BLASTX nr result

ID: Atropa21_contig00039902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00039902
         (892 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232597.1| PREDICTED: protein transport protein Sec24-l...    67   7e-14
ref|XP_006364827.1| PREDICTED: protein transport protein Sec24-l...    63   7e-13

>ref|XP_004232597.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
           [Solanum lycopersicum]
          Length = 1051

 Score = 66.6 bits (161), Expect(2) = 7e-14
 Identities = 40/91 (43%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +2

Query: 623 QSSTPFKSSGSVVGPDASAFRHAXXXXXXXXXXXXX-GAMVGAEASAFRTIPSGMPNGAA 799
           QS+TPF+SS  VVG DASAFR A              G MVG   S+FR +P GMPN A 
Sbjct: 24  QSTTPFQSSRPVVGSDASAFRPAPPTSSPAMPPPSSSGPMVGPGISSFRPMPPGMPNDAG 83

Query: 800 RXXXXXXXXXXXXAAGLYQQFPAPQFSSIAQ 892
           R             +G + +FP+PQF S AQ
Sbjct: 84  RPPPTSTPPYGPTVSGPFPRFPSPQFPSTAQ 114



 Score = 37.7 bits (86), Expect(2) = 7e-14
 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 559 MGTEYPNSPAIPLRP-ASPFSVPEFNT 636
           MGTEYPN P  P RP A+PF VP+  T
Sbjct: 1   MGTEYPNRPTFPSRPAATPFGVPQSTT 27


>ref|XP_006364827.1| PREDICTED: protein transport protein Sec24-like At3g07100-like
           isoform X1 [Solanum tuberosum]
           gi|565398533|ref|XP_006364828.1| PREDICTED: protein
           transport protein Sec24-like At3g07100-like isoform X2
           [Solanum tuberosum]
          Length = 1047

 Score = 63.2 bits (152), Expect(2) = 7e-13
 Identities = 39/90 (43%), Positives = 46/90 (51%)
 Frame = +2

Query: 623 QSSTPFKSSGSVVGPDASAFRHAXXXXXXXXXXXXXGAMVGAEASAFRTIPSGMPNGAAR 802
           QS+TPF+SS  VVG DASAFR A             G MVG   S FR +P GMPN A R
Sbjct: 24  QSTTPFQSSRPVVGSDASAFRPA--PPTSSPAMSSSGPMVGPGISTFRPMPPGMPNDAGR 81

Query: 803 XXXXXXXXXXXXAAGLYQQFPAPQFSSIAQ 892
                        +  + +FP+PQF S AQ
Sbjct: 82  PPPTATPPYGPTVSVPFPRFPSPQFPSTAQ 111



 Score = 37.7 bits (86), Expect(2) = 7e-13
 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 559 MGTEYPNSPAIPLRP-ASPFSVPEFNT 636
           MGTEYPN P  P RP A+PF VP+  T
Sbjct: 1   MGTEYPNRPTFPSRPAATPFGVPQSTT 27


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