BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040134
         (1151 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK29467.1| polyprotein-like [Solanum chilense]                     75   1e-11
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    75   2e-11

>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 75.1 bits (183), Expect(2) = 1e-11
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = +2

Query: 92  KKMASAIRLHL*EDVLNNIINEDSAYRIWTRLECLYMSKRLTNKLYRKKLFYT 250
           +K ASAIRLHL +DV+NNI++E+SA  IWT+LE LYMSK LTNKLY KK  YT
Sbjct: 58  EKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYT 110



 Score = 22.3 bits (46), Expect(2) = 1e-11
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 3  MRDLLI**GLHKAI 44
          M+DLLI  GLHKA+
Sbjct: 25 MKDLLIQQGLHKAL 38


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 74.7 bits (182), Expect(2) = 2e-11
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = +2

Query: 92  KKMASAIRLHL*EDVLNNIINEDSAYRIWTRLECLYMSKRLTNKLYRKKLFY 247
           ++ ASAIRLHL +DV+NNII+ED+A  IWTRLE LYMSK LTNKLY KK  Y
Sbjct: 57  ERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLY 108



 Score = 21.9 bits (45), Expect(2) = 2e-11
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 3  MRDLLI**GLHKAI 44
          MRDLLI  GLHK +
Sbjct: 24 MRDLLIQQGLHKVL 37