BLASTX nr result

ID: Atropa21_contig00040321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040321
         (601 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344137.1| PREDICTED: LOB domain-containing protein 41-...   145   8e-33
ref|XP_004238927.1| PREDICTED: LOB domain-containing protein 41-...   141   2e-31

>ref|XP_006344137.1| PREDICTED: LOB domain-containing protein 41-like [Solanum
           tuberosum]
          Length = 253

 Score =  145 bits (366), Expect = 8e-33
 Identities = 89/151 (58%), Positives = 106/151 (70%), Gaps = 14/151 (9%)
 Frame = -2

Query: 600 IIQVPLNNDYDSSIDHDQEAHQIIEPLKGCDIRHISRNSSSSGQHHVKTRNGWFKRKTTN 421
           I+QVP+NND D + +++ +    I PLKGCDIRH+S+N+S + Q  +KTRNG  KRK T 
Sbjct: 109 IMQVPINNDDDDNNNNNTDQ---IVPLKGCDIRHVSKNNSDN-QQVIKTRNGRLKRKGT- 163

Query: 420 VDVLADASG--------YLMNDPPSKFSITGWDHVDEL-----KRAPSHDSFSVETVEPT 280
            D +A AS          L N PP KFSITGWD  +E+     KRA SHDSFSVETVEPT
Sbjct: 164 FDSVASASAEAEAAEEYLLKNQPPLKFSITGWDQFEEIDDELIKRAASHDSFSVETVEPT 223

Query: 279 LLMNRVEPGLPVKLEEDGD-VGLELTLGLMS 190
           LL+NRV+   PVKLEEDGD VGLELTLGLMS
Sbjct: 224 LLVNRVD---PVKLEEDGDHVGLELTLGLMS 251


>ref|XP_004238927.1| PREDICTED: LOB domain-containing protein 41-like [Solanum
           lycopersicum]
          Length = 254

 Score =  141 bits (355), Expect = 2e-31
 Identities = 87/152 (57%), Positives = 105/152 (69%), Gaps = 15/152 (9%)
 Frame = -2

Query: 600 IIQVPLNNDYDSSIDHDQEAHQIIEPLKGCDIRHISR-NSSSSGQHHVKTRNGWFKRKTT 424
           I+QVP+N+D     D +    QI+ PLKGCDIRH+S+ NS++S    VKTRNG  KRK +
Sbjct: 109 IMQVPINSD-----DDNNSTDQIV-PLKGCDIRHVSKYNSTNSDNQQVKTRNGRLKRKGS 162

Query: 423 NVDVLADAS-------GYLM-NDPPSKFSITGWDHVDE-----LKRAPSHDSFSVETVEP 283
             D  A AS        YL+ N PP KFSITGWD  +E     +KR+ SHDSFSVETVEP
Sbjct: 163 TFDSAASASVEVEAAEEYLLKNQPPLKFSITGWDQFEEREDEMIKRSQSHDSFSVETVEP 222

Query: 282 TLLMNRVEPGLPVKLEEDGD-VGLELTLGLMS 190
           TLL+NRV+   PVKLEEDGD +GL+LTLGLMS
Sbjct: 223 TLLVNRVD---PVKLEEDGDLLGLDLTLGLMS 251


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