BLASTX nr result
ID: Atropa21_contig00040230
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00040230 (533 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006350524.1| PREDICTED: KH domain-containing protein At4g... 136 3e-30 ref|XP_004234980.1| PREDICTED: KH domain-containing protein At4g... 131 8e-29 gb|EMJ20144.1| hypothetical protein PRUPE_ppa002491mg [Prunus pe... 99 5e-19 ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g... 93 3e-17 ref|XP_004502677.1| PREDICTED: KH domain-containing protein At4g... 92 6e-17 ref|XP_004502676.1| PREDICTED: KH domain-containing protein At4g... 92 6e-17 gb|EOY23588.1| RNA-binding KH domain-containing protein [Theobro... 91 2e-16 ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatul... 87 2e-15 gb|EPS68840.1| hypothetical protein M569_05927, partial [Genlise... 87 2e-15 ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g... 84 2e-14 ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g... 84 3e-14 gb|ESW08501.1| hypothetical protein PHAVU_009G051000g [Phaseolus... 82 6e-14 dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana] 81 1e-13 ref|NP_001190526.1| RNA-binding KH domain-containing protein [Ar... 81 1e-13 ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabi... 81 1e-13 gb|EXC21425.1| hypothetical protein L484_011867 [Morus notabilis] 81 2e-13 ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arab... 81 2e-13 ref|XP_006401750.1| hypothetical protein EUTSA_v10012933mg [Eutr... 80 2e-13 ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g... 80 2e-13 ref|XP_006491994.1| PREDICTED: KH domain-containing protein At4g... 77 2e-12 >ref|XP_006350524.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum tuberosum] Length = 669 Score = 136 bits (342), Expect = 3e-30 Identities = 65/76 (85%), Positives = 70/76 (92%), Gaps = 2/76 (2%) Frame = +2 Query: 311 MDRSRSKRYYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGG--RKMQDPSLM 484 MDRSRSKRYYYDQDY+S+NLPRTKQRY+ +HYAPTHHRRPVSGGGG RKMQDP+LM Sbjct: 1 MDRSRSKRYYYDQDYESENLPRTKQRYN--NPHHYAPTHHRRPVSGGGGGGRKMQDPALM 58 Query: 485 VTTTYRILCHDVKAGG 532 VTTTYRILCHDVKAGG Sbjct: 59 VTTTYRILCHDVKAGG 74 >ref|XP_004234980.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum lycopersicum] Length = 668 Score = 131 bits (330), Expect = 8e-29 Identities = 65/77 (84%), Positives = 70/77 (90%), Gaps = 3/77 (3%) Frame = +2 Query: 311 MDRSRSKRYYYDQDYDSDNLPRTKQRYDPRGNYHYAPT-HHRRPVS--GGGGRKMQDPSL 481 MDRSRSKRYYYDQDY+S+NLPRTKQRY+ +HYAPT HHRRPVS GGGGRKMQDP+L Sbjct: 1 MDRSRSKRYYYDQDYESENLPRTKQRYN--NPHHYAPTAHHRRPVSGGGGGGRKMQDPAL 58 Query: 482 MVTTTYRILCHDVKAGG 532 MVTTTYRILCHDVKAGG Sbjct: 59 MVTTTYRILCHDVKAGG 75 >gb|EMJ20144.1| hypothetical protein PRUPE_ppa002491mg [Prunus persica] Length = 667 Score = 99.4 bits (246), Expect = 5e-19 Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 10/84 (11%) Frame = +2 Query: 311 MDRSRSKRYYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGG----------R 