BLASTX nr result
ID: Atropa21_contig00040004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00040004
(756 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004242268.1| PREDICTED: putative pentatricopeptide repeat... 200 4e-49
ref|XP_006357376.1| PREDICTED: putative pentatricopeptide repeat... 198 1e-48
ref|XP_004506936.1| PREDICTED: putative pentatricopeptide repeat... 111 2e-22
ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat... 109 1e-21
ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266... 108 1e-21
emb|CBI35955.3| unnamed protein product [Vitis vinifera] 108 1e-21
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera] 108 1e-21
gb|EXC09150.1| hypothetical protein L484_005106 [Morus notabilis] 103 5e-20
gb|ESW22515.1| hypothetical protein PHAVU_005G159300g [Phaseolus... 103 6e-20
ref|XP_006426561.1| hypothetical protein CICLE_v10027602mg [Citr... 103 6e-20
gb|EMJ18357.1| hypothetical protein PRUPE_ppa001759mg [Prunus pe... 102 1e-19
ref|XP_006466019.1| PREDICTED: putative pentatricopeptide repeat... 98 3e-18
ref|XP_002527400.1| pentatricopeptide repeat-containing protein,... 94 6e-17
ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat... 89 2e-15
ref|NP_173207.1| pentatricopeptide repeat-containing protein [Ar... 88 3e-15
ref|XP_002890240.1| pentatricopeptide repeat-containing protein ... 87 8e-15
ref|XP_006303549.1| hypothetical protein CARUB_v10011006mg [Caps... 84 4e-14
ref|XP_006416685.1| hypothetical protein EUTSA_v10009551mg [Eutr... 81 3e-13
ref|XP_006585261.1| PREDICTED: pentatricopeptide repeat-containi... 80 6e-13
ref|XP_004301227.1| PREDICTED: pentatricopeptide repeat-containi... 80 7e-13
>ref|XP_004242268.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Solanum lycopersicum]
Length = 730
Score = 200 bits (509), Expect = 4e-49
Identities = 96/104 (92%), Positives = 100/104 (96%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
S MTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD
Sbjct: 627 SGMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 686
Query: 575 SEMEDVHIMLNILSLHMAKERCTPQKSFSLQCAKEQEDYMYLTS 444
SEMEDVHIMLNILSLHMAKE CTPQKSF++QCA+EQEDY+Y S
Sbjct: 687 SEMEDVHIMLNILSLHMAKEGCTPQKSFAMQCAEEQEDYLYYAS 730
>ref|XP_006357376.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like isoform X1 [Solanum tuberosum]
gi|565382079|ref|XP_006357377.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g17630-like isoform X2 [Solanum tuberosum]
gi|565382081|ref|XP_006357378.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g17630-like isoform X3 [Solanum tuberosum]
Length = 727
Score = 198 bits (504), Expect = 1e-48
Identities = 95/101 (94%), Positives = 99/101 (98%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
S MTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD
Sbjct: 627 SGMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 686
Query: 575 SEMEDVHIMLNILSLHMAKERCTPQKSFSLQCAKEQEDYMY 453
SEMEDVHIMLNILSLHMAKE CTP+KSF+LQCA+EQEDY+Y
Sbjct: 687 SEMEDVHIMLNILSLHMAKEGCTPRKSFALQCAEEQEDYLY 727
>ref|XP_004506936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cicer arietinum]
Length = 716
Score = 111 bits (278), Expect = 2e-22
Identities = 54/104 (51%), Positives = 71/104 (68%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
SE+TGS+MLL N+YA NGRW+DSA VR+SAK +GLKK PGQSWIEV+KKVY F AG +
Sbjct: 613 SEITGSFMLLSNIYAANGRWEDSAKVRVSAKKKGLKKIPGQSWIEVRKKVYTFSAGNVVH 672
Query: 575 SEMEDVHIMLNILSLHMAKERCTPQKSFSLQCAKEQEDYMYLTS 444
E E+++ +L+ L L MA E F QC +Q + + +
Sbjct: 673 LEQEEIYAILDELMLQMAGENYNISSCFDQQCICDQSKLLLVAN 716
>ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 109 bits (272), Expect = 1e-21
Identities = 50/80 (62%), Positives = 65/80 (81%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
S++TGS+MLL N+YA NGRW DSA VR+SA+T+GLKK PGQSWIEV+KKVY F AG +
Sbjct: 610 SKITGSFMLLSNIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVH 669
Query: 575 SEMEDVHIMLNILSLHMAKE 516
+ED++++L L+LHMA E
