BLASTX nr result

ID: Atropa21_contig00040314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040314
         (1042 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...   108   3e-21
gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          86   2e-14
ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily membe...    62   5e-07

>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score =  108 bits (270), Expect = 3e-21
 Identities = 63/136 (46%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
 Frame = -2

Query: 432 VIGKFSYG*PELKELRTLIHVQCGTKGECKIGFFRARRVLI*LTLIKDFVNLSSKGAYYI 253
           +IGKFSYG P++ +LR LI  QC  KGE  IG    R VLI  +L++D+V L SK  +YI
Sbjct: 44  MIGKFSYGWPDILDLRKLIPKQCELKGEVDIGLLCNRYVLIRASLLEDYVKLLSKPQFYI 103

Query: 252 NVKDGISYQMRPLIYDSRFKIEEETSNAMACILFSNLLPTYFVKESLFSLVSVVGKPLHL 73
              +  SY MR L +D  F  EEET+ A+A I F +L P +F KE++FS+ + VG+PL +
Sbjct: 104 -THNHWSYPMRTLKWDPLFDPEEETTTAIAWISFPSLPPNFFGKETIFSMAAAVGRPLQV 162

Query: 72  DMVT------SCARVK 43
           D+ T      SCAR +
Sbjct: 163 DLATQNKTKPSCARTE 178


>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 50/121 (41%), Positives = 72/121 (59%)
 Frame = -2

Query: 504 GVPVTKWIEAELARMEEIENLKYAVIGKFSYG*PELKELRTLIHVQCGTKGECKIGFFRA 325
           G     W + E  ++   +NL+YAV+ KFSYG P+L ELR  I +Q   KG C IGF   
Sbjct: 4   GKTTITWTKKEFEKLTVRQNLQYAVVAKFSYGRPDLYELRKAIPIQLEIKGPCNIGFLEE 63

Query: 324 RRVLI*LTLIKDFVNLSSKGAYYINVKDGISYQMRPLIYDSRFKIEEETSNAMACILFSN 145
           R +LI L+L++D+  L SK A+ + V++   + +R L +D  F  EEET+ A+A I F  
Sbjct: 64  RHILIRLSLLEDYATLMSK-AWELRVRNRY-FPLRFLKWDPWFNPEEETTIAIAWISFPG 121

Query: 144 L 142
           L
Sbjct: 122 L 122


>ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily member 4-like [Solanum
           tuberosum]
          Length = 1068

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
 Frame = -2

Query: 198 FKIEEETSNAMACILFSNLLPTYFVKESLFSLVSVVGKPLHLDMVT------SCARVKVL 37
           F  EE+T+ A+A I F  L P +F +E +FSL   VGKPL +DM T      SCAR+KV 
Sbjct: 2   FNPEEKTTTAIAWISFPALPPNFFGREVVFSLAVAVGKPLQVDMATRNQTRPSCARMKVE 61

Query: 36  VDLLSDF-RRLKM 1
           VDLL +F +R+K+
Sbjct: 62  VDLLGEFPKRIKI 74


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