BLASTX nr result
ID: Atropa21_contig00040250
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00040250 (817 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 95 2e-46 ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 87 8e-42 ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 77 2e-35 ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 87 3e-32 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 80 4e-31 gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 74 4e-30 gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 78 9e-30 gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 83 4e-29 gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 75 7e-29 gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 74 1e-28 gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 81 6e-28 gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 69 7e-28 ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 81 5e-27 gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 68 6e-27 gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 73 1e-26 dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 75 1e-26 gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 69 2e-26 emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis ... 60 4e-26 dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 60 5e-26 dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 60 5e-26 >ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum lycopersicum] Length = 717 Score = 95.1 bits (235), Expect(3) = 2e-46 Identities = 46/92 (50%), Positives = 64/92 (69%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 F F S L ANL KS Y GV + + QI+Q++ +T+ E+PFKYLGVPLSS+KL Sbjct: 518 FTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTI 577 Query: 470 QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 Q PL+EK++ +I W++K LSY+GR QL+K+ Sbjct: 578 QWYPLIEKVMARINSWTAKKLSYAGRAQLVKT 609 Score = 71.6 bits (174), Expect(3) = 2e-46 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 1 MTYVTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNF 180 M V TV+Y++++N G + + K LRQGD MSP++F + M YL+R LK K D +F Sbjct: 423 MKCVKTVNYTIVVN--GQNTQRFDAAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSF 480 Query: 181 NYHPKCSR*ELVHICFADILM 243 YHPK ++ ++ H+CFAD L+ Sbjct: 481 KYHPKYAKLDVTHLCFADDLL 501 Score = 67.4 bits (163), Expect(3) = 2e-46 Identities = 28/71 (39%), Positives = 48/71 (67%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTI 743 V+F +Q WAQ+F++P K+I ++ CR +L + +KKAL++WD +C P+ GGL + Sbjct: 610 VLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGL 669 Query: 744 INFEL*NKKAL 776 IN ++ N+ A+ Sbjct: 670 INLKIWNRSAV 680 >ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max] Length = 506 Score = 87.4 bits (215), Expect(3) = 8e-42 Identities = 45/97 (46%), Positives = 65/97 (67%) Frame = +2 Query: 275 LMM*AFEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSR 454 +MM A+E F + L N +K AG+ K +IL+ F G++PFKYLGVP++S+ Sbjct: 91 MMMRAYESFSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSK 150 Query: 455 KLTI*QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 KL+ PL++KIV KIK W+++LLSY+GRLQL+ S Sbjct: 151 KLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNS 187 Score = 68.2 bits (165), Expect(3) = 8e-42 Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 3/90 (3%) Frame = +1 Query: 1 MTYVTTVSYSLLINWVGGGYRG--VPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDP 174 M V+TVSY +N GY+ + +++ LRQGD +SP +FV+VM LNR L + D Sbjct: 1 MIAVSTVSYRFNVN----GYKTEIMGARRGLRQGDPISPMLFVIVMECLNRYLYKMQKDG 56 Query: 175 NFNYHPKCSR*ELVHICFA-DILM*CRTDK 261 +FNYHPKC + ++ ++CFA D+L+ R DK Sbjct: 