BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040230
         (533 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350524.1| PREDICTED: KH domain-containing protein At4g...   136   3e-30
ref|XP_004234980.1| PREDICTED: KH domain-containing protein At4g...   131   8e-29
gb|EMJ20144.1| hypothetical protein PRUPE_ppa002491mg [Prunus pe...    99   5e-19
ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g...    93   3e-17
ref|XP_004502677.1| PREDICTED: KH domain-containing protein At4g...    92   6e-17
ref|XP_004502676.1| PREDICTED: KH domain-containing protein At4g...    92   6e-17
gb|EOY23588.1| RNA-binding KH domain-containing protein [Theobro...    91   2e-16
ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatul...    87   2e-15
gb|EPS68840.1| hypothetical protein M569_05927, partial [Genlise...    87   2e-15
ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g...    84   2e-14
ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g...    84   3e-14
gb|ESW08501.1| hypothetical protein PHAVU_009G051000g [Phaseolus...    82   6e-14
dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]        81   1e-13
ref|NP_001190526.1| RNA-binding KH domain-containing protein [Ar...    81   1e-13
ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabi...    81   1e-13
gb|EXC21425.1| hypothetical protein L484_011867 [Morus notabilis]      81   2e-13
ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arab...    81   2e-13
ref|XP_006401750.1| hypothetical protein EUTSA_v10012933mg [Eutr...    80   2e-13
ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g...    80   2e-13
ref|XP_006491994.1| PREDICTED: KH domain-containing protein At4g...    77   2e-12

>ref|XP_006350524.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
           tuberosum]
          Length = 669

 Score =  136 bits (342), Expect = 3e-30
 Identities = 65/76 (85%), Positives = 70/76 (92%), Gaps = 2/76 (2%)
 Frame = +2

Query: 311 MDRSRSKRYYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGG--RKMQDPSLM 484
           MDRSRSKRYYYDQDY+S+NLPRTKQRY+    +HYAPTHHRRPVSGGGG  RKMQDP+LM
Sbjct: 1   MDRSRSKRYYYDQDYESENLPRTKQRYN--NPHHYAPTHHRRPVSGGGGGGRKMQDPALM 58

Query: 485 VTTTYRILCHDVKAGG 532
           VTTTYRILCHDVKAGG
Sbjct: 59  VTTTYRILCHDVKAGG 74


>ref|XP_004234980.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
           lycopersicum]
          Length = 668

 Score =  131 bits (330), Expect = 8e-29
 Identities = 65/77 (84%), Positives = 70/77 (90%), Gaps = 3/77 (3%)
 Frame = +2

Query: 311 MDRSRSKRYYYDQDYDSDNLPRTKQRYDPRGNYHYAPT-HHRRPVS--GGGGRKMQDPSL 481
           MDRSRSKRYYYDQDY+S+NLPRTKQRY+    +HYAPT HHRRPVS  GGGGRKMQDP+L
Sbjct: 1   MDRSRSKRYYYDQDYESENLPRTKQRYN--NPHHYAPTAHHRRPVSGGGGGGRKMQDPAL 58

Query: 482 MVTTTYRILCHDVKAGG 532
           MVTTTYRILCHDVKAGG
Sbjct: 59  MVTTTYRILCHDVKAGG 75


>gb|EMJ20144.1| hypothetical protein PRUPE_ppa002491mg [Prunus persica]
          Length = 667

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 10/84 (11%)
 Frame = +2

Query: 311 MDRSRSKRYYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGG----------R 460
           M+RSRSKRYYYDQDYD++ + RT+ RY    N+HYA  +HR   SGGGG          +
Sbjct: 1   MERSRSKRYYYDQDYDTETVGRTRPRY----NHHYATNNHRHRGSGGGGGGGGGGGRPSK 56

