BLASTX nr result
ID: Atropa21_contig00040082
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040082
(554 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containi... 145 6e-33
ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containi... 142 7e-32
gb|ESW03873.1| hypothetical protein PHAVU_011G049000g [Phaseolus... 94 2e-17
ref|XP_004507432.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi... 92 8e-17
emb|CBI32533.3| unnamed protein product [Vitis vinifera] 91 2e-16
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
gb|EMJ01003.1| hypothetical protein PRUPE_ppa004794mg [Prunus pe... 86 8e-15
ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citr... 85 1e-14
ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,... 81 1e-13
ref|XP_002306075.1| pentatricopeptide repeat-containing family p... 77 3e-12
gb|EOX97215.1| Tetratricopeptide repeat (TPR)-like superfamily p... 75 8e-12
ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [A... 75 1e-11
gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis] 71 2e-10
ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Caps... 70 3e-10
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutr... 67 4e-09
ref|XP_004969143.1| PREDICTED: pentatricopeptide repeat-containi... 65 8e-09
>ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like isoform X1 [Solanum tuberosum]
gi|565365876|ref|XP_006349624.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X2 [Solanum tuberosum]
Length = 493
Score = 145 bits (366), Expect = 6e-33
Identities = 69/78 (88%), Positives = 73/78 (93%)
Frame = -1
Query: 554 HDIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKK 375
HDIVPRKTTYE LIQSLCKEGWMEEALKLQ EMVG GYAPN EIYSAFIDGYIKQGD++K
Sbjct: 416 HDIVPRKTTYELLIQSLCKEGWMEEALKLQVEMVGKGYAPNFEIYSAFIDGYIKQGDEEK 475
Query: 374 AETLRDEMLRNMIPCKDN 321
AETLR+EMLRN IPCKD+
Sbjct: 476 AETLRNEMLRNKIPCKDS 493
>ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Solanum lycopersicum]
Length = 495
Score = 142 bits (357), Expect = 7e-32
Identities = 67/78 (85%), Positives = 72/78 (92%)
Frame = -1
Query: 554 HDIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKK 375
HDIVPRKTTYE LIQSLCKEGWMEEALKLQ EMVG GY PN EIYSAFIDGYIKQGD++K
Sbjct: 418 HDIVPRKTTYELLIQSLCKEGWMEEALKLQVEMVGKGYEPNFEIYSAFIDGYIKQGDEEK 477
Query: 374 AETLRDEMLRNMIPCKDN 321
AETLR+E+LRN IPCKD+
Sbjct: 478 AETLRNEVLRNTIPCKDS 495
>gb|ESW03873.1| hypothetical protein PHAVU_011G049000g [Phaseolus vulgaris]
Length = 439
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = -1
Query: 554 HDIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKK 375
+D++PR+ +YE L++ LC EG MEEALKLQAEMVG G+ P EIY AF+DGYI+QG+++
Sbjct: 365 YDLIPREKSYEVLMKGLCFEGRMEEALKLQAEMVGKGFQPKAEIYGAFVDGYIRQGNEEM 424
Query: 374 AETLRDEMLRN 342
A LR EML+N
Sbjct: 425 ARALRKEMLQN 435
>ref|XP_004507432.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cicer arietinum]
Length = 305
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/72 (62%), Positives = 57/72 (79%)
Frame = -1
Query: 551 DIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKA 372
D+VP++ +YE LI+ LC EG MEEALKLQAEMVG G+ P EIY AFIDGYI+QG+++ A
Sbjct: 232 DLVPKEKSYETLIKGLCFEGRMEEALKLQAEMVGKGFQPKSEIYEAFIDGYIRQGNEEMA 291
Query: 371 ETLRDEMLRNMI 336
E LR EML+ +
Sbjct: 292 EALRKEMLQTQM 303
>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Glycine max]
Length = 487
Score = 92.0 bits (227), Expect = 8e-17
Identities = 41/72 (56%), Positives = 57/72 (79%)
Frame = -1
Query: 551 DIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKA 372
D++P + +YE LI+ LC +G MEEALK+QAEMVG G+ PN EIY AF+DGY++ G+++ A
Sbjct: 414 DLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSEIYGAFVDGYVRHGNEEMA 473
Query: 371 ETLRDEMLRNMI 336
E LR EML+N +
Sbjct: 474 EALRKEMLQNQM 485
>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = -1
Query: 551 DIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKA 372