Sbjct: 670 FGLEDIYVILEELNLHMASE 689
>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 108 bits (271), Expect = 1e-21
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
SE+ GSYMLL N+YA +GRW+DSA VRISAKT+GLKK PGQSWI+VKKKVYMF AG
Sbjct: 1449 SEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQH 1508
Query: 575 SEMEDVHIMLNILSLHMAKERCTP 504
+E+E+V+ +L L L M E P
Sbjct: 1509 AELEEVYRILKDLGLQMEVEGYIP 1532
>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 108 bits (271), Expect = 1e-21
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
SE+ GSYMLL N+YA +GRW+DSA VRISAKT+GLKK PGQSWI+VKKKVYMF AG
Sbjct: 611 SEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQH 670
Query: 575 SEMEDVHIMLNILSLHMAKERCTP 504
+E+E+V+ +L L L M E P
Sbjct: 671 AELEEVYRILKDLGLQMEVEGYIP 694
>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 108 bits (271), Expect = 1e-21
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
SE+ GSYMLL N+YA +GRW+DSA VRISAKT+GLKK PGQSWI+VKKKVYMF AG
Sbjct: 611 SEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQH 670
Query: 575 SEMEDVHIMLNILSLHMAKERCTP 504
+E+E+V+ +L L L M E P
Sbjct: 671 AELEEVYRILKDLGLQMEVEGYIP 694
>gb|EXC09150.1| hypothetical protein L484_005106 [Morus notabilis]
Length = 782
Score = 103 bits (258), Expect = 5e-20
Identities = 53/97 (54%), Positives = 69/97 (71%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
SE TGSYMLL N+YA +GRW++SA VRISAKT+GL+K PGQSWIEV KKVY+F AG+
Sbjct: 678 SEGTGSYMLLSNIYAASGRWEESARVRISAKTKGLRKTPGQSWIEVNKKVYVFSAGKAAH 737
Query: 575 SEMEDVHIMLNILSLHMAKERCTPQKSFSLQCAKEQE 465
+ +E V +L+ L+L + E P SLQ ++E
Sbjct: 738 TGLESVCGILHRLALQVESEGHVPHGRISLQNVDDKE 774
>gb|ESW22515.1| hypothetical protein PHAVU_005G159300g [Phaseolus vulgaris]
Length = 704
Score = 103 bits (257), Expect = 6e-20
Identities = 49/80 (61%), Positives = 63/80 (78%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
S++TGS MLL N+YA NGRW D A VR+SA+T+GLKK PGQSWIEV+KKVY F AG +
Sbjct: 622 SKITGSIMLLSNIYAANGRWDDFARVRMSARTKGLKKIPGQSWIEVRKKVYTFSAGNLLH 681
Query: 575 SEMEDVHIMLNILSLHMAKE 516
M++V+++L L+LHMA E
Sbjct: 682 LGMDEVYVILEELALHMATE 701
>ref|XP_006426561.1| hypothetical protein CICLE_v10027602mg [Citrus clementina]
gi|557528551|gb|ESR39801.1| hypothetical protein
CICLE_v10027602mg [Citrus clementina]
Length = 930
Score = 103 bits (257), Expect = 6e-20
Identities = 48/90 (53%), Positives = 66/90 (73%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
+E TGSYMLL N+YA +GRW+D+A VRISAKT+GLKK GQSWIEVK+K++MF +G +
Sbjct: 613 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 672
Query: 575 SEMEDVHIMLNILSLHMAKERCTPQKSFSL 486
S++++V +L L+L M + C P L
Sbjct: 673 SDLKNVCEVLEELALQMENKGCVPDNDIIL 702
>gb|EMJ18357.1| hypothetical protein PRUPE_ppa001759mg [Prunus persica]
Length = 769
Score = 102 bits (255), Expect = 1e-19
Identities = 51/86 (59%), Positives = 62/86 (72%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
SE+TGSYMLL N+YA +G+W+DSA VRISAKT+GLKK GQSWIEVK KV+MF AG
Sbjct: 629 SEITGSYMLLSNIYAASGKWEDSAKVRISAKTKGLKKIRGQSWIEVKNKVFMFSAGNTTQ 688
Query: 575 SEMEDVHIMLNILSLHMAKERCTPQK 498
+E +H +L L+L M E P K
Sbjct: 689 GGLELIHGILKDLALQMESEGYIPDK 714
>ref|XP_006466019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Citrus sinensis]
Length = 712
Score = 97.8 bits (242), Expect = 3e-18
Identities = 47/90 (52%), Positives = 64/90 (71%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
+E TGSYMLL N+YA +GRW+D+A VRISAKT+GLKK GQSWIEVK+K+ MF +G +
Sbjct: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKINMFSSGNSLQ 671
Query: 575 SEMEDVHIMLNILSLHMAKERCTPQKSFSL 486
S++++V +L L+L M + P L
Sbjct: 672 SDLKNVCEVLEELALQMENKGYVPDNDIIL 701
>ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533210|gb|EEF34966.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 621
Score = 93.6 bits (231), Expect = 6e-17
Identities = 45/79 (56%), Positives = 56/79 (70%)
Frame = -2
Query: 752 EMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMDS 573
E TG+YMLL N+YA +GRW+DSA VR SAKT+GLKK PGQSWI+V+K VY F AG M
