BLASTX nr result
ID: Atropa21_contig00039662
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00039662 (636 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006344845.1| PREDICTED: F-box protein At5g03970-like [Sol... 102 9e-20 ref|XP_004231290.1| PREDICTED: F-box protein At5g03970-like [Sol... 99 1e-18 ref|XP_006340137.1| PREDICTED: F-box protein At3g26010-like isof... 74 5e-11 >ref|XP_006344845.1| PREDICTED: F-box protein At5g03970-like [Solanum tuberosum] Length = 380 Score = 102 bits (254), Expect = 9e-20 Identities = 61/117 (52%), Positives = 67/117 (57%), Gaps = 18/117 (15%) Frame = -1 Query: 306 GVVEVPEXXXXXILHRLPSKSLARFKCVSKCWLKYI---------------PQQHLIGFF 172 GVVEV + ILHRLPSKSLARFKCVSKCW KYI PQ +LIGFF Sbjct: 12 GVVEVSDDIVINILHRLPSKSLARFKCVSKCWRKYIADSSLSYSCRSRRWRPQPYLIGFF 71 Query: 171 YQAR---EAGXXXXXXXXXXXXXXXRANLDESVNFLDRRVYIVASSNAFLLCNSQRV 10 YQAR E ++ D+SV+FL R YIVASSN FLLCN QRV Sbjct: 72 YQARDTCERSKIQFFFSSEESSLDIDSSFDQSVSFLGRSAYIVASSNGFLLCNRQRV 128 >ref|XP_004231290.1| PREDICTED: F-box protein At5g03970-like [Solanum lycopersicum] Length = 379 Score = 98.6 bits (244), Expect = 1e-18 Identities = 59/116 (50%), Positives = 64/116 (55%), Gaps = 18/116 (15%) Frame = -1 Query: 306 GVVEVPEXXXXXILHRLPSKSLARFKCVSKCWLKYI---------------PQQHLIGFF 172 G VEV + ILH LPSKSLARFKCVSKCWLKYI PQ +LIGFF Sbjct: 12 GAVEVSDDIVINILHCLPSKSLARFKCVSKCWLKYIADSSLSYSCRYRRWRPQPYLIGFF 71 Query: 171 YQAR---EAGXXXXXXXXXXXXXXXRANLDESVNFLDRRVYIVASSNAFLLCNSQR 13 YQAR E + D+SV+FL R YIVASSN FLLCN QR Sbjct: 72 YQARDTCERSKIQFFFSSEESALDIDGSFDQSVSFLGRSAYIVASSNGFLLCNKQR 127 >ref|XP_006340137.1| PREDICTED: F-box protein At3g26010-like isoform X1 [Solanum tuberosum] gi|565346168|ref|XP_006340138.1| PREDICTED: F-box protein At3g26010-like isoform X2 [Solanum tuberosum] Length = 378 Score = 73.6 bits (179), Expect = 5e-11 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 10/95 (10%) Frame = -1 Query: 267 LHRLPSKSLARFKCVSKCWLKYI----------PQQHLIGFFYQAREAGXXXXXXXXXXX 118 L+RLP KSL +FKC+SK W KYI P+ +L+GFF + + Sbjct: 20 LNRLPLKSLEKFKCISKNWRKYIAEIYRRRFQWPEPYLLGFFCLEKRS-QSCFFYSSKES 78 Query: 117 XXXXRANLDESVNFLDRRVYIVASSNAFLLCNSQR 13 ++LDESVNF+ +VYIVASSN FLLCN R Sbjct: 79 PLVIGSSLDESVNFIGEKVYIVASSNGFLLCNKLR 113