460 M+RSRSKRYYYDQDYD++ + RT+ RY N+HYA +HR SGGGG + Sbjct: 1 MERSRSKRYYYDQDYDTETVGRTRPRY----NHHYATNNHRHRGSGGGGGGGGGGGRPSK 56 Query: 461 KMQDPSLMVTTTYRILCHDVKAGG 532 QDPS+ VTTTYRILCHD+KAGG Sbjct: 57 PQQDPSITVTTTYRILCHDMKAGG 80 >ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis vinifera] Length = 661 Score = 93.2 bits (230), Expect = 3e-17 Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 6/80 (7%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNY---HYAPTHHRRPVSGGGGR--KMQD 472 MDRSRSKR Y+Y+QDYDS+ L RTK RY+ N+ HY H R G GR K+QD Sbjct: 1 MDRSRSKRGYFYEQDYDSETLGRTKPRYNNNNNHGGHHYNTNSHHRRGGAGAGRASKLQD 60 Query: 473 PSLMVTTTYRILCHDVKAGG 532 S+MVTT+YRILCHDVKAGG Sbjct: 61 SSVMVTTSYRILCHDVKAGG 80 >ref|XP_004502677.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2 [Cicer arietinum] Length = 648 Score = 92.4 bits (228), Expect = 6e-17 Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 4/78 (5%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHR-RPVSGGGGR--KMQDPS 478 M+RSRSKR YYYDQDYDS+ L RT+ RY N+HY HR R GGGGR K QD S Sbjct: 1 MERSRSKRNYYYDQDYDSETLARTRPRY----NHHYNTNSHRYRGGGGGGGRHLKTQDSS 56 Query: 479 LMVTTTYRILCHDVKAGG 532 L VTT+YRILCHD+KAGG Sbjct: 57 LTVTTSYRILCHDLKAGG 74 >ref|XP_004502676.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1 [Cicer arietinum] Length = 676 Score = 92.4 bits (228), Expect = 6e-17 Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 4/78 (5%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHR-RPVSGGGGR--KMQDPS 478 M+RSRSKR YYYDQDYDS+ L RT+ RY N+HY HR R GGGGR K QD S Sbjct: 1 MERSRSKRNYYYDQDYDSETLARTRPRY----NHHYNTNSHRYRGGGGGGGRHLKTQDSS 56 Query: 479 LMVTTTYRILCHDVKAGG 532 L VTT+YRILCHD+KAGG Sbjct: 57 LTVTTSYRILCHDLKAGG 74 >gb|EOY23588.1| RNA-binding KH domain-containing protein [Theobroma cacao] Length = 675 Score = 90.5 bits (223), Expect = 2e-16 Identities = 51/91 (56%), Positives = 59/91 (64%), Gaps = 17/91 (18%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHR--------------RPVS 445 M+RSRSKR YYYDQDYD +N+ RTK RY+ N+HY P HR RP + Sbjct: 1 MERSRSKRNYYYDQDYDGENMGRTKPRYN---NHHYLPNSHRHRGNNPNNNNGNNGRPSN 57 Query: 446 --GGGGRKMQDPSLMVTTTYRILCHDVKAGG 532 G GG QD SLMVTT+YRILCHD+KAGG Sbjct: 58 KGGSGGGGGQDSSLMVTTSYRILCHDMKAGG 88 >ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula] gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula] Length = 646 Score = 87.4 bits (215), Expect = 2e-15 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 3/77 (3%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGR--KMQDPSL 481 M+RSRSKR YYYDQDYDS+ + RT+ RY+ ++H+ +H R GGGGR K QD L Sbjct: 1 MERSRSKRSYYYDQDYDSETVARTRPRYN-HHHHHHRDSHRHRGGVGGGGRHYKTQDSPL 59 Query: 482 MVTTTYRILCHDVKAGG 532 VTT+YR+LCHD++AGG Sbjct: 60 TVTTSYRLLCHDLRAGG 76 >gb|EPS68840.1| hypothetical protein M569_05927, partial [Genlisea aurea] Length = 541 Score = 87.0 bits (214), Expect = 2e-15 Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 9/83 (10%) Frame = +2 Query: 311 MDRSRSKRYYYDQDYDSDNL-PRTKQRYDPR------GNYHYAPTHHRR--PVSGGGGRK 463 M+RSRSKRYY+DQDYDS+ PR K RY G +HY + RR P +GGGG + Sbjct: 5 MERSRSKRYYHDQDYDSEPFQPRNKPRYGSNSQGGGVGAHHYPAGYDRRISPAAGGGGPR 64 Query: 464 MQDPSLMVTTTYRILCHDVKAGG 532 S+MVTT+YRILCHD KAGG Sbjct: 65 KTHDSVMVTTSYRILCHDAKAGG 87 >ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] Length = 647 Score = 84.3 bits (207), Expect = 2e-14 Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 4/78 (5%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGRK---MQDPS 478 M+RSRSKR YYYDQDYDS+ L RT+ RY N+HY ++R GG R QD Sbjct: 1 MERSRSKRNYYYDQDYDSETLARTRPRY----NHHYTTAGNQRHRGGGAARHAKTQQDSP 56 Query: 479 LMVTTTYRILCHDVKAGG 532 L VTT+YRILCHD+KAGG Sbjct: 57 LTVTTSYRILCHDLKAGG 74 >ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] Length = 644 Score = 83.6 bits (205), Expect = 3e-14 Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 4/78 (5%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGRK---MQDPS 478 M+RSRSKR YYYDQDYDS+ L RT+ RY N+HY+ + R GG R QD Sbjct: 1 MERSRSKRNYYYDQDYDSETLARTRPRY----NHHYSTGGNHRHRGGGAARHAKTQQDSP 56 Query: 479 LMVTTTYRILCHDVKAGG 532 L VTT+YRILCHD+KAGG Sbjct: 57 LTVTTSYRILCHDLKAGG 74 >gb|ESW08501.1| hypothetical protein PHAVU_009G051000g [Phaseolus vulgaris] Length = 644 Score = 82.4 bits (202), Expect = 6e-14 Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 3/77 (3%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGR--KMQDPSL 481 M+RSRSKR YYY+QDYDS+ + RT+ RY N+HY+ GGG R K QD L Sbjct: 1 MERSRSKRNYYYEQDYDSETVARTRPRY----NHHYSAGAGNHRHRGGGARHAKAQDSQL 56 Query: 482 MVTTTYRILCHDVKAGG 532 VTT+YRILCHD+KAGG Sbjct: 57 SVTTSYRILCHDMKAGG 73 >dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana] Length = 660 Score = 81.3 bits (199), Expect = 1e-13 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHY-----APTHHRRPVSGGGGR---K 463 M+RSRSKR Y+YDQDYD D++PR+K RY+ NYH+ +R GGGG Sbjct: 1 MERSRSKRNYHYDQDYDGDSMPRSKPRYN--NNYHFGGGGGGNNRYRGGGGGGGGNGRPS 58 Query: 464 MQDPSLMVTTTYRILCHDVKAGG 532 P M TTTYRILCHD KAGG Sbjct: 59 KSHPETMATTTYRILCHDAKAGG 81 >ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana] gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana] Length = 198 Score = 81.3 bits (199), Expect = 1e-13 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHY-----APTHHRRPVSGGGGR---K 463 M+RSRSKR Y+YDQDYD D++PR+K RY+ NYH+ +R GGGG Sbjct: 1 MERSRSKRNYHYDQDYDGDSMPRSKPRYN--NNYHFGGGGGGNNRYRGGGGGGGGNGRPS 58 Query: 464 MQDPSLMVTTTYRILCHDVKAGG 532 P M TTTYRILCHD KAGG Sbjct: 59 KSHPETMATTTYRILCHDAKAGG 81 >ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana] gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana] gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana] gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana] Length = 652 Score = 81.3 bits (199), Expect = 1e-13 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHY-----APTHHRRPVSGGGGR---K 463 M+RSRSKR Y+YDQDYD