+ PR +YE LI+ C+EG MEEA KLQ+EMVG G+ P LEIYSAFIDGY+KQG+ + A
Sbjct: 223 EFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYMKQGNKEIA 282
Query: 371 ETLRDEMLRNMIPCKDN 321
ETLR EM + ++N
Sbjct: 283 ETLRKEMFETQMQQEEN 299
>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Vitis vinifera]
Length = 492
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = -1
Query: 551 DIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKA 372
+ PR +YE LI+ C+EG MEEA KLQ+EMVG G+ P LEIYSAFIDGY+KQG+ + A
Sbjct: 416 EFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYMKQGNKEIA 475
Query: 371 ETLRDEMLRNMIPCKDN 321
ETLR EM + ++N
Sbjct: 476 ETLRKEMFETQMQQEEN 492
>gb|EMJ01003.1| hypothetical protein PRUPE_ppa004794mg [Prunus persica]
Length = 491
Score = 85.5 bits (210), Expect = 8e-15
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = -1
Query: 542 PRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAETL 363
P + +YE LI+ LC+E +EEALKLQAEMVG G+ PN EIYSAFI GY+KQG+ + AE L
Sbjct: 421 PTEKSYEFLIRGLCEEEKLEEALKLQAEMVGKGFKPNSEIYSAFISGYMKQGNKEVAERL 480
Query: 362 RDEML 348
R+EML
Sbjct: 481 RNEML 485
>ref|XP_006423153.1| hypothetical protein CICLE_v10028281mg [Citrus clementina]
gi|567861000|ref|XP_006423154.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|567861002|ref|XP_006423155.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|568851351|ref|XP_006479357.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X1 [Citrus sinensis]
gi|568851353|ref|XP_006479358.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like isoform X2 [Citrus sinensis]
gi|557525087|gb|ESR36393.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|557525088|gb|ESR36394.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
gi|557525089|gb|ESR36395.1| hypothetical protein
CICLE_v10028281mg [Citrus clementina]
Length = 494
Score = 85.1 bits (209), Expect = 1e-14
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = -1
Query: 548 IVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAE 369
+ P + +Y LI+ LC+EG MEEALK+QAEMVG G+ P+LEIYS+FIDGY+K+G+ + A
Sbjct: 419 LFPTEKSYMFLIKGLCEEGKMEEALKVQAEMVGKGFEPSLEIYSSFIDGYMKEGNVEMAT 478
Query: 368 TLRDEMLRNMI 336
LR EM N +
Sbjct: 479 MLRKEMFENQV 489
>ref|XP_004289840.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Fragaria vesca subsp. vesca]
Length = 493
Score = 85.1 bits (209), Expect = 1e-14
Identities = 40/65 (61%), Positives = 53/65 (81%)
Frame = -1
Query: 542 PRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAETL 363
PR+ +YE LI+ LC++G +EEALKLQA+MVG G+ PN EIY AFI GY+K+G+ + AE L
Sbjct: 417 PREKSYEFLIRGLCEQGKLEEALKLQAQMVGKGFKPNSEIYGAFISGYMKEGNMEVAELL 476
Query: 362 RDEML 348
R+EML
Sbjct: 477 RNEML 481
>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 486
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = -1
Query: 530 TYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAETLRDEM 351
+YE LI+ LCK+G M+EALKLQAEMVG G+ PN EIY AFIDGY+K G+++ A LR EM
Sbjct: 417 SYELLIKGLCKDGKMDEALKLQAEMVGGGFEPNFEIYGAFIDGYMKLGNEEMAAMLRKEM 476
>ref|XP_002306075.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222849039|gb|EEE86586.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 498
Score = 77.0 bits (188), Expect = 3e-12
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = -1
Query: 542 PRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAETL 363
P +YE LI LC++G MEEALKLQ+EMVG G+ PN IY AFI+GY+K G+++ A L
Sbjct: 421 PNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAFIEGYVKLGNEEMAAML 480
Query: 362 RDEM 351
R EM
Sbjct: 481 RKEM 484
>gb|EOX97215.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508705320|gb|EOX97216.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508705321|gb|EOX97217.1| Tetratricopeptide repeat
(TPR)-like superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 490
Score = 75.5 bits (184), Expect = 8e-12
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = -1
Query: 548 IVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAE 369
