BLASTX nr result

ID: Atropa21_contig00040098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040098
         (476 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235498.1| PREDICTED: uncharacterized protein LOC101262...    78   1e-22
ref|XP_006342847.1| PREDICTED: uncharacterized protein LOC102600...    80   4e-13
ref|XP_004145310.1| PREDICTED: uncharacterized protein LOC101222...    61   2e-07
emb|CBI18428.3| unnamed protein product [Vitis vinifera]               60   4e-07
ref|XP_002267835.1| PREDICTED: uncharacterized protein LOC100244...    60   4e-07
gb|EXC33644.1| hypothetical protein L484_013841 [Morus notabilis]      56   4e-06
ref|XP_002310354.2| hypothetical protein POPTR_0007s15240g [Popu...    55   7e-06
ref|XP_006850952.1| hypothetical protein AMTR_s00025p00195930 [A...    55   7e-06
gb|EOY26256.1| Mitochondrial transcription termination factor fa...    55   7e-06
gb|EOY26255.1| Mitochondrial transcription termination factor fa...    55   7e-06

>ref|XP_004235498.1| PREDICTED: uncharacterized protein LOC101262193 [Solanum
           lycopersicum]
          Length = 604

 Score = 77.8 bits (190), Expect(2) = 1e-22
 Identities = 35/43 (81%), Positives = 42/43 (97%)
 Frame = +2

Query: 323 SYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNS 451
           SYYLQ+LGVS++ES+E+ALNSP Y+SMLIDSVR+LDEFSLWNS
Sbjct: 87  SYYLQELGVSHKESIEVALNSPNYVSMLIDSVRELDEFSLWNS 129



 Score = 54.3 bits (129), Expect(2) = 1e-22
 Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
 Frame = +3

Query: 96  KMSSNCLQNYLAFAVVPNSNPQ--PFLFPCHCNT---TNFIQVSHLRCRRKLSFAPLVPL 260
           +M S+CL + L+FAV PNS PQ  P  F CHCNT    N I+   + C +  S+APLVPL
Sbjct: 5   QMFSHCLLSNLSFAV-PNSKPQLFPIRFSCHCNTFFYCNLIRPEQV-CHKLRSYAPLVPL 62

Query: 261 AALGLTEQKT 290
           AA   + ++T
Sbjct: 63  AARSSSSKRT 72


>ref|XP_006342847.1| PREDICTED: uncharacterized protein LOC102600438 [Solanum tuberosum]
          Length = 597

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/110 (45%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
 Frame = +2

Query: 143 PQLKSSTFPFPLPLQYHQF-YTSLSSP--LPPQVEFCATCSACCARSNGTXXXXXXXXXX 313
           P  K   FPFP     + F Y +L  P  +  ++   A      ARS+ +          
Sbjct: 15  PNSKPQLFPFPFSCHCNTFFYCNLIRPEQVCHKLRNFAPLVPLAARSSSSKGIEDTEEVI 74

Query: 314 XXX----SYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNS 451
                  SYYLQ+LGVS++ES+EIALNSP Y+SMLIDSVR+LDEFSLWNS
Sbjct: 75  AEAREAVSYYLQELGVSHKESIEIALNSPNYVSMLIDSVRELDEFSLWNS 124



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
 Frame = +3

Query: 99  MSSNCLQNYLAFAVVPNSNPQ--PFLFPCHCNT---TNFIQVSHLRCRRKLSFAPLVPLA 263
           M S+CL NYL+FAV PNS PQ  PF F CHCNT    N I+   + C +  +FAPLVPLA
Sbjct: 1   MPSHCLLNYLSFAV-PNSKPQLFPFPFSCHCNTFFYCNLIRPEQV-CHKLRNFAPLVPLA 58

Query: 264 A 266
           A
Sbjct: 59  A 59


>ref|XP_004145310.1| PREDICTED: uncharacterized protein LOC101222814 [Cucumis sativus]
           gi|449472883|ref|XP_004153723.1| PREDICTED:
           uncharacterized protein LOC101222366 [Cucumis sativus]
           gi|449514567|ref|XP_004164414.1| PREDICTED:
           uncharacterized LOC101222366 [Cucumis sativus]
          Length = 594