Sbjct: 520 ETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEKNVYTFSAGNNMQR 579
Query: 572 EMEDVHIMLNILSLHMAKE 516
E + +L L+ M +E
Sbjct: 580 GFEQIFEILEELTFQMERE 598
>ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 89.0 bits (219), Expect = 2e-15
Identities = 43/77 (55%), Positives = 58/77 (75%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
S++TGS+MLL N++A + RW+DSA VRISA+ +GLKK PG SWIEVKKKVYMF AG +
Sbjct: 615 SKITGSHMLLSNIFAASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMFKAGYTIS 674
Query: 575 SEMEDVHIMLNILSLHM 525
+E V +L+ L+ +
Sbjct: 675 EGLEKVDEILHDLAFQI 691
>ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g17630 gi|8778465|gb|AAF79473.1|AC022492_17
F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 88.2 bits (217), Expect = 3e-15
Identities = 43/79 (54%), Positives = 54/79 (68%)
Frame = -2
Query: 752 EMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMDS 573
E TGSYMLL N+Y+ GRW++SANVR AK + LKK G SWIEVKKK Y F +G + S
Sbjct: 635 ERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQS 694
Query: 572 EMEDVHIMLNILSLHMAKE 516
E E ++ +L L HM K+
Sbjct: 695 EFETIYPVLEDLVSHMLKK 713
>ref|XP_002890240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336082|gb|EFH66499.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 763
Score = 86.7 bits (213), Expect = 8e-15
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = -2
Query: 752 EMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMDS 573
E TGSYMLL N+Y+ GRW++SA VR AK + LKK G SWIE+KKK+Y F +G + S
Sbjct: 635 ERTGSYMLLSNIYSAGGRWEESAKVRALAKKKDLKKVSGSSWIELKKKIYKFSSGSIVQS 694
Query: 572 EMEDVHIMLNILSLHMAKE 516
E ++ +L L HM KE
Sbjct: 695 EFASIYPVLEDLVSHMVKE 713
>ref|XP_006303549.1| hypothetical protein CARUB_v10011006mg [Capsella rubella]
gi|482572260|gb|EOA36447.1| hypothetical protein
CARUB_v10011006mg [Capsella rubella]
Length = 728
Score = 84.3 bits (207), Expect = 4e-14
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = -2
Query: 752 EMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMDS 573
E TG YMLL N+Y+ G+W++SA VR SAK + LKK G SWIE+KKK Y F +G + S
Sbjct: 635 ERTGGYMLLSNIYSAGGKWEESAKVRTSAKKKDLKKVSGSSWIELKKKSYKFSSGTIVQS 694
Query: 572 EMEDVHIMLNILSLHMAKERCT 507
E ++++L L HM K+ T
Sbjct: 695 EFASIYLVLEDLVSHMLKKTPT 716
>ref|XP_006416685.1| hypothetical protein EUTSA_v10009551mg [Eutrema salsugineum]
gi|557094456|gb|ESQ35038.1| hypothetical protein
EUTSA_v10009551mg [Eutrema salsugineum]
Length = 731
Score = 81.3 bits (199), Expect = 3e-13
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = -2
Query: 752 EMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMDS 573
EMTGSYMLL N Y+ +GRW++SA VR AK + LKK G SWI +KK VY F +G + S
Sbjct: 635 EMTGSYMLLSNTYSASGRWEESAKVRALAKKKDLKKVSGSSWIVLKKIVYKFSSGSAVQS 694
Query: 572 EMEDVHIMLNILSLHMAKERCTP 504
+ ++ ++ L HM K+ TP
Sbjct: 695 DFASIYPVVEDLVSHMWKKGPTP 717
>ref|XP_006585261.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X3 [Glycine max]
Length = 571
Score = 80.5 bits (197), Expect = 6e-13
Identities = 31/85 (36%), Positives = 52/85 (61%)
Frame = -2
Query: 746 TGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMDSEM 567
+G+Y++L N+YA G+WKD +R+ K QG+KK SW+++ K + F+ G P +
Sbjct: 485 SGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNKTHYFVGGDPSHPNI 544
Query: 566 EDVHIMLNILSLHMAKERCTPQKSF 492
D+H+ L ++LHM ++ C Q F
Sbjct: 545 NDIHVALRRITLHMKEDHCKRQTQF 569
>ref|XP_004301227.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like [Fragaria vesca subsp. vesca]
Length = 808
Score = 80.1 bits (196), Expect = 7e-13
Identities = 41/97 (42%), Positives = 58/97 (59%)
Frame = -2
Query: 755 SEMTGSYMLLCNLYAVNGRWKDSANVRISAKTQGLKKAPGQSWIEVKKKVYMFLAGQPMD 576
SE TG+ +LL N+Y+ GRW D+A+VRI K QGLKK+PG SW+E+ ++ FL G
Sbjct: 636 SEGTGNLVLLSNMYSSVGRWDDAAHVRIKQKDQGLKKSPGCSWVEINGVIHGFLGGDQSH 695
Query: 575 SEMEDVHIMLNILSLHMAKERCTPQKSFSLQCAKEQE 465
E +H L L + M + + SF LQ +E+E
Sbjct: 696 PESAQIHEKLEELLVDMKEMGYCAENSFVLQDVEEEE 732