D++PR+K RY+ NYH+ +R GGGG Sbjct: 1 MERSRSKRNYHYDQDYDGDSMPRSKPRYN--NNYHFGGGGGGNNRYRGGGGGGGGNGRPS 58 Query: 464 MQDPSLMVTTTYRILCHDVKAGG 532 P M TTTYRILCHD KAGG Sbjct: 59 KSHPETMATTTYRILCHDAKAGG 81 >gb|EXC21425.1| hypothetical protein L484_011867 [Morus notabilis] Length = 1349 Score = 80.9 bits (198), Expect = 2e-13 Identities = 48/96 (50%), Positives = 56/96 (58%), Gaps = 22/96 (22%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTH----HRRPVSGGGGR----- 460 M+RSRSKR YYYDQDYDS+ + RT+ RY N+HY + HR V GGG Sbjct: 1 MERSRSKRNYYYDQDYDSETVVRTRPRY----NHHYGANNNHHRHRGSVGAGGGGGGGVG 56 Query: 461 ------------KMQDPSLMVTTTYRILCHDVKAGG 532 + QD SL VTT+YRILCHDVKAGG Sbjct: 57 GVGGGRVSSNKPQQQDQSLTVTTSYRILCHDVKAGG 92 >ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp. lyrata] gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp. lyrata] Length = 652 Score = 80.9 bits (198), Expect = 2e-13 Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 10/84 (11%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAP------THHRRPVSGGGGR--- 460 M+RSRSKR Y+YDQDYD D++PR+K RY+ NYH+ +R GGGG Sbjct: 1 MERSRSKRNYHYDQDYDGDSMPRSKPRYN--NNYHFGGGGGGGNNRYRGGGGGGGGNGRP 58 Query: 461 KMQDPSLMVTTTYRILCHDVKAGG 532 P M TTTYRILCHD KAGG Sbjct: 59 SKSHPETMATTTYRILCHDAKAGG 82 >ref|XP_006401750.1| hypothetical protein EUTSA_v10012933mg [Eutrema salsugineum] gi|557102840|gb|ESQ43203.1| hypothetical protein EUTSA_v10012933mg [Eutrema salsugineum] Length = 647 Score = 80.5 bits (197), Expect = 2e-13 Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 6/80 (7%) Frame = +2 Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGG-----RKMQD 472 M+RSRSKR Y+YDQDYD D++ R+K RY+ NYH+ + R GGGG Sbjct: 1 MERSRSKRNYHYDQDYDGDSMGRSKPRYNNNNNYHFGGGGNNRYRGGGGGGGNSRPSKSH 60 Query: 473 PSLMVTTTYRILCHDVKAGG 532 P M TTTYR+LC D KAGG Sbjct: 61 PETMATTTYRVLCLDAKAGG 80 >ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis sativus] gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis sativus] Length = 666 Score = 80.5 bits (197), Expect = 2e-13 Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 2/76 (2%) Frame = +2 Query: 311 MDRSRSKR-YYYD-QDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGRKMQDPSLM 484 M++SRSKR YYYD QD+DSD++ RT+ RY+ N HY ++R + K QD SLM Sbjct: 1 MEKSRSKRNYYYDHQDFDSDSMGRTRPRYN---NNHYPNNNYRHRGNAVRPSKPQDQSLM 57 Query: 485 VTTTYRILCHDVKAGG 532 VTTTYRILCHD KAGG Sbjct: 58 VTTTYRILCHDAKAGG 73 >ref|XP_006491994.1| PREDICTED: KH domain-containing protein At4g18375-like [Citrus sinensis] Length = 678 Score = 77.0 bits (188), Expect = 2e-12 Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 18/92 (19%) Frame = +2 Query: 311 MDRSRSKR-YYYD-QDYDSDNLPRTKQRYD----PRGNYHYAPTHHRRP---------VS 445 MDRSRSKR YYYD QDYD D + RTK RY+ P NY + ++ ++ Sbjct: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60 Query: 446 GGGGR---KMQDPSLMVTTTYRILCHDVKAGG 532 R +DPSLMVTTTYRILCHD+KAGG Sbjct: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGG 92