Query: 461 KMQDPSLMVTTTYRILCHDVKAGG 532
             QDPS+ VTTTYRILCHD+KAGG
Sbjct: 57  PQQDPSITVTTTYRILCHDMKAGG 80


>ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 661

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 6/80 (7%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNY---HYAPTHHRRPVSGGGGR--KMQD 472
           MDRSRSKR Y+Y+QDYDS+ L RTK RY+   N+   HY    H R    G GR  K+QD
Sbjct: 1   MDRSRSKRGYFYEQDYDSETLGRTKPRYNNNNNHGGHHYNTNSHHRRGGAGAGRASKLQD 60

Query: 473 PSLMVTTTYRILCHDVKAGG 532
            S+MVTT+YRILCHDVKAGG
Sbjct: 61  SSVMVTTSYRILCHDVKAGG 80


>ref|XP_004502677.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2
           [Cicer arietinum]
          Length = 648

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHR-RPVSGGGGR--KMQDPS 478
           M+RSRSKR YYYDQDYDS+ L RT+ RY    N+HY    HR R   GGGGR  K QD S
Sbjct: 1   MERSRSKRNYYYDQDYDSETLARTRPRY----NHHYNTNSHRYRGGGGGGGRHLKTQDSS 56

Query: 479 LMVTTTYRILCHDVKAGG 532
           L VTT+YRILCHD+KAGG
Sbjct: 57  LTVTTSYRILCHDLKAGG 74


>ref|XP_004502676.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Cicer arietinum]
          Length = 676

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHR-RPVSGGGGR--KMQDPS 478
           M+RSRSKR YYYDQDYDS+ L RT+ RY    N+HY    HR R   GGGGR  K QD S
Sbjct: 1   MERSRSKRNYYYDQDYDSETLARTRPRY----NHHYNTNSHRYRGGGGGGGRHLKTQDSS 56

Query: 479 LMVTTTYRILCHDVKAGG 532
           L VTT+YRILCHD+KAGG
Sbjct: 57  LTVTTSYRILCHDLKAGG 74


>gb|EOY23588.1| RNA-binding KH domain-containing protein [Theobroma cacao]
          Length = 675

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 51/91 (56%), Positives = 59/91 (64%), Gaps = 17/91 (18%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHR--------------RPVS 445
           M+RSRSKR YYYDQDYD +N+ RTK RY+   N+HY P  HR              RP +
Sbjct: 1   MERSRSKRNYYYDQDYDGENMGRTKPRYN---NHHYLPNSHRHRGNNPNNNNGNNGRPSN 57

Query: 446 --GGGGRKMQDPSLMVTTTYRILCHDVKAGG 532
             G GG   QD SLMVTT+YRILCHD+KAGG
Sbjct: 58  KGGSGGGGGQDSSLMVTTSYRILCHDMKAGG 88


>ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
           gi|355491329|gb|AES72532.1| Poly(rC)-binding protein
           [Medicago truncatula]
          Length = 646

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGR--KMQDPSL 481
           M+RSRSKR YYYDQDYDS+ + RT+ RY+   ++H+  +H  R   GGGGR  K QD  L
Sbjct: 1   MERSRSKRSYYYDQDYDSETVARTRPRYN-HHHHHHRDSHRHRGGVGGGGRHYKTQDSPL 59

Query: 482 MVTTTYRILCHDVKAGG 532
            VTT+YR+LCHD++AGG
Sbjct: 60  TVTTSYRLLCHDLRAGG 76


>gb|EPS68840.1| hypothetical protein M569_05927, partial [Genlisea aurea]
          Length = 541

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 9/83 (10%)
 Frame = +2

Query: 311 MDRSRSKRYYYDQDYDSDNL-PRTKQRYDPR------GNYHYAPTHHRR--PVSGGGGRK 463
           M+RSRSKRYY+DQDYDS+   PR K RY         G +HY   + RR  P +GGGG +
Sbjct: 5   MERSRSKRYYHDQDYDSEPFQPRNKPRYGSNSQGGGVGAHHYPAGYDRRISPAAGGGGPR 64

