVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATE 468
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 104 bits (260), Expect = 1e-20
Identities = 56/122 (45%), Positives = 73/122 (59%)
Frame = -1
Query: 381 RNKLYSLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVP 202
R L+SL +N FTA FF SW+I+G + A+KEFF SG LLKQ N T I L+P
Sbjct: 453 RAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIP 512
Query: 201 NSSHCPTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLA 22
+ DFRPISC N YKVI +++ R+ L +I AQS F+ GRS+ EN+ LA
Sbjct: 513 KIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLA 572
Query: 21 QE 16
+
Sbjct: 573 TD 574
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 104 bits (260), Expect = 1e-20
Identities = 49/110 (44%), Positives = 72/110 (65%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
FT+ FFK SW I+G +F A++ FF G L K +N TI+AL+P + D+RPISCC
Sbjct: 29 FTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPISCC 88
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQEKTSNH 1
N+ YKVI+KI+A+R+ L I QS+F++ R +IEN+ LA + ++
Sbjct: 89 NVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDY 138
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 103 bits (258), Expect = 2e-20
Identities = 51/106 (48%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQF-CSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISC 154
F FF+++W ++G+ +AVKEFF G LL ++N TII LVP ++ T+ DFRPISC
Sbjct: 296 FNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIITLVPKVANPTTMSDFRPISC 355
Query: 153 CNITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQE 16
CN YK+I K++A+R+ L ++ +QSTFI GR + +NI LAQE
Sbjct: 356 CNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQE 401
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 103 bits (257), Expect = 2e-20
Identities = 51/122 (41%), Positives = 74/122 (60%)
Frame = -1
Query: 381 RNKLYSLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVP 202
+N +SL +N F+ FF W I+G + A+ EFF SG+LLKQ N T + L+P
Sbjct: 350 KNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIP 409
Query: 201 NSSHCPTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLA 22
++ ++ DFRPISC N YKVI+K++ R+ FL + I +QS F+ GR +EN+ LA
Sbjct: 410 KITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLA 469
Query: 21 QE 16
E
Sbjct: 470 TE 471
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 103 bits (257), Expect = 2e-20
Identities = 50/108 (46%), Positives = 69/108 (63%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
FT+ FFK +W I+G +F A++ FF G L K IN TI+AL+P + D+RPISCC
Sbjct: 884 FTSEFFKATWEILGNEFILAIQSFFAKGFLPKGINTTILALIPKKKEAKEMKDYRPISCC 943
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQEKTS 7
N+ YKVI+KIIA+R+ I QS F++ R +IEN+ LA + S
Sbjct: 944 NVIYKVISKIIANRLKLVPPKFIAGNQSAFVKDRLLIENVLLATDTAS 991
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 103 bits (256), Expect = 3e-20
Identities = 53/131 (40%), Positives = 80/131 (61%)
Frame = -1
Query: 408 KRMRRELIKRNKLYSLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQI 229
+R +L + +SL +N +++ FFK W ++G + AV+EFFRSG+LLKQ
Sbjct: 445 ERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQW 504
Query: 228 NHTIIALVPNSSHCPTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGR 49
N T + L+P ++ + DFRPISC N YKVI K++ SR+ L+ +I +QS F+ GR
Sbjct: 505 NATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGR 564
Query: 48 SMIENIHLAQE 16
+ EN+ LA E
Sbjct: 565 LLSENVLLATE 575
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 103 bits (256), Expect = 3e-20
Identities = 53/131 (40%), Positives = 80/131 (61%)
Frame = -1
Query: 408 KRMRRELIKRNKLYSLCQNSLQTVLEFTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQI 229
+R +L + +SL +N +++ FFK W ++G + AV+EFFRSG+LLKQ
Sbjct: 445 ERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQW 504
Query: 228 NHTIIALVPNSSHCPTVGDFRPISCCNITYKVITKIIASRINPFLDSLIDRAQSTFIEGR 49
N T + L+P ++ + DFRPISC N YKVI K++ SR+ L+ +I +QS F+ GR
Sbjct: 505 NATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGR 564
Query: 48 SMIENIHLAQE 16
+ EN+ LA E
Sbjct: 565 LLSENVLLATE 575
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 101 bits (252), Expect = 9e-20
Identities = 46/110 (41%), Positives = 70/110 (63%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
+T+ F+K SW I+G++ A++ FF G L K +N TI+AL+P + D+RPISCC
Sbjct: 197 YTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCC 256
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQEKTSNH 1
N+ YK I+KI+A+R+ L I QS F++ R +IEN+ LA E ++
Sbjct: 257 NVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDY 306
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 101 bits (252), Expect = 9e-20
Identities = 47/110 (42%), Positives = 73/110 (66%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
+T+ FFK +W++ G F +A++ FF G L K +N TI+AL+P + D+RPISCC
Sbjct: 773 YTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCC 832
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQEKTSNH 1
N+ YKVI+KI+A+R+ L S I + QS F++ R ++EN+ LA E ++
Sbjct: 833 NVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDY 882
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 101 bits (251), Expect = 1e-19
Identities = 48/110 (43%), Positives = 72/110 (65%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
+T+ F+K +W+I+G++F V+ FF+ G L K IN I+AL+P + D+RPISCC
Sbjct: 123 YTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCC 182
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQEKTSNH 1
N+ YKVI+KIIA+R+ L I QS F++ R +IEN+ LA E ++
Sbjct: 183 NVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDY 232
>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 977
Score = 101 bits (251), Expect = 1e-19
Identities = 48/108 (44%), Positives = 70/108 (64%)
Frame = -1
Query: 330 FTAAFFKRSWNIMGEQFCSAVKEFFRSGRLLKQINHTIIALVPNSSHCPTVGDFRPISCC 151
+ F+K +W+I+GE+F A+K FF G L K +N TI+AL+P + D+RPISCC
Sbjct: 591 YRTEFYKATWDIIGEEFVLAIKSFFEKGFLPKGVNSTILALIPKKLEEIEMKDYRPISCC 650
Query: 150 NITYKVITKIIASRINPFLDSLIDRAQSTFIEGRSMIENIHLAQEKTS 7
N+ YKVI+KIIA+R+ L + I QS F++ R ++EN+ L E S
Sbjct: 651 NVIYKVISKIIANRLKRLLPNFIAGNQSAFVQDRLLLENLLLTTELKS 698