BLASTX nr result
ID: Atropa21_contig00040083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040083
(588 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containi... 133 3e-29
ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
gb|ESW03873.1| hypothetical protein PHAVU_011G049000g [Phaseolus... 93 5e-17
ref|XP_004507432.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi... 88 2e-15
emb|CBI32533.3| unnamed protein product [Vitis vinifera] 85 1e-14
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citr... 82 8e-14
ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
gb|EMJ01003.1| hypothetical protein PRUPE_ppa004794mg [Prunus pe... 78 2e-12
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,... 72 8e-11
ref|XP_002306075.1| pentatricopeptide repeat-containing family p... 72 8e-11
ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [A... 71 2e-10
gb|EOX97215.1| Tetratricopeptide repeat (TPR)-like superfamily p... 69 9e-10
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis] 67 3e-09
ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Caps... 65 1e-08
ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutr... 64 3e-08
ref|XP_002462895.1| hypothetical protein SORBIDRAFT_02g033980 [S... 64 3e-08
>ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like isoform X1 [Solanum tuberosum]
gi|565365876|ref|XP_006349624.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X2 [Solanum tuberosum]
Length = 493
Score = 133 bits (335), Expect = 3e-29
Identities = 64/78 (82%), Positives = 68/78 (87%)
Frame = -1
Query: 588 HDIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEK 409
HDIVPRK TYELLIQSLC EGWMEEALKLQVEM+GKGYAP+ EIY+AF DGYIKQ D EK
Sbjct: 416 HDIVPRKTTYELLIQSLCKEGWMEEALKLQVEMVGKGYAPNFEIYSAFIDGYIKQGDEEK 475
Query: 408 TETLRGEMLRNKIACNES 355
ETLR EMLRNKI C +S
Sbjct: 476 AETLRNEMLRNKIPCKDS 493
>ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Solanum lycopersicum]
Length = 495
Score = 127 bits (320), Expect = 2e-27
Identities = 61/78 (78%), Positives = 66/78 (84%)
Frame = -1
Query: 588 HDIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEK 409
HDIVPRK TYELLIQSLC EGWMEEALKLQVEM+GKGY P+ EIY+AF DGYIKQ D EK
Sbjct: 418 HDIVPRKTTYELLIQSLCKEGWMEEALKLQVEMVGKGYEPNFEIYSAFIDGYIKQGDEEK 477
Query: 408 TETLRGEMLRNKIACNES 355
ETLR E+LRN I C +S
Sbjct: 478 AETLRNEVLRNTIPCKDS 495
>gb|ESW03873.1| hypothetical protein PHAVU_011G049000g [Phaseolus vulgaris]
Length = 439
Score = 93.2 bits (230), Expect = 5e-17
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = -1
Query: 588 HDIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEK 409
+D++PR+K+YE+L++ LC EG MEEALKLQ EM+GKG+ P EIY AF DGYI+Q + E
Sbjct: 365 YDLIPREKSYEVLMKGLCFEGRMEEALKLQAEMVGKGFQPKAEIYGAFVDGYIRQGNEEM 424
Query: 408 TETLRGEMLRNKI 370
LR EML+N++
Sbjct: 425 ARALRKEMLQNEM 437
>ref|XP_004507432.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cicer arietinum]
Length = 305
Score = 91.3 bits (225), Expect = 2e-16
Identities = 43/72 (59%), Positives = 55/72 (76%)
Frame = -1
Query: 585 DIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKT 406
D+VP++K+YE LI+ LC EG MEEALKLQ EM+GKG+ P EIY AF DGYI+Q + E
Sbjct: 232 DLVPKEKSYETLIKGLCFEGRMEEALKLQAEMVGKGFQPKSEIYEAFIDGYIRQGNEEMA 291
Query: 405 ETLRGEMLRNKI 370
E LR EML+ ++
Sbjct: 292 EALRKEMLQTQM 303
>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Glycine max]
Length = 487
Score = 87.8 bits (216), Expect = 2e-15
Identities = 39/72 (54%), Positives = 55/72 (76%)
Frame = -1
Query: 585 DIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKT 406
D++P +K+YE LI+ LC +G MEEALK+Q EM+GKG+ P+ EIY AF DGY++ + E
Sbjct: 414 DLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSEIYGAFVDGYVRHGNEEMA 473
Query: 405 ETLRGEMLRNKI 370
E LR EML+N++
Sbjct: 474 EALRKEMLQNQM 485
>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 85.1 bits (209), Expect = 1e-14