Query: 464 MQDPSLMVTTTYRILCHDVKAGG 532
               S+MVTT+YRILCHD KAGG
Sbjct: 65  KTHDSVMVTTSYRILCHDAKAGG 87


>ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 647

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGRK---MQDPS 478
           M+RSRSKR YYYDQDYDS+ L RT+ RY    N+HY    ++R   GG  R     QD  
Sbjct: 1   MERSRSKRNYYYDQDYDSETLARTRPRY----NHHYTTAGNQRHRGGGAARHAKTQQDSP 56

Query: 479 LMVTTTYRILCHDVKAGG 532
           L VTT+YRILCHD+KAGG
Sbjct: 57  LTVTTSYRILCHDLKAGG 74


>ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 644

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGRK---MQDPS 478
           M+RSRSKR YYYDQDYDS+ L RT+ RY    N+HY+   + R   GG  R     QD  
Sbjct: 1   MERSRSKRNYYYDQDYDSETLARTRPRY----NHHYSTGGNHRHRGGGAARHAKTQQDSP 56

Query: 479 LMVTTTYRILCHDVKAGG 532
           L VTT+YRILCHD+KAGG
Sbjct: 57  LTVTTSYRILCHDLKAGG 74


>gb|ESW08501.1| hypothetical protein PHAVU_009G051000g [Phaseolus vulgaris]
          Length = 644

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGR--KMQDPSL 481
           M+RSRSKR YYY+QDYDS+ + RT+ RY    N+HY+         GGG R  K QD  L
Sbjct: 1   MERSRSKRNYYYEQDYDSETVARTRPRY----NHHYSAGAGNHRHRGGGARHAKAQDSQL 56

Query: 482 MVTTTYRILCHDVKAGG 532
            VTT+YRILCHD+KAGG
Sbjct: 57  SVTTSYRILCHDMKAGG 73


>dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
          Length = 660

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHY-----APTHHRRPVSGGGGR---K 463
           M+RSRSKR Y+YDQDYD D++PR+K RY+   NYH+         +R    GGGG     
Sbjct: 1   MERSRSKRNYHYDQDYDGDSMPRSKPRYN--NNYHFGGGGGGNNRYRGGGGGGGGNGRPS 58

Query: 464 MQDPSLMVTTTYRILCHDVKAGG 532
              P  M TTTYRILCHD KAGG
Sbjct: 59  KSHPETMATTTYRILCHDAKAGG 81


>ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|332008916|gb|AED96299.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
          Length = 198

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHY-----APTHHRRPVSGGGGR---K 463
           M+RSRSKR Y+YDQDYD D++PR+K RY+   NYH+         +R    GGGG     
Sbjct: 1   MERSRSKRNYHYDQDYDGDSMPRSKPRYN--NNYHFGGGGGGNNRYRGGGGGGGGNGRPS 58

Query: 464 MQDPSLMVTTTYRILCHDVKAGG 532
              P  M TTTYRILCHD KAGG
Sbjct: 59  KSHPETMATTTYRILCHDAKAGG 81


>ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|17065220|gb|AAL32764.1| RNA-binding protein-like
           [Arabidopsis thaliana] gi|30725478|gb|AAP37761.1|
           At5g53060 [Arabidopsis thaliana]
           gi|332008915|gb|AED96298.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
          Length = 652

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHY-----APTHHRRPVSGGGGR---K 463
           M+RSRSKR Y+YDQDYD D++PR+K RY+   NYH+         +R    GGGG     
Sbjct: 1   MERSRSKRNYHYDQDYDGDSMPRSKPRYN--NNYHFGGGGGGNNRYRGGGGGGGGNGRPS 58

