BLASTX nr result
ID: Atropa21_contig00040304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040304
(837 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 72 2e-10
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 72 2e-10
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 70 1e-09
gb|EOX94220.1| Uncharacterized protein TCM_003746 [Theobroma cacao] 57 1e-09
emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera] 65 2e-08
emb|CAN71472.1| hypothetical protein VITISV_040055 [Vitis vinifera] 65 4e-08
emb|CAN74305.1| hypothetical protein VITISV_035483 [Vitis vinifera] 64 5e-08
emb|CAN71056.1| hypothetical protein VITISV_016917 [Vitis vinifera] 64 5e-08
emb|CAN68261.1| hypothetical protein VITISV_004267 [Vitis vinifera] 64 5e-08
emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera] 64 7e-08
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera] 64 9e-08
gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum] 63 1e-07
gb|AAK13116.1|AC080019_8 polyprotein [Oryza sativa Japonica Group] 54 1e-07
emb|CAN64875.1| hypothetical protein VITISV_019676 [Vitis vinifera] 62 2e-07
gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica G... 62 3e-07
gb|AAD37020.1| putative retroelement pol polyprotein [Arabidopsi... 62 3e-07
ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599... 62 3e-07
gb|EOY04000.1| Uncharacterized protein TCM_019247 [Theobroma cacao] 62 3e-07
emb|CAN60883.1| hypothetical protein VITISV_008813 [Vitis vinifera] 61 4e-07
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 61 6e-07
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 72.4 bits (176), Expect = 2e-10
Identities = 47/110 (42%), Positives = 59/110 (53%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
+SII DR A FTA F +S KGL +KV+L T FH Q G + I
Sbjct: 1308 ISIISDRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQTDGQA------------ERTIQTL 1355
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ +DFK + D HL LIEF Y +SY +SI M P+EALYG C P
Sbjct: 1356 EDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCRSP 1405
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 72.4 bits (176), Expect = 2e-10
Identities = 47/110 (42%), Positives = 59/110 (53%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
+SII DR A FTA F +S KGL +KV+L T FH Q G + I
Sbjct: 1302 ISIISDRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQTDGQA------------ERTIQTL 1349
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ +DFK + D HL LIEF Y +SY +SI M P+EALYG C P
Sbjct: 1350 EDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCRSP 1399
>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
Length = 1554
Score = 69.7 bits (169), Expect = 1e-09
Identities = 47/110 (42%), Positives = 59/110 (53%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
+SII DR A FTA F +S KGL +KVNL T F+ Q G + I
Sbjct: 1308 ISIISDRGAQFTAQFWKSFKKGLGSKVNLSTAFYPQTDGQA------------ERTIHTL 1355
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ +DFK + D HL LIEF Y +SY +SI M P+EALYG C P
Sbjct: 1356 EDMLRACVIDFKGNWDDHLPLIEFAYNNSYHSSIHMAPYEALYGRRCISP 1405
>gb|EOX94220.1| Uncharacterized protein TCM_003746 [Theobroma cacao]
Length = 267
Score = 56.6 bits (135), Expect(3) = 1e-09
Identities = 38/110 (34%), Positives = 51/110 (46%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F + L TK+ T FH Q G + I
Sbjct: 101 VSIVSDRDPRFTSRFWPKFQEALGTKLKFSTAFHPQTDGQL------------ERTIQTL 148
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ +DF DRHL L+EF Y +S+ + I M P+EALYG C P
Sbjct: 149 EDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSIIGMAPYEALYGRKCRTP 198
Score = 27.3 bits (59), Expect(3) = 1e-09
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 597 LKEPY*YESMKEDVAKSKAKCLL 529
++E Y + SMK DVA+ AKCL+
Sbjct: 40 IRENYWWPSMKRDVAEFVAKCLV 62
Score = 25.0 bits (53), Expect(3) = 1e-09
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 680 DEL*DVIMIQVHNFKYYIHSGPIKMY*T 597
++L IM + H+ Y +H G KMY T
Sbjct: 12 NQLRQAIMEEAHSSAYALHPGSTKMYRT 39
>emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]
Length = 596
Score = 65.5 bits (158), Expect = 2e-08