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = -1
Query: 585 DIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKT 406
+ PR K+YE LI+ C EG MEEA KLQ EM+GKG+ P+LEIY+AF DGY+KQ + E
Sbjct: 223 EFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYMKQGNKEIA 282
Query: 405 ETLRGEMLRNKIACNES 355
ETLR EM ++ E+
Sbjct: 283 ETLRKEMFETQMQQEEN 299
>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Vitis vinifera]
Length = 492
Score = 85.1 bits (209), Expect = 1e-14
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = -1
Query: 585 DIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKT 406
+ PR K+YE LI+ C EG MEEA KLQ EM+GKG+ P+LEIY+AF DGY+KQ + E
Sbjct: 416 EFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYMKQGNKEIA 475
Query: 405 ETLRGEMLRNKIACNES 355
ETLR EM ++ E+
Sbjct: 476 ETLRKEMFETQMQQEEN 492
>ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citrus clementina]
gi|567861000|ref|XP_006423154.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|567861002|ref|XP_006423155.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|568851351|ref|XP_006479357.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X1 [Citrus sinensis]
gi|568851353|ref|XP_006479358.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X2 [Citrus sinensis]
gi|557525087|gb|ESR36393.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|557525088|gb|ESR36394.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|557525089|gb|ESR36395.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
Length = 494
Score = 82.4 bits (202), Expect = 8e-14
Identities = 38/71 (53%), Positives = 52/71 (73%)
Frame = -1
Query: 582 IVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTE 403
+ P +K+Y LI+ LC EG MEEALK+Q EM+GKG+ PSLEIY++F DGY+K+ + E
Sbjct: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSSFIDGYMKEGNVEMAT 478
Query: 402 TLRGEMLRNKI 370
LR EM N++
Sbjct: 479 MLRKEMFENQV 489
>ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Fragaria vesca subsp. vesca]
Length = 493
Score = 80.1 bits (196), Expect = 4e-13
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1
Query: 576 PRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTETL 397
PR+K+YE LI+ LC +G +EEALKLQ +M+GKG+ P+ EIY AF GY+K+ + E E L
Sbjct: 417 PREKSYEFLIRGLCEQGKLEEALKLQAQMVGKGFKPNSEIYGAFISGYMKEGNMEVAELL 476
Query: 396 RGEMLRNKI 370
R EML ++
Sbjct: 477 RNEMLDTEL 485
>gb|EMJ01003.1| hypothetical protein PRUPE_ppa004794mg [Prunus persica]
Length = 491
Score = 78.2 bits (191), Expect = 2e-12
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = -1
Query: 576 PRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTETL 397
P +K+YE LI+ LC E +EEALKLQ EM+GKG+ P+ EIY+AF GY+KQ + E E L
Sbjct: 421 PTEKSYEFLIRGLCEEEKLEEALKLQAEMVGKGFKPNSEIYSAFISGYMKQGNKEVAERL 480
Query: 396 RGEML 382
R EML
Sbjct: 481 RNEML 485
>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 486
Score = 72.4 bits (176), Expect = 8e-11
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = -1
Query: 567 KTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTETLRGE 388
K+YELLI+ LC +G M+EALKLQ EM+G G+ P+ EIY AF DGY+K + E LR E
Sbjct: 416 KSYELLIKGLCKDGKMDEALKLQAEMVGGGFEPNFEIYGAFIDGYMKLGNEEMAAMLRKE 475
Query: 387 M 385
M
Sbjct: 476 M 476
>ref|XP_002306075.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222849039|gb|EEE86586.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 498
Score = 72.4 bits (176), Expect = 8e-11
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = -1
Query: 576 PRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTETL 397
P K+YELLI LC +G MEEALKLQ EM+GKG+ P+ IY AF +GY+K + E L
Sbjct: 421 PNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAFIEGYVKLGNEEMAAML 480
Query: 396 RGEM 385
R EM
Sbjct: 481 RKEM 484
>ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [Amborella trichopoda]
gi|548860027|gb|ERN17635.1| hypothetical protein