57 DFNYHPKCDKLKITNLCFADDLLLFSRGDK 86 Score = 63.2 bits (152), Expect(3) = 8e-42 Identities = 31/71 (43%), Positives = 42/71 (59%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTI 743 V+F + YW F PK V+ + CRIFL T E S+K+ V+W +C PRS GGL I Sbjct: 188 VMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNI 247 Query: 744 INFEL*NKKAL 776 I+ ++ NK L Sbjct: 248 IDIDIWNKANL 258 >ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max] Length = 514 Score = 77.0 bits (188), Expect(3) = 2e-35 Identities = 42/99 (42%), Positives = 62/99 (62%) Frame = +2 Query: 269 MQLMM*AFEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLS 448 +++++ AF +F + L N K + G+ D I + F G +P +YLGVPLS Sbjct: 192 IKMIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLS 251 Query: 449 SRKLTI*QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 +KL + +PLVEKIV KI+ WSSKLLS +GR+QL++S Sbjct: 252 CKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRS 290 Score = 60.8 bits (146), Expect(3) = 2e-35 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Frame = +1 Query: 1 MTYVTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNF 180 M +TTV+Y IN G + +K + QGD +SP +FVL+M Y NR + + +P+F Sbjct: 104 MKVITTVNYRFNIN--GELSNVLETKIGIWQGDPISPLLFVLMMEYFNRIMVKMQRNPSF 161 Query: 181 NYHPKCSR*ELVHICFA-DILM*CRTDK 261 N+H +C R + H+ FA D+ + CR DK Sbjct: 162 NHHSQCERLGITHLSFADDVFLLCRGDK 189 Score = 59.3 bits (142), Expect(3) = 2e-35 Identities = 27/64 (42%), Positives = 39/64 (60%) Frame = +3 Query: 585 YWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTIINFEL*N 764 YW +F +PKKVI + + CR F+ + E +K+LV+W +C P GGL +IN EL N Sbjct: 298 YWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWN 357 Query: 765 KKAL 776 A+ Sbjct: 358 VTAM 361 >ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca subsp. vesca] Length = 958 Score = 86.7 bits (213), Expect(3) = 3e-32 Identities = 41/93 (44%), Positives = 65/93 (69%) Frame = +2 Query: 287 AFEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI 466 AF F ++S L AN+ +S ++AGV + + +LQ F++G P +YLG+PL + KL + Sbjct: 546 AFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRM 605 Query: 467 *QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 C PL+++I T+IK W +K+LS++GRLQLI+S Sbjct: 606 QDCSPLLDRIETRIKSWENKVLSFAGRLQLIQS 638 Score = 55.1 bits (131), Expect(3) = 3e-32 Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*R-KYDPNFNY 186 +++ +S+ +N G+ ++ LRQGD +SPY+FV+ M L+ ++ R P F Y Sbjct: 454 ISSAKFSVCVNGELAGF--FARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRY 511 Query: 187 HPKCSR*ELVHICFA-DILM*CRTDK 261 H +C + L H+CFA D+LM C D+ Sbjct: 512 HWRCDQLNLSHLCFADDLLMFCNGDE 537 Score = 44.7 bits (104), Expect(3) = 3e-32 Identities = 23/64 (35%), Positives = 31/64 (48%) Frame = +3 Query: 576 MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTIINFE 755 +Q YWA +LPKKV+ + R FL V+W +CLP+ GGL I + Sbjct: 643 IQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLH 702 Query: 756 L*NK 767 NK Sbjct: 703 CWNK 706 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 80.5 bits (197), Expect(3) = 4e-31 Identities = 37/92 (40%), Positives = 62/92 (67%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 F+ F S L +LEKS Y+AG++ +N++ F+ G++P +YLG+PL +++L+ Sbjct: 725 FDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTT 784 Query: 470 QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 C+PL+E++ +I W+S+ LSY+GRL LI S Sbjct: 785 DCLPLLEQVRKRIGSWTSRFLSYAGRLNLISS 816 Score = 58.9 bits (141), Expect(3) = 4e-31 Identities = 33/78 (42%), Positives = 45/78 (57%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 +TT S+S+ +N GY S + LRQG +SPY+FV+ M L++ L +F YH Sbjct: 633 