Identities = 43/110 (39%), Positives = 56/110 (50%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F S K L TK++ T FH Q G + + +I
Sbjct: 299 VSIVSDRDPRFTSRFWHSLQKALGTKLSFSTAFHPQTDGQS------------ERVIQVL 346
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
+ LD + + D HL L+EF Y +S+ ASI MTPFEALYG C P
Sbjct: 347 EDLFRACILDLQGNWDDHLPLVEFAYNNSFQASIGMTPFEALYGRKCRSP 396
>emb|CAN71472.1| hypothetical protein VITISV_040055 [Vitis vinifera]
Length = 374
Score = 64.7 bits (156), Expect = 4e-08
Identities = 41/110 (37%), Positives = 58/110 (52%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F S K L TK++ T FH Q G + +++I
Sbjct: 101 VSIVSDRDPRFTSRFWHSLQKALGTKLSFSTAFHPQTDGQS------------EMVIQVL 148
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ L+ + + D HL L++F Y +S+ ASI MTPFEALYG C P
Sbjct: 149 EDLLRACILELQGNWDDHLPLVKFAYNNSFQASIGMTPFEALYGRKCRSP 198
>emb|CAN74305.1| hypothetical protein VITISV_035483 [Vitis vinifera]
Length = 366
Score = 64.3 bits (155), Expect = 5e-08
Identities = 42/110 (38%), Positives = 56/110 (50%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F S K L TK++ T FH Q G + + +I
Sbjct: 133 VSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTDGQS------------ERVIQVL 180
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
+K LD + + D HL L+EF Y +++ ASI M PFEALYG C P
Sbjct: 181 EDLLKACILDLQGNWDDHLPLVEFAYNNNFQASIEMAPFEALYGRKCRSP 230
>emb|CAN71056.1| hypothetical protein VITISV_016917 [Vitis vinifera]
Length = 303
Score = 64.3 bits (155), Expect = 5e-08
Identities = 42/110 (38%), Positives = 56/110 (50%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F S K L TK++ T FH Q G + + +I
Sbjct: 6 VSIVSDRDPRFTSKFWHSLQKALGTKLSFSTAFHPQTDGQS------------ERVIQVL 53
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ LD + + D HL L+EF Y +S+ ASI M PFEALYG C P
Sbjct: 54 EDLLRACILDLQGNWDDHLPLVEFSYNNSFQASIGMAPFEALYGRKCRSP 103
>emb|CAN68261.1| hypothetical protein VITISV_004267 [Vitis vinifera]
Length = 362
Score = 64.3 bits (155), Expect = 5e-08
Identities = 42/110 (38%), Positives = 56/110 (50%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F S K L TK++ T FH Q G + + +I
Sbjct: 77 VSIVSDRDPRFTSRFWHSLQKALGTKLSFSTAFHPQTDGQS------------ERVIQVL 124
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ LD + + D HL L+EF Y +S+ ASI M PFEALYG C P
Sbjct: 125 EDLLRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSP 174
>emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera]
Length = 855
Score = 63.9 bits (154), Expect = 7e-08
Identities = 44/110 (40%), Positives = 58/110 (52%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F S K L TK++ T FH Q G + K + ++E
Sbjct: 582 VSIMSDRDPRFTSRFWHSLQKDLGTKLSFSTAFHPQTDGQSE----------KVIQVLED 631
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ LD + + D HL LIEF Y +S+ A I MTPFEALYG C P
Sbjct: 632 --LLRACILDLQGNWDDHLPLIEFAYNNSFQAXIGMTPFEALYGRKCRSP 679
>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
Length = 984
Score = 63.5 bits (153), Expect = 9e-08
Identities = 42/110 (38%), Positives = 55/110 (50%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F S K L TK++ T FH Q G + + +I
Sbjct: 687 VSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTDGQS------------ERVIQVL 734
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
+ LD + + D HL L+EF Y +S+ ASI M PFEALYG C P
Sbjct: 735 EDLFRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSP 784
>gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum]
Length = 545
Score = 63.2 bits (152), Expect = 1e-07
Identities = 46/129 (35%), Positives = 65/129 (50%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSII DR + FT+ F ++ + L T+V+L T FH Q G + + + ++E
Sbjct: 84 VSIISDRGSQFTSSFLRAFQEELGTRVHLSTAFHPQTDGQSE----------RTIQVLED 133
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLPDA*R*VRQKS 179
++ +DF D+ L L EF Y +SY +SI M PFEALYG CH P
Sbjct: 134 --MLRACVMDFGGQWDQFLPLAEFAYNNSYHSSIQMAPFEALYGRRCHSP---------- 181
Query: 178 IGWA*SRMP 152
+GW S P
Sbjct: 182 VGWFESTEP 190
>gb|AAK13116.1|AC080019_8 polyprotein [Oryza sativa Japonica Group]
Length = 2162
Score = 53.9 bits (128), Expect(2) = 1e-07
Identities = 37/102 (36%), Positives = 52/102 (50%)
Frame = -3
Query: 532 IIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVETPT 353