AMTR_s00059p00176060 [Amborella trichopoda]
Length = 511
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/63 (52%), Positives = 45/63 (71%)
Frame = -1
Query: 570 KKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTETLRG 391
+++Y+LLI LC EG +EEAL +Q EM+ +G+ P+++ Y AF DGY K DA K E LR
Sbjct: 440 RESYDLLINGLCAEGKVEEALAVQAEMVCRGFGPNIQTYRAFIDGYAKLGDANKAEKLRK 499
Query: 390 EML 382
EML
Sbjct: 500 EML 502
>gb|EOX97215.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508705320|gb|EOX97216.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508705321|gb|EOX97217.1| Tetratricopeptide repeat
(TPR)-like superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 490
Score = 68.9 bits (167), Expect = 9e-10
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = -1
Query: 582 IVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTE 403
+ P K+Y LI+ LC E MEEALKLQ EM+GKG+ P EIY+ F DGY++Q + +
Sbjct: 415 VYPSGKSYVFLIKGLCEERKMEEALKLQAEMVGKGFKPDPEIYDIFIDGYLRQGNEKMVT 474
Query: 402 TLRGEMLRNK 373
LR E++ +
Sbjct: 475 MLRKEVIETQ 484
>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 68.6 bits (166), Expect = 1e-09
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = -1
Query: 576 PRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTETL 397
P +T+E+LI LC EG +E A KLQ +M+GKG+ P+L+IY +F D Y K+ +AE E L
Sbjct: 430 PTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKEGNAEMVEKL 489
Query: 396 RGEM 385
EM
Sbjct: 490 WKEM 493
>ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
gi|449472579|ref|XP_004153637.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 67.4 bits (163), Expect = 3e-09
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = -1
Query: 576 PRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTETL 397
P +T+E+LI LC EG +E A KLQ +M+G+G+ P+L+IY +F D Y K+ +AE E L
Sbjct: 430 PTMETFEILINELCQEGKIEGAFKLQAQMVGRGFKPNLKIYQSFIDAYTKEGNAEMVEKL 489
Query: 396 RGEM 385
EM
Sbjct: 490 WKEM 493
>gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis]
Length = 476
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = -1
Query: 570 KKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKTETLRG 391
+K+ E L+ LC EG M EALKLQ +M+ +G+ P+ EIY+AF GY++Q + E E LR
Sbjct: 410 RKSLEFLVMGLCQEGKMGEALKLQRQMVSEGFEPNCEIYDAFISGYMEQGNVEMAEKLRM 469
Query: 390 EML 382
EML
Sbjct: 470 EML 472
>ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Capsella rubella]
gi|482567718|gb|EOA31907.1| hypothetical protein
CARUB_v10015136mg [Capsella rubella]
Length = 492
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = -1
Query: 585 DIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKT 406
+ P ++ YELLI+ LC EG ME AL +Q EM+GKG+ PS E Y AF DGY D EKT
Sbjct: 414 EFYPSRECYELLIKRLCEEGKMERALNIQAEMVGKGFKPSQETYRAFIDGYGLAGD-EKT 472
Query: 405 ETL 397
L
Sbjct: 473 SAL 475
>ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutrema salsugineum]
gi|557110641|gb|ESQ50932.1| hypothetical protein
EUTSA_v10022658mg [Eutrema salsugineum]
Length = 495
Score = 63.9 bits (154), Expect = 3e-08
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = -1
Query: 585 DIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKT 406
+ P +K YELLI+ LC E ME AL +Q EM+G+G+ P E Y AF DGY K D E +
Sbjct: 414 EFCPSRKCYELLIKRLCEEWKMERALNIQAEMVGRGFKPCQETYKAFIDGYGKAGDEETS 473
Query: 405 ETLRGEM 385
L E+
Sbjct: 474 SLLAIEL 480
>ref|XP_002462895.1| hypothetical protein SORBIDRAFT_02g033980 [Sorghum bicolor]
gi|241926272|gb|EER99416.1| hypothetical protein
SORBIDRAFT_02g033980 [Sorghum bicolor]
Length = 463
Score = 63.9 bits (154), Expect = 3e-08
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = -1
Query: 585 DIVPRKKTYELLIQSLCMEGWMEEALKLQVEMMGKGYAPSLEIYNAFNDGYIKQRDAEKT 406
+ VP +++YE+LI+ C EG +E A++LQ EM GKG+ E+Y+AF Y K + E
Sbjct: 392 EFVPTRRSYEVLIRGFCGEGEVEVAIRLQAEMAGKGFNAGSEVYHAFISAYEKSENYEMV 451
Query: 405 ETLRGEM 385
E LR EM
Sbjct: 452 EKLRKEM 458