ITTASFSVQVNGELAGY--FQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYH 690 Query: 190 PKCSR*ELVHICFADILM 243 PKC L H+ FAD LM Sbjct: 691 PKCKTMGLTHLSFADDLM 708 Score = 43.1 bits (100), Expect(3) = 4e-31 Identities = 20/58 (34%), Positives = 31/58 (53%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGL 737 V++ + +W F LP+K I + C FL + +S KA +SW +C P+ GGL Sbjct: 817 VLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGL 874 >gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] Length = 872 Score = 73.6 bits (179), Expect(3) = 4e-30 Identities = 37/92 (40%), Positives = 58/92 (63%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 F+ F S L +LEKS Y+AGV+ K +I + F +G++P +YLG+PL +++LT Sbjct: 372 FDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSA 431 Query: 470 QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL+E+I +I W+ + S++GR LIKS Sbjct: 432 DYSPLLEQIKKRIATWTFRFFSFAGRFNLIKS 463 Score = 58.9 bits (141), Expect(3) = 4e-30 Identities = 34/78 (43%), Positives = 46/78 (58%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 +TT S+S+ +N GY SK+ LRQG +SPY+FV+ M L++ L F +H Sbjct: 280 ITTASFSVQVNGDLVGY--FQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFH 337 Query: 190 PKCSR*ELVHICFADILM 243 PKC R L H+ FAD LM Sbjct: 338 PKCQRLGLTHLSFADDLM 355 Score = 46.6 bits (109), Expect(3) = 4e-30 Identities = 22/64 (34%), Positives = 36/64 (56%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTI 743 V++ + +W F LP++ I + C FL + SS KA +SWD +C P++ GGL + Sbjct: 464 VLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGL 523 Query: 744 INFE 755 N + Sbjct: 524 RNLK 527 >gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] Length = 740 Score = 78.2 bits (191), Expect(3) = 9e-30 Identities = 39/92 (42%), Positives = 61/92 (66%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 F+ F S L +LEKS Y+AGV++ +N IL F G++P +YLG+PL ++++T Sbjct: 298 FKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTA 357 Query: 470 QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL++K+ +KI W+++ LSY+GRL LI S Sbjct: 358 DYSPLLDKVRSKISSWTARSLSYAGRLALINS 389 Score = 63.2 bits (152), Expect(3) = 9e-30 Identities = 32/78 (41%), Positives = 47/78 (60%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 ++T ++S+ +N G+ G SK+ LRQG +SPY+FV+ M L+ + N YH Sbjct: 206 ISTATFSVQVNGELAGFFG--SKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYH 263 Query: 190 PKCSR*ELVHICFADILM 243 PKC + L H+CFAD LM Sbjct: 264 PKCKKLSLTHLCFADDLM 281 Score = 36.6 bits (83), Expect(3) = 9e-30 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTI 743 VI + +W + LP I + C FL + + KKA ++W ++C + GGL I Sbjct: 390 VIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGI 449 >gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score: 72.31) [Arabidopsis thaliana] Length = 928 Score = 82.8 bits (203), Expect(3) = 4e-29 Identities = 39/89 (43%), Positives = 61/89 (68%) Frame = +2 Query: 299 FLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI*QCM 478 F S L ++EKS Y+AGV +I+Q+ F +G++P +YLG+PL S++LT C+ Sbjct: 616 FAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCL 675 Query: 479 PLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL+E++ KI+ W+S+ LS++GRL LI S Sbjct: 676 PLIEQLRKKIEAWTSRFLSFAGRLNLISS 704 Score = 55.5 bits (132), Expect(3) = 4e-29 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKR-LRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNY 186 +TT S+S+ +N G GV S R LRQG +SPY+FV+ M L++ L F Y Sbjct: 521 ITTASFSVQVN---GELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGY 577 Query: 187 HPKCSR*ELVHICFADILM 243 HPKC L H+ FAD LM Sbjct: 578 HPKCRAIGLTHLSFADDLM 596 Score = 37.4 bits (85), Expect(3) = 