BLASTX nr result
ID: Atropa21_contig00039866
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00039866 (948 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT39281.2| Integrase core domain containing protein [Solanum... 52 6e-13 emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera] 50 1e-11 gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum] 47 3e-10 ref|XP_004247314.1| PREDICTED: uncharacterized protein LOC101256... 58 2e-08 ref|XP_004237641.1| PREDICTED: uncharacterized protein LOC101258... 58 3e-08 emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera] 44 6e-08 emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 42 6e-06 >gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum] Length = 1760 Score = 52.4 bits (124), Expect(2) = 6e-13 Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Frame = +2 Query: 158 TSIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLS---RPTINVAIAGPSLHMWLRRL 328 TSIEFFP ++ VKDL+ G N+ GL EWP S P NV + LH+W RRL Sbjct: 390 TSIEFFPFSYCVKDLSTGAPLFRGQNRDGLYEWPLGSAHHTPQCNVVV---PLHLWHRRL 446 Query: 329 GH 334 GH Sbjct: 447 GH 448 Score = 48.9 bits (115), Expect(2) = 6e-13 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = +1 Query: 28 SQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDNLT 153 S TG T+L A N FKL N LC+ +IK L+S+S+FC+DN T Sbjct: 349 SHTGNTNLSASNQQFKLLNTLCSHSIKNNLLSVSKFCRDNHT 390 >emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera] Length = 1099 Score = 50.1 bits (118), Expect(2) = 1e-11 Identities = 27/64 (42%), Positives = 36/64 (56%) Frame = +2 Query: 161 SIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLSRPTINVAIAGPSLHMWLRRLGHTI 340 SIEF P FLVKD+ TT L G K G+ EWP +S P + + +L W +RLGH Sbjct: 474 SIEFLPTAFLVKDIQTRTTLLKGNTKDGVYEWP-ISPPLLAFSSRKTTLSEWHQRLGHPT 532 Query: 341 LEFI 352 + + Sbjct: 533 FKIL 536 Score = 46.6 bits (109), Expect(2) = 1e-11 Identities = 23/45 (51%), Positives = 28/45 (62%) Frame = +1 Query: 13 SNYSKSQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDN 147 S S + G++ L +N FKL NVLC P +K LISISQFC N Sbjct: 427 SGLSITHIGSSSLHTTHNTFKLNNVLCVPTMKKNLISISQFCTSN 471 >gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum] Length = 878 Score = 47.0 bits (110), Expect(2) = 3e-10 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = +1 Query: 10 DSNYSKSQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDNLT 153 D + G T ++A N+ F + N LCAP+IK LIS+++ C DNLT Sbjct: 275 DKTIPITNAGLTQIKASNSNFMISNTLCAPSIKKNLISVAKICTDNLT 322 Score = 45.1 bits (105), Expect(2) = 3e-10 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +2 Query: 155 VTSIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLSR--PTINVAIAGPSLHMWLRRL 328 +TSI F P +FL+KDL + G NK GL EWP + P+ N S +W RRL Sbjct: 321 LTSINFLPHSFLMKDLKTRRLLVQGRNKHGLYEWPQRNHVSPSANFTSTKVSRQLWHRRL 380 >ref|XP_004247314.1| PREDICTED: uncharacterized protein LOC101256706 [Solanum lycopersicum] Length = 391 Score = 58.2 bits (139), Expect(2) = 2e-08 Identities = 27/41 (65%), Positives = 33/41 (80%) Frame = +1 Query: 28 SQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDNL 150 S TG+T L A NN FKL + LCAP+IK KLIS+S+FC+DNL Sbjct: 246 SHTGSTKLNASNNVFKLTHTLCAPSIKRKLISVSKFCQDNL 286 Score = 27.7 bits (60), Expect(2) = 2e-08 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +2 Query: 161 SIEFFPPNFLVKDL 202 SIEFFP NF+VKDL Sbjct: 288 SIEFFPFNFVVKDL 301 >ref|XP_004237641.1| PREDICTED: uncharacterized protein LOC101258251 [Solanum lycopersicum] Length = 368 Score = 57.8 bits (138), Expect(2) = 3e-08 Identities = 27/41 (65%), Positives = 32/41 (78%) Frame = +1 Query: 28 SQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDNL 150 S TG+T L A NN FKL LCAP+IK KLIS+S+FC+DNL Sbjct: 260 SHTGSTKLNASNNVFKLTRTLCAPSIKRKLISVSKFCQDNL 300 Score = 27.7 bits (60), Expect(2) = 3e-08 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +2 Query: 161 SIEFFPPNFLVKDL 202 SIEFFP NF+VKDL Sbjct: 302 SIEFFPFNFVVKDL 315 >emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera] Length = 631 Score = 44.3 bits (103), Expect(2) = 6e-08 Identities = 25/64 (39%), Positives = 34/64 (53%) Frame = +2 Query: 161 SIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLSRPTINVAIAGPSLHMWLRRLGHTI 340 SIEF P LVKD+ T L G K G+ EWP +S P + + +L W +RLGH Sbjct: 96 SIEFLPTALLVKDIQTGITLLKGNTKDGVNEWP-VSPPLLAFSSLKTTLSEWHQRLGHPA 154 Query: 341 LEFI 352 + + Sbjct: 155 FKIL 158 Score = 40.0 bits (92), Expect(2) = 6e-08 Identities = 22/45 (48%), Positives = 27/45 (60%) Frame = +1 Query: 13 SNYSKSQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDN 147 S S + TG++ L +N FKL NVL P +K LISISQF N Sbjct: 49 SGLSITHTGSSSLHTTHNTFKLNNVLYVPTMKKNLISISQFGTSN 93 >emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] Length = 1172 Score = 42.4 bits (98), Expect(2) = 6e-06 Identities = 25/58 (43%), Positives = 30/58 (51%) Frame = +2 Query: 161 SIEFFPPNFLVKDLTVLTTFLCGPNKAGL*EWPSLSRPTINVAIAGPSLHMWLRRLGH 334 SI F P +FLVKDL T L G K G+ EW +S P + + S W RLGH Sbjct: 315 SITFLPSSFLVKDLRTGATLLKGKTKDGVYEW-LVSSPLLAFSSVKTSSSEWHHRLGH 371 Score = 35.0 bits (79), Expect(2) = 6e-06 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = +1 Query: 28 SQTGTTHLRA*NNAFKLPNVLCAPAIKCKLISISQFCKDN 147 + TG+ L N F L NVLC P +K LISIS+ N Sbjct: 273 THTGSLSLHTSNAQFSLTNVLCVPGMKKNLISISKLXISN 312