+ P +Y LI+ LC+E MEEALKLQAEMVG G+ P+ EIY FIDGY++QG++K
Sbjct: 415 VYPSGKSYVFLIKGLCEERKMEEALKLQAEMVGKGFKPDPEIYDIFIDGYLRQGNEKMVT 474
Query: 368 TLRDEML 348
LR E++
Sbjct: 475 MLRKEVI 481
>ref|XP_006856168.1| hypothetical protein AMTR_s00059p00176060 [Amborella trichopoda]
gi|548860027|gb|ERN17635.1| hypothetical protein
AMTR_s00059p00176060 [Amborella trichopoda]
Length = 511
Score = 75.1 bits (183), Expect = 1e-11
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = -1
Query: 536 KTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAETLRD 357
+ +Y+ LI LC EG +EEAL +QAEMV G+ PN++ Y AFIDGY K GD KAE LR
Sbjct: 440 RESYDLLINGLCAEGKVEEALAVQAEMVCRGFGPNIQTYRAFIDGYAKLGDANKAEKLRK 499
Query: 356 EML 348
EML
Sbjct: 500 EML 502
>gb|EXB63632.1| hypothetical protein L484_026974 [Morus notabilis]
Length = 476
Score = 71.2 bits (173), Expect = 2e-10
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = -1
Query: 536 KTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAETLRD 357
+ + E L+ LC+EG M EALKLQ +MV G+ PN EIY AFI GY++QG+ + AE LR
Sbjct: 410 RKSLEFLVMGLCQEGKMGEALKLQRQMVSEGFEPNCEIYDAFISGYMEQGNVEMAEKLRM 469
Query: 356 EML 348
EML
Sbjct: 470 EML 472
>ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Capsella rubella]
gi|482567718|gb|EOA31907.1| hypothetical protein
CARUB_v10015136mg [Capsella rubella]
Length = 492
Score = 70.5 bits (171), Expect = 3e-10
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = -1
Query: 551 DIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKA 372
+ P + YE LI+ LC+EG ME AL +QAEMVG G+ P+ E Y AFIDGY GD+K +
Sbjct: 414 EFYPSRECYELLIKRLCEEGKMERALNIQAEMVGKGFKPSQETYRAFIDGYGLAGDEKTS 473
Query: 371 ETLRDEMLRNM 339
L EM ++
Sbjct: 474 ALLAIEMAESL 484
>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -1
Query: 542 PRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAETL 363
P T+E LI LC+EG +E A KLQA+MVG G+ PNL+IY +FID Y K+G+ + E L
Sbjct: 430 PTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKEGNAEMVEKL 489
Query: 362 RDEM 351
EM
Sbjct: 490 WKEM 493
>ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
gi|449472579|ref|XP_004153637.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -1
Query: 542 PRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAETL 363
P T+E LI LC+EG +E A KLQA+MVG G+ PNL+IY +FID Y K+G+ + E L
Sbjct: 430 PTMETFEILINELCQEGKIEGAFKLQAQMVGRGFKPNLKIYQSFIDAYTKEGNAEMVEKL 489
Query: 362 RDEM 351
EM
Sbjct: 490 WKEM 493
>ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutrema salsugineum]
gi|557110641|gb|ESQ50932.1| hypothetical protein
EUTSA_v10022658mg [Eutrema salsugineum]
Length = 495
Score = 66.6 bits (161), Expect = 4e-09
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = -1
Query: 551 DIVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKA 372
+ P + YE LI+ LC+E ME AL +QAEMVG G+ P E Y AFIDGY K GD++ +
Sbjct: 414 EFCPSRKCYELLIKRLCEEWKMERALNIQAEMVGRGFKPCQETYKAFIDGYGKAGDEETS 473
Query: 371 ETLRDEMLRNM 339
L E+ ++
Sbjct: 474 SLLAIELAESL 484
>ref|XP_004969143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X1 [Setaria italica]
gi|514778620|ref|XP_004969144.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X2 [Setaria italica]
gi|514778623|ref|XP_004969145.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X3 [Setaria italica]
gi|514778626|ref|XP_004969146.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X4 [Setaria italica]
gi|514778629|ref|XP_004969147.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like isoform X5 [Setaria italica]
Length = 814
Score = 65.5 bits (158), Expect = 8e-09
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = -1
Query: 548 IVPRKTTYEHLIQSLCKEGWMEEALKLQAEMVGIGYAPNLEIYSAFIDGYIKQGDDKKAE 369
+ P TY L+ C++G M+EALKL +EM G G+ PN Y+ + GYIK+ KA
Sbjct: 432 VKPSIVTYHSLLLGYCEKGCMDEALKLYSEMPGKGFTPNEVTYTTLMKGYIKKNAFDKAY 491
Query: 368 TLRDEMLRNMIPCKD 324
+L DEM +N + C D
Sbjct: 492 SLLDEMHQNGVSCND 506