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/45 (55%), Positives = 37/45 (82%)
 Frame = +2

Query: 323 SYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNSWS 457
           S YLQ+ GV  +E++ IA NSP+++ ML+D+VR+LDE S+W+SWS
Sbjct: 86  SEYLQRFGVLEDEAVSIASNSPRFLKMLVDAVRELDETSMWDSWS 130


>emb|CBI18428.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = +2

Query: 323 SYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNSW 454
           S  L++ GVS EES+EIALNSPKY+ ML+D VRDL+E   WN+W
Sbjct: 82  SEILRESGVSEEESVEIALNSPKYVKMLVDGVRDLEE---WNAW 122


>ref|XP_002267835.1| PREDICTED: uncharacterized protein LOC100244378 [Vitis vinifera]
          Length = 601

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = +2

Query: 323 SYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNSW 454
           S  L++ GVS EES+EIALNSPKY+ ML+D VRDL+E   WN+W
Sbjct: 82  SEILRESGVSEEESVEIALNSPKYVKMLVDGVRDLEE---WNAW 122


>gb|EXC33644.1| hypothetical protein L484_013841 [Morus notabilis]
          Length = 597

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/48 (47%), Positives = 36/48 (75%)
 Frame = +2

Query: 332 LQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNSWSTTDDDE 475
           L + GVS E+S  I+ NSP+Y+ ML++ VRDL+E  LW+SW++ ++ E
Sbjct: 85  LCEFGVSEEDSAAISENSPRYVGMLVEGVRDLEELELWSSWNSENEME 132


>ref|XP_002310354.2| hypothetical protein POPTR_0007s15240g [Populus trichocarpa]
           gi|550334946|gb|EEE90804.2| hypothetical protein
           POPTR_0007s15240g [Populus trichocarpa]
          Length = 584

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = +2

Query: 323 SYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNSWSTTDD 469
           S +LQ+ G+S  ES  IALNSPKY  ML DSV+DL+E   W SW +  D
Sbjct: 83  SQFLQEFGISAAESNSIALNSPKYAKMLFDSVKDLEE---WTSWKSGGD 128


>ref|XP_006850952.1| hypothetical protein AMTR_s00025p00195930 [Amborella trichopoda]
           gi|548854623|gb|ERN12533.1| hypothetical protein
           AMTR_s00025p00195930 [Amborella trichopoda]
          Length = 591

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/114 (34%), Positives = 48/114 (42%)
 Frame = +2

Query: 113 PSELFGIRRRPQLKSSTFPFPLPLQYHQFYTSLSSPLPPQVEFCATCSACCARSNGTXXX 292
           P   F I+  P    + F     L Y        SPL P+      C    + S+     
Sbjct: 17  PKRHFSIKTPPLSVKTPF-----LPYFDGTFKWVSPLRPRTPIL--CDNTTSESSNGEEF 69

Query: 293 XXXXXXXXXXSYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNSW 454
                     +  L QL VS EE   IA N PKYI M+ID V +LDE SLW+SW
Sbjct: 70  DESVLAKEAIAEMLLQLEVSEEEVQSIANNCPKYIGMVIDGVHELDELSLWDSW 123


>gb|EOY26256.1| Mitochondrial transcription termination factor family protein,
           putative isoform 2 [Theobroma cacao]
          Length = 586

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = +2

Query: 323 SYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNS 451
           S YLQ LG+S E+S+ IA NSPKY  ML+D V++L+E++ WN+
Sbjct: 76  SEYLQDLGLSLEDSISIASNSPKYTQMLVDGVKELEEWNAWNN 118


>gb|EOY26255.1| Mitochondrial transcription termination factor family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 611

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = +2

Query: 323 SYYLQQLGVSNEESMEIALNSPKYISMLIDSVRDLDEFSLWNS 451
           S YLQ LG+S E+S+ IA NSPKY  ML+D V++L+E++ WN+
Sbjct: 76  SEYLQDLGLSLEDSISIASNSPKYTQMLVDGVKELEEWNAWNN 118


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