I+ DR + FT+ F Q + L T++N T +H Q G T + +I+E
Sbjct: 1726 IVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTE----------RVNLILED-- 1773
Query: 352 QIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYG 227
++ LDF D+ L EF Y +SY AS+ M PFEALYG
Sbjct: 1774 MLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYG 1815
Score = 28.9 bits (63), Expect(2) = 1e-07
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 677 EL*DVIMIQVHNFKYYIHSGPIKMY 603
EL D+I+ + H +Y IH G KMY
Sbjct: 1667 ELKDLILTEAHQTQYSIHPGSTKMY 1691
>emb|CAN64875.1| hypothetical protein VITISV_019676 [Vitis vinifera]
Length = 386
Score = 62.4 bits (150), Expect = 2e-07
Identities = 41/107 (38%), Positives = 55/107 (51%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F S K L TK++ T FH Q G + + +I
Sbjct: 101 VSIVSDRDPHFTSRFWHSLQKALGTKLSFSTAFHPQTDGQS------------ERVIQVL 148
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*C 218
++ LD + + D HL L+EF Y +S+ ASI M PFEALYG C
Sbjct: 149 EDLLRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKC 195
>gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica Group]
Length = 552
Score = 62.0 bits (149), Expect = 3e-07
Identities = 39/109 (35%), Positives = 56/109 (51%)
Frame = -3
Query: 535 SIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVETP 356
SI+ DR + F ++ QS + + TK++L T FH Q G + + I
Sbjct: 259 SIVSDRDSKFVSMLWQSLQRAMGTKISLSTAFHPQTDGQS------------ERTIQTLE 306
Query: 355 TQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ L +K + + HL L+EF Y +SY ASI M PFEALYG C P
Sbjct: 307 DMLRACVLSWKGNWEDHLALVEFAYNNSYQASIKMAPFEALYGRKCVSP 355
>gb|AAD37020.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 949
Score = 62.0 bits (149), Expect = 3e-07
Identities = 40/110 (36%), Positives = 58/110 (52%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F + K L T+VNL T +H Q G + + I
Sbjct: 687 VSIVSDRDTRFTSKFWNAFQKALGTRVNLSTAYHPQTDGQS------------ERTIQTL 734
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ LD+ + +++L LIEF Y +S+ ASI M+P+EALYG C P
Sbjct: 735 EDMLRACVLDWGGNWEKYLRLIEFAYNNSFQASIGMSPYEALYGRACRTP 784
>ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599406 [Solanum tuberosum]
Length = 859
Score = 61.6 bits (148), Expect = 3e-07
Identities = 42/110 (38%), Positives = 58/110 (52%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSII DR FT+ F ++ L T+V+L T FH Q G + + + ++E
Sbjct: 534 VSIISDRGPHFTSSFWRTFQDELGTRVDLCTTFHPQTDGQSE----------RTIKVLED 583
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ +DF D+HL L EF Y +SY +SI M PFEALYG C P
Sbjct: 584 --MLRACVMDFGGQWDQHLPLAEFAYNNSYHSSIQMAPFEALYGRRCRSP 631
>gb|EOY04000.1| Uncharacterized protein TCM_019247 [Theobroma cacao]
Length = 544
Score = 61.6 bits (148), Expect = 3e-07
Identities = 39/110 (35%), Positives = 54/110 (49%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ DR FT+ F + L TK+ T FH QK G + + I
Sbjct: 212 VSIVSDRDPRFTSRFWPKFQEALGTKLRFSTAFHPQKDGQS------------ERTIQTL 259
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
+ + +DF D+HL L+EF Y +S+ +SI M P+EALYG C P
Sbjct: 260 EDMLWAYVIDFIESWDKHLPLVEFAYNNSFQSSIGMAPYEALYGRKCRTP 309
>emb|CAN60883.1| hypothetical protein VITISV_008813 [Vitis vinifera]
Length = 330
Score = 61.2 bits (147), Expect = 4e-07
Identities = 41/110 (37%), Positives = 55/110 (50%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
VSI+ R FT+ F S K L TK++ T FH Q G + + +I
Sbjct: 58 VSIVSHRDPRFTSRFWHSLQKTLGTKLSFSTAFHPQNDGQS------------ERVIQAL 105
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*CHLP 209
++ LD K + D +L L+EF Y +S+ A I MTPFEALYG C P
Sbjct: 106 EDLLRACALDLKGNWDDYLPLVEFAYNNSFQARIGMTPFEALYGRRCRSP 155
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 60.8 bits (146), Expect = 6e-07
Identities = 42/107 (39%), Positives = 54/107 (50%)
Frame = -3
Query: 538 VSIIPDRIA*FTALF*QSCDKGLCTKVNLRTNFHTQKTGMTSG*FRS**LCHKQVIIVET 359
+SII DR FT+ F +S +GL T+V L T FH Q G + I
Sbjct: 1653 LSIISDRGTQFTSHFWKSFQRGLGTRVKLTTAFHPQTDGQA------------ERTIQTL 1700
Query: 358 PTQIKGFNLDFKRHRDRHLILIEFGYIDSYLASI*MTPFEALYGI*C 218
++ L+ K + HL LIEF Y +SY +SI M PFEALYG C
Sbjct: 1701 EDMLRACVLELKGSWEDHLPLIEFSYNNSYHSSIGMAPFEALYGRRC 1747