BLASTX nr result
ID: Atropa21_contig00039866
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00039866
(948 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT39281.2| Integrase core domain containing protein [Solanum... 52 6e-13
emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera] 50 1e-11
gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum] 47 3e-10
ref|XP_004247314.1| PREDICTED: uncharacterized protein LOC101256... 58 2e-08
ref|XP_004237641.1| PREDICTED: uncharacterized protein LOC101258... 58 3e-08
emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera] 44 6e-08
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 42 6e-06
>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
Length = 1760
Score = 52.4 bits (124), Expect(2) = 6e-13
Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +2
Query: 158 TSIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLS---RPTINVAIAGPSLHMWLRRL 328
TSIEFFP ++ VKDL+ G N+ GL EWP S P NV + LH+W RRL
Sbjct: 390 TSIEFFPFSYCVKDLSTGAPLFRGQNRDGLYEWPLGSAHHTPQCNVVV---PLHLWHRRL 446
Query: 329 GH 334
GH
Sbjct: 447 GH 448
Score = 48.9 bits (115), Expect(2) = 6e-13
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +1
Query: 28 SQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDNLT 153
S TG T+L A N FKL N LC+ +IK L+S+S+FC+DN T
Sbjct: 349 SHTGNTNLSASNQQFKLLNTLCSHSIKNNLLSVSKFCRDNHT 390
>emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]
Length = 1099
Score = 50.1 bits (118), Expect(2) = 1e-11
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +2
Query: 161 SIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLSRPTINVAIAGPSLHMWLRRLGHTI 340
SIEF P FLVKD+ TT L G K G+ EWP +S P + + +L W +RLGH
Sbjct: 474 SIEFLPTAFLVKDIQTRTTLLKGNTKDGVYEWP-ISPPLLAFSSRKTTLSEWHQRLGHPT 532
Query: 341 LEFI 352
+ +
Sbjct: 533 FKIL 536
Score = 46.6 bits (109), Expect(2) = 1e-11
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +1
Query: 13 SNYSKSQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDN 147
S S + G++ L +N FKL NVLC P +K LISISQFC N
Sbjct: 427 SGLSITHIGSSSLHTTHNTFKLNNVLCVPTMKKNLISISQFCTSN 471
>gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum]
Length = 878
Score = 47.0 bits (110), Expect(2) = 3e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1
Query: 10 DSNYSKSQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDNLT 153
D + G T ++A N+ F + N LCAP+IK LIS+++ C DNLT
Sbjct: 275 DKTIPITNAGLTQIKASNSNFMISNTLCAPSIKKNLISVAKICTDNLT 322
Score = 45.1 bits (105), Expect(2) = 3e-10
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 155 VTSIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLSR--PTINVAIAGPSLHMWLRRL 328
+TSI F P +FL+KDL + G NK GL EWP + P+ N S +W RRL
Sbjct: 321 LTSINFLPHSFLMKDLKTRRLLVQGRNKHGLYEWPQRNHVSPSANFTSTKVSRQLWHRRL 380
>ref|XP_004247314.1| PREDICTED: uncharacterized protein LOC101256706 [Solanum
lycopersicum]
Length = 391
Score = 58.2 bits (139), Expect(2) = 2e-08
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1
Query: 28 SQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDNL 150
S TG+T L A NN FKL + LCAP+IK KLIS+S+FC+DNL
Sbjct: 246 SHTGSTKLNASNNVFKLTHTLCAPSIKRKLISVSKFCQDNL 286
Score = 27.7 bits (60), Expect(2) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 161 SIEFFPPNFLVKDL 202
SIEFFP NF+VKDL
Sbjct: 288 SIEFFPFNFVVKDL 301
>ref|XP_004237641.1| PREDICTED: uncharacterized protein LOC101258251 [Solanum
lycopersicum]
Length = 368
Score = 57.8 bits (138), Expect(2) = 3e-08
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +1
Query: 28 SQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDNL 150
S TG+T L A NN FKL LCAP+IK KLIS+S+FC+DNL
Sbjct: 260 SHTGSTKLNASNNVFKLTRTLCAPSIKRKLISVSKFCQDNL 300
Score = 27.7 bits (60), Expect(2) = 3e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 161 SIEFFPPNFLVKDL 202
SIEFFP NF+VKDL
Sbjct: 302 SIEFFPFNFVVKDL 315
>emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]
Length = 631
Score = 44.3 bits (103), Expect(2) = 6e-08
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 161 SIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLSRPTINVAIAGPSLHMWLRRLGHTI 340
SIEF P LVKD+ T L G K G+ EWP +S P + + +L W +RLGH
Sbjct: 96 SIEFLPTALLVKDIQTGITLLKGNTKDGVNEWP-VSPPLLAFSSLKTTLSEWHQRLGHPA 154
Query: 341 LEFI 352
+ +
Sbjct: 155 FKIL 158
Score = 40.0 bits (92), Expect(2) = 6e-08
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1
Query: 13 SNYSKSQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDN 147
S S + TG++ L +N FKL NVL P +K LISISQF N
Sbjct: 49 SGLSITHTGSSSLHTTHNTFKLNNVLYVPTMKKNLISISQFGTSN 93
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 42.4 bits (98), Expect(2) = 6e-06
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = +2
Query: 161 SIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLSRPTINVAIAGPSLHMWLRRLGH 334
SI F P +FLVKDL T L G K G+ EW +S P + + S W RLGH
Sbjct: 315 SITFLPSSFLVKDLRTGATLLKGKTKDGVYEW-LVSSPLLAFSSVKTSSSEWHHRLGH 371
Score = 35.0 bits (79), Expect(2) = 6e-06
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 28 SQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDN 147
+ TG+ L N F L NVLC P +K LISIS+ N
Sbjct: 273 THTGSLSLHTSNAQFSLTNVLCVPGMKKNLISISKLXISN 312