Query: 464 MQDPSLMVTTTYRILCHDVKAGG 532
              P  M TTTYRILCHD KAGG
Sbjct: 59  KSHPETMATTTYRILCHDAKAGG 81


>gb|EXC21425.1| hypothetical protein L484_011867 [Morus notabilis]
          Length = 1349

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 48/96 (50%), Positives = 56/96 (58%), Gaps = 22/96 (22%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTH----HRRPVSGGGGR----- 460
           M+RSRSKR YYYDQDYDS+ + RT+ RY    N+HY   +    HR  V  GGG      
Sbjct: 1   MERSRSKRNYYYDQDYDSETVVRTRPRY----NHHYGANNNHHRHRGSVGAGGGGGGGVG 56

Query: 461 ------------KMQDPSLMVTTTYRILCHDVKAGG 532
                       + QD SL VTT+YRILCHDVKAGG
Sbjct: 57  GVGGGRVSSNKPQQQDQSLTVTTSYRILCHDVKAGG 92


>ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
           lyrata] gi|297310050|gb|EFH40474.1| hypothetical protein
           ARALYDRAFT_495374 [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 10/84 (11%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAP------THHRRPVSGGGGR--- 460
           M+RSRSKR Y+YDQDYD D++PR+K RY+   NYH+          +R    GGGG    
Sbjct: 1   MERSRSKRNYHYDQDYDGDSMPRSKPRYN--NNYHFGGGGGGGNNRYRGGGGGGGGNGRP 58

Query: 461 KMQDPSLMVTTTYRILCHDVKAGG 532
               P  M TTTYRILCHD KAGG
Sbjct: 59  SKSHPETMATTTYRILCHDAKAGG 82


>ref|XP_006401750.1| hypothetical protein EUTSA_v10012933mg [Eutrema salsugineum]
           gi|557102840|gb|ESQ43203.1| hypothetical protein
           EUTSA_v10012933mg [Eutrema salsugineum]
          Length = 647

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = +2

Query: 311 MDRSRSKR-YYYDQDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGG-----RKMQD 472
           M+RSRSKR Y+YDQDYD D++ R+K RY+   NYH+    + R   GGGG          
Sbjct: 1   MERSRSKRNYHYDQDYDGDSMGRSKPRYNNNNNYHFGGGGNNRYRGGGGGGGNSRPSKSH 60

Query: 473 PSLMVTTTYRILCHDVKAGG 532
           P  M TTTYR+LC D KAGG
Sbjct: 61  PETMATTTYRVLCLDAKAGG 80


>ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus] gi|449517605|ref|XP_004165836.1| PREDICTED: KH
           domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 666

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
 Frame = +2

Query: 311 MDRSRSKR-YYYD-QDYDSDNLPRTKQRYDPRGNYHYAPTHHRRPVSGGGGRKMQDPSLM 484
           M++SRSKR YYYD QD+DSD++ RT+ RY+   N HY   ++R   +     K QD SLM
Sbjct: 1   MEKSRSKRNYYYDHQDFDSDSMGRTRPRYN---NNHYPNNNYRHRGNAVRPSKPQDQSLM 57

Query: 485 VTTTYRILCHDVKAGG 532
           VTTTYRILCHD KAGG
Sbjct: 58  VTTTYRILCHDAKAGG 73


>ref|XP_006491994.1| PREDICTED: KH domain-containing protein At4g18375-like [Citrus
           sinensis]
          Length = 678

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 18/92 (19%)
 Frame = +2

Query: 311 MDRSRSKR-YYYD-QDYDSDNLPRTKQRYD----PRGNYHYAPTHHRRP---------VS 445
           MDRSRSKR YYYD QDYD D + RTK RY+    P  NY +   ++            ++
Sbjct: 1   MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60

Query: 446 GGGGR---KMQDPSLMVTTTYRILCHDVKAGG 532
               R     +DPSLMVTTTYRILCHD+KAGG
Sbjct: 61  NSNNRANSNPKDPSLMVTTTYRILCHDMKAGG 92