BLASTX nr result

ID: Atropa21_contig00040072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00040072
         (675 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597...   125   2e-26
ref|XP_004242981.1| PREDICTED: receptor-like protein 12-like [So...    69   1e-09
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A...    59   2e-06
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A...    58   2e-06
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...    58   3e-06
emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]    57   4e-06

>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
          Length = 305

 Score =  125 bits (313), Expect = 2e-26
 Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 6/79 (7%)
 Frame = -3

Query: 673 ESWNLWRVDKAIKKIWNMVPACIFWCIWLEKNRRCFDGESTSLGILKARCI------ANL 512
           ESW+LW+VDKAIKKIW M+PACIFW IWLE+N+RCFDGEST+LGILK RC        NL
Sbjct: 227 ESWSLWKVDKAIKKIWIMIPACIFWSIWLERNKRCFDGESTALGILKTRCTENLFSWTNL 286

Query: 511 YPIISAEHLQDFINSLALA 455
           YP ++AE LQDF NSLALA
Sbjct: 287 YPAVNAEQLQDFTNSLALA 305


>ref|XP_004242981.1| PREDICTED: receptor-like protein 12-like [Solanum lycopersicum]
          Length = 1035

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 35/50 (70%), Positives = 39/50 (78%)
 Frame = +1

Query: 190 IFNRPSLKYLMLRSKKLTSQLKEFRYKSLYVLDVGDFKLHEPIPISFSKL 339
           IFN PSLKYL+LR  +LT QLKE RY  L V+DVGD KL+ PIP SFSKL
Sbjct: 424 IFNLPSLKYLVLRGNQLTGQLKEVRYNLLEVVDVGDNKLNGPIPTSFSKL 473


>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Solanum tuberosum]
          Length = 284

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
 Frame = -3

Query: 673 ESWNLWRVDKAIKKIWNMVPACIFWCIWLEKNRRCFDGESTSLGILKARCIANL------ 512
           +SW      K+ K+ W ++P+CI+W +W E+N RCFD  S S+  +K  CI +L      
Sbjct: 209 KSWVRRGSTKSQKRWWRLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSLLFLCKQ 268

Query: 511 YPIISAEHLQDFINSL 464
             I+  + + D I SL
Sbjct: 269 LCIVDTDQIVDLIGSL 284


>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Solanum tuberosum]
          Length = 284

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
 Frame = -3

Query: 673 ESWNLWRVDKAIKKIWNMVPACIFWCIWLEKNRRCFDGESTSLGILKARCIANL------ 512
           +SW      K+ K+ W ++P+CI+W +W E+N RCFD  S S+  +K  CI +L      
Sbjct: 209 KSWVRRGGTKSQKRWWRLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSLLFWCKQ 268

Query: 511 YPIISAEHLQDFINSL 464
             I+  + + D I SL
Sbjct: 269 LCIVDTDQIVDLIGSL 284


>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 517

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
 Frame = -3

Query: 673 ESWNLWRVDKAIKKIWNMVPACIFWCIWLEKNRRCFDGESTSLGILKARCIANL------ 512
           +SW      K+ K+ W ++P+CI+W +W E+N RCFD  S S+  +K  CI +L      
Sbjct: 442 KSWVRRGSTKSQKRWWRLIPSCIWWSVWKERNNRCFDNRSNSIHKVKWNCIVSLLFWCKQ 501

Query: 511 YPIISAEHLQDFINSL 464
             I+  + + D I +L
Sbjct: 502 LCIVDTDQIVDLIGNL 517


>emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]
          Length = 939

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 22/53 (41%), Positives = 32/53 (60%)
 Frame = -3

Query: 667  WNLWRVDKAIKKIWNMVPACIFWCIWLEKNRRCFDGESTSLGILKARCIANLY 509
            W+ + + K  +K+W   P+CIFW +W E+NR  FD E  SL  LK   + NL+
Sbjct: 863  WSGFNMGKKRRKVWKAAPSCIFWAVWKERNRIAFDNEELSLNXLKNSFVCNLW 915


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