4e-29 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +3 Query: 585 YWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPR 722 +W F LP+ I + C FL + SS KA VSW+ +C P+ Sbjct: 712 FWMAAFRLPRACIREIDKLCSAFLWSGTELSSNKAKVSWEAICKPK 757 >gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1529 Score = 75.1 bits (183), Expect(3) = 7e-29 Identities = 38/92 (41%), Positives = 58/92 (63%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 F+ F S L +LEKS Y+AGV+ + Q L F G++P +YLG+PL ++++T Sbjct: 1022 FKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTA 1081 Query: 470 QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL+E + TKI W+++ LSY+GRL L+ S Sbjct: 1082 DYSPLIEAVKTKISSWTARSLSYAGRLALLNS 1113 Score = 60.5 bits (145), Expect(3) = 7e-29 Identities = 31/78 (39%), Positives = 46/78 (58%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 ++T ++S+ +N G+ G S + LRQG +SPY+FV+ M L+ + N YH Sbjct: 930 ISTATFSVQVNGELAGFFG--SSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYH 987 Query: 190 PKCSR*ELVHICFADILM 243 PKC + L H+CFAD LM Sbjct: 988 PKCEKIGLTHLCFADDLM 1005 Score = 39.3 bits (90), Expect(3) = 7e-29 Identities = 22/71 (30%), Positives = 34/71 (47%) Frame = +3 Query: 555 LLKVIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGG 734 L VI + +W + LP I + C FL + + KKA ++W ++C P+ GG Sbjct: 1111 LNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGG 1170 Query: 735 LTIINFEL*NK 767 L I + NK Sbjct: 1171 LGIKSLAEANK 1181 >gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1277 Score = 73.9 bits (180), Expect(3) = 1e-28 Identities = 38/92 (41%), Positives = 59/92 (64%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 F+ F S L +LEKS Y+A V++ +N IL F G++P +YLG PL ++++T Sbjct: 867 FKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTA 926 Query: 470 QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL++K+ +KI W+++ LSY+GRL LI S Sbjct: 927 DYSPLLDKVRSKISSWTARSLSYAGRLALINS 958 Score = 63.5 bits (153), Expect(3) = 1e-28 Identities = 32/78 (41%), Positives = 47/78 (60%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 ++T ++S+ +N G+ G SK+ LRQG +SPY+FV+ M L+ + N YH Sbjct: 775 ISTATFSVQVNSEQAGFFG--SKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYH 832 Query: 190 PKCSR*ELVHICFADILM 243 PKC + L H+CFAD LM Sbjct: 833 PKCKKLSLTHLCFADDLM 850 Score = 36.6 bits (83), Expect(3) = 1e-28 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTI 743 VI + +W + LP I + C FL + + KKA ++W ++C + GGL I Sbjct: 959 VIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGI 1018 >gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] Length = 653 Score = 81.3 bits (199), Expect(3) = 6e-28 Identities = 40/92 (43%), Positives = 61/92 (66%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 F+ F S L ++EKS Y+AGVT+D ++I +F +G++P +YLG+PL +++LT Sbjct: 252 FDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTAT 311 Query: 470 QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL+E I KI W+++ LSY+GRL LI S Sbjct: 312 DYSPLLEHIKKKIGTWTTRYLSYAGRLNLITS 343 Score = 53.5 bits (127), Expect(3) = 6e-28 Identities = 31/81 (38%), Positives = 45/81 (55%) Frame = +1 Query: 1 MTYVTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNF 180 M ++T S+S+ +N G+ SK+ LRQG +SPY+FV+ M L++ L F Sbjct: 157 MLCISTASFSVQVNGELVGF--FQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKF 214 Query: 181 NYHPKCSR*ELVHICFADILM 243 YH +C L H+ FAD LM Sbjct: 215 GYHSRCKELSLTHLSFADDLM 235 Score = 37.0 bits (84), Expect(3) = 6e-28 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = +3 Query: 555 LLKVIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGG 734 + V++ + +W F LP++ I + C FL + + + +K V W +C P+ GG