BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040337
         (518 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777...    51   2e-07
emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group]         50   4e-07
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...    60   4e-07
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]               47   8e-06
ref|XP_002438095.1| hypothetical protein SORBIDRAFT_10g007953 [S...    55   1e-05

>ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777276 [Setaria italica]
          Length = 1188

 Score = 50.8 bits (120), Expect(2) = 2e-07
 Identities = 20/38 (52%), Positives = 27/38 (71%)
 Frame = -3

Query: 117 KLAMTDPNWNTTMRDEFEALKS*HTWDLVPRLEGVNVI 4
           + A+ DPNW   M+ EF+ALK+  TW LVPR  GVN++
Sbjct: 652 RFALVDPNWRAAMQSEFDALKANDTWSLVPRPPGVNIV 689



 Score = 29.6 bits (65), Expect(2) = 2e-07
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 212 HHMETHA*HGIFKPKVYFNLSAQAISPLPKN 120
           H M T    G  +P    NLSA A+SPLP++
Sbjct: 620 HSMRTRGKSGFVQPVDRLNLSAAALSPLPQS 650


>emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group]
          Length = 322

 Score = 50.1 bits (118), Expect(2) = 4e-07
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -3

Query: 111 AMTDPNWNTTMRDEFEALKS*HTWDLVPRLEGVNVI 4
           A+ DPNW + M +EF AL++  TWDLVPR  G NV+
Sbjct: 33  ALADPNWRSAMEEEFTALQANRTWDLVPRPNGANVV 68



 Score = 29.6 bits (65), Expect(2) = 4e-07
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 206 METHA*HGIFKPKVYFNLSAQAISPLPK 123
           M T   HG+ +P   +NLSA  +SP+P+
Sbjct: 1   MTTRGKHGLHQPVKRYNLSATTLSPVPR 28


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
 Frame = -3

Query: 393  HHPPGEPSPATAR*PALPRHLPAITPLLPHCLTAPQRPYPTA*K**LSARHP-----IVR 229
            H P   PSP +A  PA  R     TP  P    A     P + +  +  R P     +V 
Sbjct: 993  HSPRPAPSPGSASSPATARSTTTATPSPPAPWFAAVPTRPRSVRGQIGPRPPSTTALLVI 1052

Query: 228  KHHPDTPHGNTCLTRDLQTKSLLQFVSSSHFTIT*KPKLAMTDPNWNTTMRDEFEALKS* 49
              H  T  G   + + +Q    L   +S+   +    + A+ DP W T M +EF AL + 
Sbjct: 1053 NDHTMTTRGKAGVRKPVQR---LNLHASTLSPVPRTYRAALADPYWRTAMEEEFTALTAN 1109

Query: 48   HTWDLVPRLEGVNVI 4
             TWDLVPR  G NV+
Sbjct: 1110 RTWDLVPRPSGANVV 1124


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score = 47.4 bits (111), Expect(2) = 8e-06
 Identities = 19/38 (50%), Positives = 27/38 (71%)
 Frame = -3

Query: 117 KLAMTDPNWNTTMRDEFEALKS*HTWDLVPRLEGVNVI 4
           K A+ DPNWN +M +E++AL   +TW LVP+  G N+I
Sbjct: 646 KQALMDPNWNPSMTEEYDALIKTYTWSLVPKPAGTNII 683



 Score = 27.7 bits (60), Expect(2) = 8e-06
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 206 METHA*HGIFKPKVYFNLSAQAISPLPK 123
           M T +  GI KPK   +L+AQ +S +PK
Sbjct: 616 MVTRSQQGIRKPKKILSLNAQTLSQIPK 643


>ref|XP_002438095.1| hypothetical protein SORBIDRAFT_10g007953 [Sorghum bicolor]
            gi|241916318|gb|EER89462.1| hypothetical protein
            SORBIDRAFT_10g007953 [Sorghum bicolor]
          Length = 1330

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 18/187 (9%)
 Frame = -3

Query: 510  PISVVLSRNPHCGKLSASCLP----------WRHSCRKPDSPPHYPVTLHHPPGEPSPAT 361
            P+ V   R P  G   ++  P          ++   R    PP  PV    P     P T
Sbjct: 699  PVRVYQRRAPGVGSAPSTPAPPARYAQPVRVYQRRARLAPLPPAAPVAPSSPGSPAPPVT 758

Query: 360  AR*PALPRHLP------AITPLLPHCLTAPQRPYPTA*K**LSARHPIVRKHHPDT--PH 205
            +  PA P   P      A+TP+  H     + P            HP+V +H   T  P 
Sbjct: 759  SSPPATPTPPPRHPATRAVTPVY-HPPLLHRHPRHV---------HPMVTRHAAGTLQPR 808

Query: 204  GNTCLTRDLQTKSLLQFVSSSHFTIT*KPKLAMTDPNWNTTMRDEFEALKS*HTWDLVPR 25
                +  D Q       VS  H ++    + A+ DP+W   M +E+ AL +  TWDLVPR
Sbjct: 809  ALAAMPGDSQ-------VSPVHSSV----REALLDPHWRRAMEEEYAALLANQTWDLVPR 857

Query: 24   LEGVNVI 4
              G N++
Sbjct: 858  PPGSNIV 864