Sbjct: 341 ITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGG 400 Query: 735 L 737 L Sbjct: 401 L 401 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 68.9 bits (167), Expect(3) = 7e-28 Identities = 36/89 (40%), Positives = 56/89 (62%) Frame = +2 Query: 299 FLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI*QCM 478 F + S L N +KS Y+AG+ + ++ F +G +P +YLG+PL +RKL I + Sbjct: 722 FASWSGLKVNKDKSHLYLAGL-NQLESNANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYE 780 Query: 479 PLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL+EKI + + W +K LS++GR+QLI S Sbjct: 781 PLLEKITARFRSWVNKCLSFAGRIQLISS 809 Score = 54.3 bits (129), Expect(3) = 7e-28 Identities = 31/78 (39%), Positives = 45/78 (57%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 ++T ++++ IN GG+ S K LRQGD +SPY+FVL M + L R +YH Sbjct: 627 ISTPTFTVSINGGNGGF--FKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYH 684 Query: 190 PKCSR*ELVHICFADILM 243 PK S + H+ FAD +M Sbjct: 685 PKASNLSISHLMFADDVM 702 Score = 48.1 bits (113), Expect(3) = 7e-28 Identities = 25/58 (43%), Positives = 32/58 (55%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGL 737 VIF +W FLLPK I + + C FL + E +K VSW +CLP+S GGL Sbjct: 810 VIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGL 867 >ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max] Length = 939 Score = 80.9 bits (198), Expect(2) = 5e-27 Identities = 45/101 (44%), Positives = 62/101 (61%) Frame = +2 Query: 263 GFMQLMM*AFEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVP 442 G +Q+M+ F FL L N K Y V + K Q+L F G++PF+YLG+P Sbjct: 529 GSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIP 588 Query: 443 LSSRKLTI*QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 LSS+KL I L++KIV +I WS+ LLSY+GR+QLI+S Sbjct: 589 LSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQS 629 Score = 67.4 bits (163), Expect(2) = 5e-27 Identities = 36/81 (44%), Positives = 52/81 (64%) Frame = +1 Query: 1 MTYVTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNF 180 M V +V+Y IN G R + +++ +RQGD +SP +F+LVM YLNR L PNF Sbjct: 443 MIAVRSVTYVFNIN--GRFTRRLEARRGIRQGDPISPLLFILVMEYLNRILSQLDKIPNF 500 Query: 181 NYHPKCSR*ELVHICFADILM 243 NYH KC + ++ ++CFAD L+ Sbjct: 501 NYHSKCEKMKITNLCFADDLL 521 >gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1216 Score = 68.2 bits (165), Expect(3) = 6e-27 Identities = 31/79 (39%), Positives = 53/79 (67%) Frame = +2 Query: 329 LEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI*QCMPLVEKIVTKI 508 +EK+ Y+AGV+D + + F +G++P +YLG+PL +++LT PL+++I +I Sbjct: 459 MEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRI 518 Query: 509 KCWSSKLLSYSGRLQLIKS 565 W+S+ LS++GRL LI S Sbjct: 519 GMWTSRYLSFAGRLSLINS 537 Score = 60.5 bits (145), Expect(3) = 6e-27 Identities = 36/92 (39%), Positives = 51/92 (55%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 ++T S+S+ +N GY S + LRQG +SPY+FV+ M L+R L F YH Sbjct: 354 MSTASFSIQVNGELAGY--FRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYH 411 Query: 190 PKCSR*ELVHICFADILM*CRTDKGFHAIDDV 285 P+C L H+CFAD LM TD ++D + Sbjct: 412 PRCKTLGLTHLCFADDLM-ILTDGKIRSVDGI 442 Score = 39.7 bits (91), Expect(3) = 6e-27 Identities = 21/68 (30%), Positives = 34/68 (50%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTI 743 V++ + +W F LP++ I + L + + KKA VSWD +C P+ GGL + Sbjct: 538 VLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGL 597 Query: 744 INFEL*NK 767 + NK Sbjct: 598 QSLREANK 605 >gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 73.2 bits (178), Expect(3) = 1e-26 Identities = 44/113 (38%), Positives = 60/113 (53%) Frame = +2 Query: 227 LLIYSCDAEQIRGFMQLMM*AFEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFT 406 ++ Y A +RG ++ E F +S L N EKS Y AG+ D K L F Sbjct: 701 MIFYDGKASSLRGIKSVL----ESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLA-FGFV 755 Query: 407 MGEIPFKYLGVPLSSRKLTI*QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 G PF+YLG+PL RKL L++KI + W++K LS++GRLQLI S Sbjct: 756 NGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISS 808 Score = 51.2 bits (121), Expect(3) = 1e-26 Identities = 30/78 (38%), Positives = 45/78 (57%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 +T+ S+S+ ++ GY K LRQGD +SP +FV+ M L+R L+ + D + YH Sbjct: 626 ITSTSFSINVSGSLCGY--FKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYH 683 Query: 190 PKCSR*ELVHICFADILM 243 PK S + + FAD LM Sbjct: 684 PKASEVRISSLAFADDLM 701 Score = 42.7 bits (99), Expect(3) = 1e-26 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKA--LVSWDTMCLPRSAGGL 737 VI+ +W F+LPK + + C FL N+ +++ VSW CLP++ GGL Sbjct: 809 VIYSTVNFWLSSFILPKCCLKTIEQMCNRFL--WGNDITRRGDIKVSWQNSCLPKAEGGL 866 Query: 738 TIINFEL*NK 767 + NF NK Sbjct: 867 GLRNFWTWNK 876 >dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 489 Score = 74.7 bits (182), Expect(3) = 1e-26 Identities = 37/92 (40%), Positives = 57/92 (61%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 FE F S L ++EKS Y AG++ +++ F +G +P +YLG+PL +++L+ Sbjct: 107 FETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSST 166 Query: 470 QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 +PL+E I KI WS++ LSY+GRL LI S Sbjct: 167 DYLPLIEHIKKKIGSWSARFLSYAGRLNLISS 198 Score = 55.5 bits (132), Expect(3) = 1e-26 Identities = 33/81 (40%), Positives = 45/81 (55%) Frame = +1 Query: 1 MTYVTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNF 180 M VTT S+ + +N GY S + LRQG +SPY+FV+ M L++ L F Sbjct: 12 MLCVTTASFLVQVNGELAGYFN--STRGLRQGCSLSPYLFVVSMNVLSKLLDKATGQRRF 69 Query: 181 NYHPKCSR*ELVHICFADILM 243 YHP+C + L H+ FAD LM Sbjct: 70 GYHPRCKQMGLTHLSFADDLM 90 Score = 37.0 bits (84), Expect(3) = 1e-26 Identities = 16/58 (27%), Positives = 32/58 (55%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGL 737 V++ + +W F LP++ I + C +L + + ++ KA ++W +C P+ GGL Sbjct: 199 VLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGL 256 >gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13) [Arabidopsis thaliana] Length = 1164 Score = 68.9 bits (167), Expect(3) = 2e-26 Identities = 37/93 (39%), Positives = 56/93 (60%) Frame = +2 Query: 287 AFEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI 466 + E F S L N K+ Y AG++ ++ + F +G +P +YLG+PL SRKLTI Sbjct: 615 SLEDFAGWSGLLMNTNKTQLYHAGLSQS-ESDSMASYGFKLGSLPVRYLGLPLMSRKLTI 673 Query: 467 *QCMPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 + PL+EKI + W +LLS++GR+QL+ S Sbjct: 674 AEYAPLIEKITARFNSWVVRLLSFAGRVQLLAS 706 Score = 56.6 bits (135), Expect(3) = 2e-26 Identities = 33/78 (42%), Positives = 47/78 (60%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 ++T S+S+++N G+ S K LRQGD MSPY+FVL M + L+ R YH Sbjct: 524 LSTASFSVILNGHSAGHFW--SSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYH 581 Query: 190 PKCSR*ELVHICFADILM 243 PK S+ E+ H+ FAD +M Sbjct: 582 PKTSQLEISHLMFADDVM 599 Score = 41.2 bits (95), Expect(3) = 2e-26 Identities = 21/71 (29%), Positives = 36/71 (50%) Frame = +3 Query: 555 LLKVIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGG 734 L VI + +W F+LP I + + C FL + + A V+W +CLP++ GG Sbjct: 704 LASVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGG 763 Query: 735 LTIINFEL*NK 767 + + F + N+ Sbjct: 764 IGLRRFAVSNR 774 >emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis thaliana] gi|7268153|emb|CAB78489.1| reverse transcriptase like protein [Arabidopsis thaliana] Length = 318 Score = 60.1 bits (144), Expect(3) = 4e-26 Identities = 35/81 (43%), Positives = 46/81 (56%) Frame = +1 Query: 1 MTYVTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNF 180 M VTT S+S+ +N GY S + LRQG +SPY+FV+VM L++ L F Sbjct: 66 MLCVTTASFSVQVNGELAGYFN--SSRGLRQGCSLSPYLFVIVMDVLSKKLDRAAGLRKF 123 Query: 181 NYHPKCSR*ELVHICFADILM 243 YHPKC L H+ FAD +M Sbjct: 124 GYHPKCKNLGLTHLSFADDIM 144 Score = 59.3 bits (142), Expect(3) = 4e-26 Identities = 26/83 (31%), Positives = 53/83 (63%) Frame = +2 Query: 290 FEYFLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMRFTMGEIPFKYLGVPLSSRKLTI* 469 F+ F S L ++EK+ Y+AG++D + + ++ F +G +P +YLG+PL +++LT Sbjct: 161 FDSFAKQSCLKISMEKTTIYLAGISDTVRQEFEEQFHFEVGCLPVRYLGLPLVTKRLTSQ 220 Query: 470 QCMPLVEKIVTKIKCWSSKLLSY 538 PL+E+I +I W++++ ++ Sbjct: 221 DYNPLLEQIKRRIGTWTARICNF 243 Score = 46.2 bits (108), Expect(3) = 4e-26 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +3 Query: 585 YWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGL 737 +W F LP++ I + C FL + S+KKA ++WDT+C P+ GGL Sbjct: 243 FWLSAFRLPRECIREIDKLCSAFLWSGPELSTKKAKIAWDTICRPKQEGGL 293 >dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] Length = 1072 Score = 60.1 bits (144), Expect(3) = 5e-26 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 1/90 (1%) Frame = +2 Query: 299 FLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMR-FTMGEIPFKYLGVPLSSRKLTI*QC 475 F S L N +KS + AG+ D +I F G P +YLG+PL RKL I Sbjct: 582 FADWSGLKVNKDKSQLFQAGL--DLSERITSAAYGFPAGTFPIRYLGLPLMCRKLRIADY 639 Query: 476 MPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL+EK+ +++ W SK LS++GR QLI S Sbjct: 640 GPLLEKLSARLRSWVSKALSFAGRTQLISS 669 Score = 55.5 bits (132), Expect(3) = 5e-26 Identities = 31/78 (39%), Positives = 45/78 (57%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 +TT S+++ +N GG+ S K LRQGD +SPY+FVL M ++ L R +YH Sbjct: 487 ITTPSFTISVNGATGGF--FRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYH 544 Query: 190 PKCSR*ELVHICFADILM 243 PK + H+ FAD +M Sbjct: 545 PKAGDLSISHLMFADDVM 562 Score = 49.7 bits (117), Expect(3) = 5e-26 Identities = 28/71 (39%), Positives = 36/71 (50%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTI 743 VIF + +W FLLPK I + + C FL + K + VSW CLP+S GGL Sbjct: 670 VIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGF 729 Query: 744 INFEL*NKKAL 776 +F NK L Sbjct: 730 RSFGEWNKTLL 740 >dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] Length = 1072 Score = 60.1 bits (144), Expect(3) = 5e-26 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 1/90 (1%) Frame = +2 Query: 299 FLTVSRL*ANLEKSFFYVAGVTDDFKNQILQEMR-FTMGEIPFKYLGVPLSSRKLTI*QC 475 F S L N +KS + AG+ D +I F G P +YLG+PL RKL I Sbjct: 582 FADWSGLKVNKDKSQLFQAGL--DLSERITSAAYGFPAGTFPIRYLGLPLMCRKLRIADY 639 Query: 476 MPLVEKIVTKIKCWSSKLLSYSGRLQLIKS 565 PL+EK+ +++ W SK LS++GR QLI S Sbjct: 640 GPLLEKLSARLRSWVSKALSFAGRTQLISS 669 Score = 55.5 bits (132), Expect(3) = 5e-26 Identities = 31/78 (39%), Positives = 45/78 (57%) Frame = +1 Query: 10 VTTVSYSLLINWVGGGYRGVPSKKRLRQGDYMSPYVFVLVM*YLNRSLK*RKYDPNFNYH 189 +TT S+++ +N GG+ S K LRQGD +SPY+FVL M ++ L R +YH Sbjct: 487 ITTPSFTISVNGATGGF--FRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYH 544 Query: 190 PKCSR*ELVHICFADILM 243 PK + H+ FAD +M Sbjct: 545 PKAGDLSISHLMFADDVM 562 Score = 49.7 bits (117), Expect(3) = 5e-26 Identities = 28/71 (39%), Positives = 36/71 (50%) Frame = +3 Query: 564 VIF*MQTYWAQIFLLPKKVIAIVRTACRIFL*TMCNESSKKALVSWDTMCLPRSAGGLTI 743 VIF + +W FLLPK I + + C FL + K + VSW CLP+S GGL Sbjct: 670 VIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGF 729 Query: 744 INFEL*NKKAL 776 +F NK L Sbjct: 730 RSFGEWNKTLL 740